New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3621939 | NA (NA) | 10 (0.070) | 6/170 | NT | 100% | coding (2748/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | = 3621967 | 0 (0.000) | coding (2776/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
GCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACC > NC_000913/3621865‑3622038 | gCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGC > 1:586909‑M2/1‑100 (MQ=255) cAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCC < 1:160078‑M2/100‑1 (MQ=255) cAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCC < 1:3791866‑M2/100‑1 (MQ=255) aGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCG > 2:3949769‑M2/1‑100 (MQ=255) aGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCG > 2:2043884‑M2/1‑100 (MQ=255) aGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCG > 1:863364‑M2/1‑100 (MQ=255) aGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCG < 1:638637‑M2/100‑1 (MQ=255) aGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCG > 1:55055‑M2/1‑100 (MQ=255) aGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCG > 1:3259358‑M2/1‑100 (MQ=255) aGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCG > 1:26225‑M2/1‑100 (MQ=255) gCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACAGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGG < 1:3943016‑M2/100‑1 (MQ=255) gCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggtatccgggatgcggatatcc < 1:4070504‑M2/99‑65 (MQ=255) cTGCACCCGGACAGCACCCTCAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccag < 1:3525871‑M2/100‑67 (MQ=255) tGCACCCGGACAGCACCCTAAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccaga < 1:996350‑M2/100‑68 (MQ=255) gCACCCGGACAGCACCCTCGGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccggat < 1:143081‑M2/100‑69 (MQ=255) cACCCGGACAGCACCCTCAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggctatccagatt < 1:3840826‑M2/100‑70 (MQ=255) cACCCGGACAGCACCCTCAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagatt < 1:3972807‑M2/100‑70 (MQ=255) aCGCGGACAGCGCCCTCAGCATGTGGCCGGgtgcagcgccgagtcgggcaggcggttacctgccgggtctgtggtatacgggatgcggatatccagattc < 2:2250931‑M2/100‑71 (MQ=255) aCCCGGACAGCACCCTCAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagattc < 1:187448‑M2/100‑71 (MQ=255) cccGGACAGCACCCTCAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagattcg < 2:3045576‑M2/100‑72 (MQ=255) cccGGACAGCACCCTCAGCATGTGGCCGGgtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagattcg < 2:3621841‑M2/100‑72 (MQ=255) | GCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACC > NC_000913/3621865‑3622038 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |