New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3277819 =NA (NA)13 (0.100) 8/162 NT NA noncoding (1/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3277844 = NA (NA)noncoding (26/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 207 total aligned reads displayed.

GGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATG  >  NC_000913/3277745‑3277943
                                                                                                   |                                                                                                   
ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCg                                                                                                     >  1:1006634/1‑100 (MQ=255)
 gACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCgg                                                                                                    <  2:3846507/100‑1 (MQ=255)
  gcggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccgctggtcaacacgaatgcgttcggcggg                                                                                                   <  1:3132342‑M2/3‑1 (MQ=255)
  gcggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCggg                                                                                                   >  1:1766766‑M1/73‑100 (MQ=255)
   cggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccgctggtcaacacgaatgcgttcggcGGGc                                                                                                  <  1:1245868‑M2/4‑1 (MQ=255)
   cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGc                                                                                                  >  1:2323566/1‑100 (MQ=255)
   cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGc                                                                                                  <  1:514004/100‑1 (MQ=255)
    aTCCTCGTGCAGACGGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                                                 <  2:338682/100‑1 (MQ=255)
    aTCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                                                 <  1:3401522/100‑1 (MQ=255)
     tcctccTGCCGACTGGGACACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                                                 <  2:2288040/99‑1 (MQ=255)
     gatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCAt                                                                                                >  1:1073671‑M1/70‑100 (MQ=255)
     gatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCAt                                                                                                >  1:2411389‑M1/70‑100 (MQ=255)
        agcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCt                                                                                             >  1:655881‑M1/67‑100 (MQ=255)
            gCCGACTGGGAAACCCTCACCCGAGAAACAGGAGAAACCCATGGATGCTGTTCACAATGCCCGCCTAACGCACTCGTGTTGACCACCGGGAATCCTGtct                                                                                         >  2:1427864/1‑100 (MQ=255)
              cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCa                                                                                       <  2:3204830/100‑1 (MQ=255)
               gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCAc                                                                                      <  1:660089/100‑1 (MQ=255)
               gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCAc                                                                                      <  1:2689267/100‑1 (MQ=255)
               aaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCAc                                                                                      >  2:2582711‑M1/60‑100 (MQ=255)
                aggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                                                     >  1:60702‑M1/59‑100 (MQ=255)
                aCTGGGAAACCCTGACCCGAGAAACAGAAGAAACCCACTGATGGTGTTCCAAATGCCCGCCGAACGCATTCGTGTTTACCAAAGAGCATCATctct                                                                                         >  2:2197390/1‑96 (MQ=255)
                aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                                                     <  1:2993908/100‑1 (MQ=255)
                 cTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTc                                                                                    >  2:2973348/1‑100 (MQ=255)
                  tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                                                   >  1:211251/1‑100 (MQ=255)
                   gggAAACCCTCACCCGAGCAACAGACGAACCCCATTGATGCTGTTCACAATGCCCGCCGCACGCATTCCTGTTGACCCGCGGGCATCCTTTCCCACTccc                                                                                  >  2:1868453/1‑100 (MQ=255)
                   gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                                                  >  2:2620816/1‑100 (MQ=255)
                   gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                                                  <  2:1579830/100‑1 (MQ=255)
                     gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                                                >  1:3516164/1‑100 (MQ=255)
                         cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCa                                                                            <  2:2961497/100‑1 (MQ=255)
                            tCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGaa                                                                         <  1:3269757/100‑1 (MQ=255)
                            tCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGaa                                                                         <  1:971598/100‑1 (MQ=255)
                              aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                                                       <  1:3799058/100‑1 (MQ=255)
                               cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                                                      >  2:1432596/1‑100 (MQ=255)
                               cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                                                      >  2:532937/1‑100 (MQ=255)
                                 cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                                                    <  1:224485/100‑1 (MQ=255)
                                  gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGAATCCTTTCTCACTCCCCGACCAGAATCACtt                                                                   >  1:2085481/1‑100 (MQ=255)
                                      aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                                               >  1:3173166/1‑100 (MQ=255)
                                      aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                                               >  1:3418295/1‑100 (MQ=255)
                                       aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                                              >  1:2708440/1‑100 (MQ=255)
                                          gaagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCa                                                           >  1:358628/1‑100 (MQ=255)
                                             gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                                                        <  1:1060248/100‑1 (MQ=255)
                                             gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                                                        >  2:309972/1‑100 (MQ=255)
                                             gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                                                        >  2:3892844/1‑100 (MQ=255)
                                               aaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCtt                                                      >  1:313141/1‑100 (MQ=255)
                                               aaCCCATTGATGATGTGCTGAATGTTCGCCCAACGCATTCGTGTTTACAAGCGGGGATCCCTGCTCTATCCACCGCCAGAAAAACTTCAACCCCAGcc                                                        >  2:661344/1‑98 (MQ=255)
                                                aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                                                     >  2:4037092/1‑100 (MQ=255)
                                                 cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTc                                                    <  2:1189333/100‑1 (MQ=255)
                                                  ccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                                                   <  1:2811359/100‑1 (MQ=255)
                                                  ccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                                                   >  1:1479226/1‑100 (MQ=255)
                                                   cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                                                  <  1:3637713/100‑1 (MQ=255)
                                                   cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                                                  <  1:2635506/100‑1 (MQ=255)
                                                   cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                                                  <  1:4122567/100‑1 (MQ=255)
