| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3296997 = | NA (NA) | 16 (0.110) | 11/168 | NT | NA | intergenic (+13/+101) | yraP/yraQ | outer membrane lipoprotein/putative inner membrane permease |
| ? | NC_000913 | 3297033 = | NA (NA) | noncoding (35/84 nt) | REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 231 total aligned reads displayed.
GAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCA > NC_000913/3296898‑3297095 | gAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCTGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTaa < 2:2470788/100‑1 (MQ=255)gAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTaa > 1:2000396/1‑100 (MQ=255)gAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTaa > 2:3943262/1‑100 (MQ=255) aCGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATg < 2:127661/100‑1 (MQ=255) cGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGc > 2:2125100/1‑100 (MQ=255) cGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGc > 2:4085586/1‑100 (MQ=255) gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGATCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc < 2:2728539/100‑1 (MQ=255) gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc < 2:3800697/100‑1 (MQ=255) gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc < 1:1190887/100‑1 (MQ=255) gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc > 2:810231/1‑100 (MQ=255) tGAAGCGAAAGCGGCGGCAGATATTGCCAGTCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt < 2:2293680/100‑1 (MQ=255) tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt < 1:2448817/100‑1 (MQ=255) tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGCCGTTTACGTTTATTAAATAGCAGCTCCTTGTAATGCCt < 2:2554394/100‑1 (MQ=255) gAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTg < 1:4109744/100‑1 (MQ=255) gAAGCGAAAACGGACGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTGCGGCGTGTCAGCTGATTAAATAGCAGCCCCTTGTAATGcc > 2:1344154/1‑98 (MQ=255) aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGAt > 1:197436/1‑100 (MQ=255) aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGAt < 1:2534161/100‑1 (MQ=255) aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTGACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGAt > 2:1428020/1‑100 (MQ=255) gCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATg > 1:240324/1‑100 (MQ=255) cGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGc < 2:602547/100‑1 (MQ=255) naaaGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCg > 1:3187935/2‑100 (MQ=255) gAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCg > 1:3125111/1‑100 (MQ=255) aaaGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGa < 1:75293/100‑1 (MQ=255) aaaGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTAGTAAATAGCAGCCCCTTGTAATGCCTGAt < 2:714283/96‑1 (MQ=255) aaGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGAc < 1:1764721/100‑1 (MQ=255) aGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACg > 2:3709793/1‑100 (MQ=255) gctgcggcAGATATTGCCAGCCGGGTGAGCGGCGTGCAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGCAATGCCTGATGCGAc < 1:1059445/95‑1 (MQ=255) gcggcgGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGc < 1:3970690/100‑1 (MQ=255) ggcAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGcc > 1:3736854/1‑100 (MQ=255) cAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCcgc < 2:2968736/100‑1 (MQ=255) gATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGt > 1:1623672/1‑100 (MQ=255) atatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTc < 1:10244/100‑1 (MQ=255) atatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTc < 1:14026/100‑1 (MQ=255) atatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTc < 1:2816/100‑1 (MQ=255) tatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCt < 1:2264309/100‑1 (MQ=255) tatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCt > 1:3816421/1‑100 (MQ=255) atTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCtt > 2:3081052/1‑100 (MQ=255) atTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCtt > 1:2830830/1‑100 (MQ=255) gCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATc > 1:1181098/1‑100 (MQ=255) gCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATc > 1:3480372/1‑100 (MQ=255) gCCAGCCGGGAGAGCGGCGTGAAGCGGCTAACTCCGGCGTTTCCGTATATTCAACAGCAGCCCCTTACCATGCCCGATGCGACCCTCGCCCCCTCTCAt > 2:3426053/1‑99 (MQ=255) ctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaG‑GCCTGATGCGACGCTTGCCGCGTCTTATCa > 1:3512794‑M1/70‑100 (MQ=255) ccAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCa > 1:2740233/1‑100 (MQ=255) gatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaG‑GCCTGATAAGACGCTTGCCGCGTCTTATCAgg > 2:2671266‑M1/68‑100 (MQ=255) cAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 1:1428030/100‑1 (MQ=255) atttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaG‑GCCTGATGCGACGCTTGCCGCGTCTTATCAGGc > 1:2699529‑M1/67‑100 (MQ=255) atttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaG‑GCCGGATGCGACGCTTGCCGCGTCTTATCAgg > 2:3272944‑M1/67‑99 (MQ=255) atgggagggaaaacatgtcggatgcggcgtagacgccttatctgagctacggtttgtatcgttgtaG‑GCCTGATGCGACGCTTGCCGCGTCTTATCAGGc > 2:2026620‑M1/67‑100 (MQ=255) tttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaG‑GCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc > 1:817792‑M1/66‑100 (MQ=255) gCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 2:853843/99‑1 (MQ=255) tcGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc < 1:90070/99‑1 (MQ=255) ccGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc < 1:2201136/100‑1 (MQ=255) cGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt > 2:347575/1‑100 (MQ=255) gagggaaaacatgtcggatgcggcgtaaacgccttatcggacctacggtttgtatcgttgtaG‑GCCTGATGCGACGCTTGCCGCGGCTTATCAGGCCTAc > 2:1747335‑M1/63‑100 (MQ=255) ngTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc > 2:492180/2‑100 (MQ=255) ggcgAGGGGCTTTAAGCGGGTAACTACGGCGTGTACGGTTACTAAATAGCACCCCCTTCAAACGCCCGATGAGCGGCTTGCCGCGCCTTATCTGGCCTa > 2:2888265/4‑99 (MQ=255) ggTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc < 2:3347477/100‑1 (MQ=255) ggTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc < 2:1623809/100‑1 (MQ=255) agggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc > 2:886784‑M1/62‑100 (MQ=255) gTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc < 2:3580157/99‑1 (MQ=255) tGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGTCGCTTGCCGCGTCTTATCAGGCCTACaa > 2:1937495/1‑100 (MQ=255) cggcgTGAAGCGGGTAACGACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGAt < 1:3280703/100‑1 (MQ=255) aacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGAt > 1:2051671‑M1/56‑100 (MQ=255) gcgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATAc < 1:1839859/100‑1 (MQ=255) gTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACaa < 2:1383424/100‑1 (MQ=255) gAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAc > 2:2574940/1‑100 (MQ=255) aaGCGGGTAACTACGACGTTTCCGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAc < 2:2417388/99‑1 (MQ=255) aGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCg < 1:1626426/100‑1 (MQ=255) cGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTa < 1:3431109/100‑1 (MQ=255) gggTAACTACGGCGTTTACGTTTATTAAATAGCAGCACCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAg > 1:1000458/1‑100 (MQ=255) ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAgg < 1:1551232/100‑1 (MQ=255) ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAgg < 1:1794616/100‑1 (MQ=255) ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAgg < 2:1081339/100‑1 (MQ=255) aCTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAg < 2:1118988/100‑1 (MQ=255) cTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGCCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGa < 2:2206341/100‑1 (MQ=255) cGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATaa > 1:326362/1‑100 (MQ=255) cGGCGTTTACGTTTATTAAATAGCAGCACCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATaa > 2:1458025/1‑100 (MQ=255) ggCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAg < 1:3084742/100‑1 (MQ=255) gCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAgg > 1:3383060/1‑100 (MQ=255) ttacgtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGtt < 1:2160277/100‑1 (MQ=255) acgtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATGCAAACCGTAGGTCGGATAAGGCGTTTa < 1:412144/100‑1 (MQ=255) cgtttaTTAACTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAc > 2:1561528/1‑100 (MQ=255) tttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcg < 1:949449/99‑1 (MQ=255) ttaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCa > 1:3652861/1‑100 (MQ=255) aaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATcc > 1:66918/1‑100 (MQ=255) tAGCAGCCCTGTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGa < 2:2612639/100‑1 (MQ=255) agcaggCCCTTGTAACGCCTGATGCAACCCTTGCCCCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGAc < 1:3249742/100‑1 (MQ=25) gcagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACa > 1:1101808/1‑100 (MQ=255) gcCCCTTGTAATGCCTGATGCCACGCTTGCCGCGTCTTATCAGTCCTACAACGATACAAACCGTACGTCAGATAAGGCTTTTACGCCGCATCCGACAt > 2:426117/1‑98 (MQ=25) ccccTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGtt < 1:442637/100‑1 (MQ=255) cccTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGttt > 1:1489126/1‑100 (MQ=255) cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc < 1:3669308/100‑1 (MQ=255) cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc < 2:1237277/100‑1 (MQ=255) ttgtaATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTcc > 1:1201467‑M1/6‑100 (MQ=255) ttgtaATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc > 2:2829765‑M1/6‑99 (MQ=255) tgtaATGCTTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTccc > 2:3467872‑M1/5‑100 (MQ=255) taATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTccc > 1:3957700‑M1/3‑98 (MQ=255) taATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTc < 1:2046182‑M1/98‑1 (MQ=255) aATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCa > 2:4068378‑M1/2‑100 (MQ=255) aATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCa > 2:2308860‑M1/2‑100 (MQ=255) | GAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCA > NC_000913/3296898‑3297095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |