New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3546221NA (NA)12 (0.090) 8/166 NT NA intergenic (+22/‑338) nfuA/gntT Fe/S biogenesis protein, putative scaffold/chaperone protein/gluconate transporter, high‑affinity GNT I system
?NC_000913 = 3546253 NA (NA)noncoding (32/36 nt) REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 218 total aligned reads displayed.

TGCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGC  >  NC_000913/3546123‑3546320
                                                                                                  |                                                                                                   
tgctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTg                                                                                                    >  1:324730‑M1/1‑99 (MQ=255)
 gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   >  2:1825039‑M1/1‑98 (MQ=255)
 gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   >  1:4031343‑M1/1‑98 (MQ=255)
 gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   >  1:1355931‑M1/1‑98 (MQ=255)
 gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   <  2:3740277‑M1/100‑3 (MQ=255)
  ctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcc                                                                                                  <  2:2025734‑M1/100‑4 (MQ=255)
   tgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgccc                                                                                                 >  2:850295‑M1/1‑96 (MQ=255)
    gAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccg                                                                                                >  2:3362783‑M1/1‑95 (MQ=255)
    gAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgccc                                                                                                 >  2:247523‑M1/1‑95 (MQ=255)
     aaCGAATTCCCGGAGCTGAAAGGTGTGCGCTATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccga                                                                                               <  1:3901928‑M1/100‑7 (MQ=255)
     aaCCAATCCCCGGCGCTGAAACGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgccc                                                                                                 <  2:3384970‑M1/98‑5 (MQ=255)
      actaaTTCCCGGAGCTGAAATGTGTGCGCTATCTCACCGAACACCAGCGCGGCTAACACTCTTACTACTAAGTTATCCCCTCTTGTCTAGATTGCCCGAt                                                                                              <  2:2550900/97‑1 (MQ=255)
        gAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGc                                                                                            <  1:1719602/100‑1 (MQ=255)
        gAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGc                                                                                            <  2:2920277/100‑1 (MQ=255)
         aaTTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCg                                                                                           >  2:32652/1‑100 (MQ=255)
         aaTTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCg                                                                                           >  2:3156659/1‑100 (MQ=255)
          aTTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGa                                                                                          >  2:1355927/1‑100 (MQ=255)
            tCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACg                                                                                        >  2:941576/1‑100 (MQ=255)
             cccGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGc                                                                                       >  1:3891355/1‑100 (MQ=255)
             cccGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGc                                                                                       <  2:2080366/100‑1 (MQ=255)
              ccGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCt                                                                                      >  2:2706432/1‑100 (MQ=255)
                ggAGCTGAAAGGTGTCAGCGATCTCACCGAACACGAACGCCGCGAACTCTCCTACTTCTAAGTTATCCCCTCTTTTGTATATTGCCCGATg                                                                                             <  2:2624699/91‑1 (MQ=255)
                  aGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAg                                                                                  <  1:1001609/100‑1 (MQ=255)
                    cTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCg                                                                                <  1:583555/100‑1 (MQ=255)
                     tGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGt                                                                               >  2:3285447/1‑100 (MQ=255)
                     tGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGt                                                                               <  2:733285/100‑1 (MQ=255)
                      gAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTc                                                                              >  2:4123582/1‑100 (MQ=255)
                         aGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCAtt                                                                           <  1:3201476/100‑1 (MQ=255)
                            tgtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTC                                                                         >  2:1775840‑M2/1‑99 (MQ=255)
                             gtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGG                                                                       >  2:1491101‑M2/1‑100 (MQ=255)
                             gtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCG                                                                        <  2:3888626‑M2/99‑1 (MQ=255)
                              tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgatgcgacgctttagcgtcgcatcggg                                                                      <  1:4109088‑M1/100‑32 (MQ=255)
                              tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  2:1924151‑M2/1‑100 (MQ=255)
                              tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTAGCCCCTGTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  2:3990852‑M2/1‑100 (MQ=255)
                               gcgcGATCTCACCGAACATCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcggg                                                                      <  2:2017232‑M1/99‑32 (MQ=255)
                               gcgcGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTCAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      <  2:2858057‑M2/99‑1 (MQ=255)
                                cgcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTATGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggc                                                                     <  2:1619442‑M1/99‑33 (MQ=255)
                                cgcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGcc                                                                    <  1:693330/100‑1 (MQ=255)
                                   gATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggcaatc                                                                 <  1:1221082‑M1/100‑37 (MQ=255)
                                     tctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGTGCCTACGt                                                               >  2:3102713/1‑100 (MQ=255)
                                      ctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGtt                                                              >  1:328275/1‑100 (MQ=255)
                                      ctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGtt                                                              >  1:1149635/1‑100 (MQ=255)
                                      ctcACCGAACACCAGCGAGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggcaatctac                                                              <  1:2329126‑M1/100‑40 (MQ=255)
                                       tcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggcaatctaca                                                             <  1:1968342‑M1/100‑41 (MQ=255)
                                        cACCGAACACCAGCGCGGCGAACACTCCTACTAGTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                            >  2:2732987/1‑100 (MQ=255)
                                        cACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                            <  1:3732258/100‑1 (MQ=255)
                                        cACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                            <  1:1097351/100‑1 (MQ=255)
                                          ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          >  1:4002518/1‑100 (MQ=255)
                                          ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          >  2:3556113/1‑100 (MQ=255)
                                               cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                     >  2:1656369/1‑100 (MQ=255)