                                                    aTTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCCTTCTCACTCCCCGACCAGCATCACTTCAACCCCAGCCTTTCGc                                                  >  2:3352328/1‑99 (MQ=255)
                                                     ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                                                <  2:20864/100‑1 (MQ=255)
                                                     ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                                                <  2:358625/100‑1 (MQ=255)
                                                       gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                                              >  1:811735/1‑100 (MQ=255)
                                                         tGGTGTTCACAAAGCCCGCCGAACGCATTAGTGTTGACCAGCGGGCAACCTTTACCACTCCCCGCACAAACTCACTTCAATCCCACCCGTTCGCAGTCCt                                            >  2:81297/1‑100 (MQ=255)
                                                            tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc                                         <  1:2525361/100‑1 (MQ=255)
                                                             agaaaggatgcccgctggtcaacacgaatgcgttcggcGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCa                                        >  2:4129223‑M2/39‑100 (MQ=255)
                                                              ttCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg                                       >  2:2173967/1‑100 (MQ=255)
                                                              gaaaggatgcccgctggtcaacacgaatgcgttcggcGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg                                       >  2:2809163‑M2/38‑100 (MQ=255)
                                                               tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg                                      <  2:1832961/100‑1 (MQ=255)
                                                                cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCCCTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc                                     <  1:1337761/100‑1 (MQ=255)
                                                                cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc                                     >  1:1110765/1‑100 (MQ=255)
                                                                cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc                                     >  2:254867/1‑100 (MQ=255)
                                                                cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc                                     >  2:1163004/1‑100 (MQ=255)
                                                                cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc                                     >  1:744137/1‑100 (MQ=255)
                                                                  caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa                                   >  1:1369028/1‑100 (MQ=255)
                                                                  caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa                                   >  2:3735849/1‑100 (MQ=255)
                                                                  caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa                                   >  1:1794380/1‑100 (MQ=255)
                                                                   gatgcccgctggtcaacacgaatgcgttcggcGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTAt                                  >  2:420545‑M2/33‑100 (MQ=255)
                                                                   gatgcccgctggtcaacacgaatgcgttcggcGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGCCTAt                                  >  2:2454375‑M2/33‑100 (MQ=255)
                                                                    atgcccgctggtcaacacgaatgcgttcggcGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATc                                 >  2:2102050‑M2/32‑100 (MQ=255)
                                                                    atgcccgctggtcaacacgaatgcgttcggcGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATc                                 >  1:1233930‑M2/32‑100 (MQ=255)
                                                                     tgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATcc                                >  1:1489327‑M1/6‑100 (MQ=255)
                                                                      gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg                               <  2:1319450‑M1/96‑1 (MQ=255)
                                                                       cccgctggtcaacacgaatgcgttcggcGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc                              >  1:1900886‑M2/29‑100 (MQ=255)
                                                                       cccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc                              <  2:2572982‑M1/97‑1 (MQ=255)
                                                                        ccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCa                             >  1:1852234‑M1/3‑100 (MQ=255)
                                                                          GCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAgg                           >  2:2026444‑M1/1‑100 (MQ=255)
                                                                            cgAACGCATTCGTGTTGACCAGCGTGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGaa                         <  2:1716121/100‑1 (MQ=255)
                                                                             gAACGCATTCGTCTTGTCCAGCGTGCATCCTTTCTCGCTCCCGGACCAGAATCACTTCAACCCCAGCCTTTCGTAGTCCTTCCAGGCTATCCGCAGGAAt                        <  2:1354878/100‑1 (MQ=255)
                                                                               aCGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGc                      >  2:1108530/1‑100 (MQ=255)
                                                                                  cATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCtt                   >  1:1588520/1‑100 (MQ=255)
                                                                                   aTTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtc                  <  1:1523582/100‑1 (MQ=255)
                                                                                   aTTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtc                  <  2:687295/100‑1 (MQ=255)
                                                                                    ttCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtca                 <  1:3371823/100‑1 (MQ=255)
                                                                                    ttCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtca                 <  1:1300696/100‑1 (MQ=255)
                                                                                     tCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtcat                <  1:911490/100‑1 (MQ=255)
                                                                                      cGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtcatc               <  1:3764921/100‑1 (MQ=255)
                                                                                       gtgtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtcatca              >  1:1893667/1‑100 (MQ=255)
                                                                                        tgtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaa             <  1:2876604/100‑1 (MQ=255)
                                                                                         gtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaac            >  2:2451663/1‑100 (MQ=255)
                                                                                          ttGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaaca           <  2:2742794/100‑1 (MQ=255)
                                                                                           tGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATTCGCAGGAATGCCTTCATcaacaa          <  1:1493925/100‑1 (MQ=255)
                                                                                              ccAGCGGGCATCCTTTCTCAGTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCCGGCATGCCTTCATCAACAATGa       >  2:2527094/1‑100 (MQ=255)
                                                                                               cAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGAt      <  1:1651289/100‑1 (MQ=255)
                                                                                               cAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGAt      <  2:3378857/100‑1 (MQ=255)
                                                                                                aGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTGCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATc     <  1:323461/100‑1 (MQ=255)
                                                                                                aGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATAATc     >  2:2925936/1‑100 (MQ=255)
                                                                                                   GGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATg  <  1:720650‑M2/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATG  >  NC_000913/3277745‑3277943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.