                                               cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                     <  1:1034344/100‑1 (MQ=255)
                                                acCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGc                                                    >  1:1695869/1‑100 (MQ=255)
                                                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   <  1:623710/100‑1 (MQ=255)
                                                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   >  2:2303456/1‑100 (MQ=255)
                                                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   >  2:1894741/1‑100 (MQ=255)
                                                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   >  2:3249222/1‑100 (MQ=255)
                                                  cAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCa                                                  <  1:3808619/100‑1 (MQ=255)
                                                   aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                 <  1:2424621/100‑1 (MQ=255)
                                                    gcgcGGCTAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCTATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGa                                                <  2:2401441/100‑1 (MQ=255)
                                                     cgcgGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGAc                                               >  1:2991880/1‑100 (MQ=255)
                                                      gcggcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACg                                              >  2:4083392/1‑100 (MQ=255)
                                                      gcggcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACg                                              <  2:691203/100‑1 (MQ=255)
                                                         gcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTg                                           >  2:3724555/1‑100 (MQ=255)
                                                                   ctactactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAtt                                 >  1:3051779/1‑100 (MQ=255)
                                                                    tactactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTg                                >  1:2588167/1‑100 (MQ=255)
                                                                    tactactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTg                                >  1:3498975/1‑100 (MQ=255)
                                                                     actactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGc                               <  2:2862654/100‑1 (MQ=255)
                                                                      ctactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCt                              <  1:2664010/100‑1 (MQ=255)
                                                                      ctactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCt                              >  1:2010687/1‑100 (MQ=255)
                                                                       tactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCtt                             <  1:1849204/100‑1 (MQ=255)
                                                                       tactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCtt                             >  2:2381954/1‑100 (MQ=255)
                                                                        actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  2:138654/1‑100 (MQ=255)
                                                                        actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  1:3783235/1‑100 (MQ=255)
                                                                        actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  1:1063309/1‑100 (MQ=255)
                                                                         ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTg                           >  1:810464/1‑100 (MQ=255)
                                                                         ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTg                           >  2:4053284/1‑100 (MQ=255)
                                                                                 tCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATcc                   <  2:3502197/100‑1 (MQ=255)
                                                                                  ccccTCTTTTGTAGATTGCCCGATGCGACGCTAAGGCGTGATTTCGGGCCTACGTTGAACATGTGGGAGACGTTGGCGCAGCCTTGCTTTGTCAAAt                     <  2:2169443/97‑1 (MQ=255)
                                                                                   cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                 >  2:11580/1‑100 (MQ=255)
                                                                                    ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                <  1:282106/100‑1 (MQ=255)
                                                                                    ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                >  2:3356549/1‑100 (MQ=255)
                                                                                     ctctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCgg               <  2:1695857/100‑1 (MQ=255)
                                                                                     ctctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCgg               >  1:2501912/1‑100 (MQ=255)
                                                                                       ctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGtt             >  1:725542/1‑100 (MQ=255)
                                                                                        ttttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTc            <  1:3142974/100‑1 (MQ=255)
                                                                                        ttttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTc            <  1:2706448/100‑1 (MQ=255)
                                                                                         tttGTAGATTGCCCGATGCGGCGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCg           <  2:935072/100‑1 (MQ=255)
                                                                                         tttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCg           <  2:1571909/100‑1 (MQ=255)
                                                                                          ttGTAGGTTGCCCGATGCAACGCTAAAACAGCATTTCGCGCCTACGTTGAACATGTGCCAGACGTTGGCGCACCATTGCTTTGTCAAATCCTCGGt              <  2:2793677/96‑1 (MQ=255)
                                                                                          ttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagtagtaggagtgttcgccgcgctggtgttcggtg          <  1:1468870‑M2/100‑60 (MQ=255)
                                                                                           tGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGtt         <  2:3592888/100‑1 (MQ=255)
                                                                                           tGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGtt         <  1:993291/100‑1 (MQ=255)
                                                                                            gTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagtagtaggagtgttcgccgcgctggtgttcggtgag        <  1:2184676‑M2/100‑62 (MQ=255)
                                                                                              aGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTAGGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGCTTcc      <  2:1274892/100‑1 (MQ=255)
                                                                                              aGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTcc      >  2:1861382/1‑100 (MQ=255)
                                                                                               gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagtagtaggagtgttcgccgcgctggtgttcggtgagatc     <  1:2755148‑M2/100‑65 (MQ=255)
                                                                                               gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc     >  1:3960276/1‑100 (MQ=255)
                                                                                               gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGGTTccc     <  2:808339/100‑1 (MQ=255)
                                                                                                 ttGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcg   <  1:151854/100‑1 (MQ=255)
                                                                                                  tGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagtagtaggagtgttcgccgcgctggtgttcggtgagatcgcg  <  1:825270‑M2/100‑68 (MQ=255)
                                                                                                  |                                                                                                   
TGCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGC  >  NC_000913/3546123‑3546320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.