New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4063563NA (NA)16 (0.120) 7/164 NT NA noncoding (45/75 nt) REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4063593 NA (NA)noncoding (75/75 nt) REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 220 total aligned reads displayed.

AGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGAC  >  NC_000913/4063466‑4063662
                                                                                                 |                                                                                                   
aGCGTATTAGCCAACGTAAGAAAGAGATGCTAGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgc                                                                                                   >  2:2977291‑M1/1‑98 (MQ=255)
 gCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgcc                                                                                                  >  2:1911524‑M1/1‑97 (MQ=255)
  cGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTTAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccg                                                                                                 <  1:1183705‑M1/100‑5 (MQ=255)
   gTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGATTAATTAATGGCCGGATGTGGTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgcc                                                                                                  >  2:944903‑M1/1‑95 (MQ=255)
    tATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccg                                                                                                 >  2:3378349‑M1/1‑94 (MQ=255)
      ttAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATa                                                                                             <  2:637384/100‑1 (MQ=255)
      ttAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATa                                                                                             <  2:1123623/100‑1 (MQ=255)
        aGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAg                                                                                           <  1:496503/100‑1 (MQ=255)
        aGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAg                                                                                           <  1:2316081/100‑1 (MQ=255)
           cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTATTGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        >  2:733964/1‑100 (MQ=255)
           cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        >  1:385367/1‑100 (MQ=255)
           cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        <  1:3365955/100‑1 (MQ=255)
           cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        >  1:3252708/1‑100 (MQ=255)
           cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        <  2:2134704/100‑1 (MQ=255)
           cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        >  2:779600/1‑100 (MQ=255)
           cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        >  1:2097073/1‑100 (MQ=255)
            aaCGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGt                                                                                       <  2:3037720/100‑1 (MQ=255)
               gTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTa                                                                                    <  2:1281486/100‑1 (MQ=255)
               gTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTa                                                                                    >  1:896937/1‑100 (MQ=255)
                tAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAc                                                                                   <  2:1189449/100‑1 (MQ=255)
                  agaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgc                                                                                 >  2:3599610/1‑100 (MQ=255)
                  agaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgc                                                                                 >  2:3478791/1‑100 (MQ=255)
                  agaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgc                                                                                 >  1:3002061/1‑100 (MQ=255)
                  agaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgc                                                                                 <  2:555633/100‑1 (MQ=255)
                  agaaagaGATGCTGGCGGCTGAAGCTGAATTAATGGCCGGATGTGCTTAATCCGTCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGTCGTTTAcgc                                                                                 >  1:1219270/1‑100 (MQ=255)
                   gaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgcc                                                                                <  1:469312/100‑1 (MQ=255)
                   gaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGATTAATCCGGCCAACGAAAAAGGTAGCAACAGTAGGCCGGGTAAAGCGTTTAagcc                                                                                >  2:2662228/1‑100 (MQ=255)
                   gaaagaGATGCTGGCGGCGGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgcc                                                                                <  1:1674852/100‑1 (MQ=255)
                    aaagaGATGCTGGCGGCTGAAGCTTAATTAATTGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgccg                                                                               <  2:2763591/100‑1 (MQ=255)
                       gggatgCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCA                                                                             >  2:2417834‑M2/3‑99 (MQ=255)
                       gagaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCAT                                                                            <  2:3016781‑M2/100‑1 (MQ=255)
                        agaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatc                                                                           <  2:3961864‑M1/100‑27 (MQ=255)
                        agaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatc                                                                           <  1:1469875‑M1/100‑27 (MQ=255)
                         gaTGCTGGCGGCTGAAGCTTAATTAATGTCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgcctgatgcggcgtaaacgccttatcc                                                                          <  2:4066464‑M1/100‑28 (MQ=255)
                         gaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  1:996294‑M1/100‑28 (MQ=255)
                         gaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCC                                                                          <  1:3875010‑M2/100‑1 (MQ=255)
                         gaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCC                                                                          <  1:2287311‑M2/100‑1 (MQ=255)
                          aTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccg                                                                         <  1:65495‑M1/100‑29 (MQ=255)
                           tGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCGACCGTAGgccggatgcggcgtaaacgccttatccgg                                                                        <  1:2915737‑M1/100‑30 (MQ=255)
                            gCTGGCGGCTTAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCTTACgccggatgcggcgtaaacgccttatccggc                                                                       <  2:2721140‑M1/100‑31 (MQ=255)
                            gCTGGCGGCTGAAGCTTAATTAATGGTCGGATGTGCTTACTCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                       >  2:1427868‑M2/1‑100 (MQ=255)
                            gCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                       >  2:215824‑M2/1‑100 (MQ=255)
                             cTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccggcc                                                                      <  2:573279‑M1/100‑32 (MQ=255)
                              tGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAg                                                                     <  1:4420/100‑1 (MQ=255)
                               ggcggcTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAg                                                                     >  2:3537609/1‑99 (MQ=255)
                               ggcggcTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGt                                                                    >  1:894549/1‑100 (MQ=255)
                               ggcggcTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGt                                                                    <  2:3591510/100‑1 (MQ=255)
                                gcggcTGAAGCTTGATTAATGGCGGGATGTGCTTAATGCGGCCAACGAAAACGGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGtt                                                                   <  2:1910340/100‑1 (MQ=37)
                                gcggcTGAAGCTTAATTAATGGCCGGATGTGCGTAAGCCGGCCAACGTAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                      <  2:3847747/97‑1 (MQ=255)
                                 cggcTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGttt                                                                  >  1:1089847/1‑100 (MQ=255)
                                   gcTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTca                                                                <  1:1436619/100‑1 (MQ=255)
                                    cTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTcan                                                               <  2:2330187/100‑2 (MQ=255)
                                    cTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTcac                                                               <  1:410688/100‑1 (MQ=255)
                                       aaGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATc                                                            <  1:3111651/100‑1 (MQ=255)
                                        aGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCa                                                           <  1:1539773/100‑1 (MQ=255)
                                         gCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCag                                                          >  1:3662960/1‑100 (MQ=255)
                                             aattaatGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCagaaga                                                      <  2:1707200/100‑1 (MQ=255)
                                              attaatGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAgaagaa                                                     >  1:1852749/1‑100 (MQ=255)
                                              attaatGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAgaagaa                                                     <  1:612017/100‑1 (MQ=255)
                                                taatGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAAt                                                   <  1:2057741/100‑1 (MQ=255)
                                                 aatGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccggcctacggttgatacggttttcg                                                  <  1:1132351‑M1/100‑52 (MQ=255)
                                                  atGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATAc                                                 >  2:790973/1‑100 (MQ=255)
                                                   tGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACt                                                >  1:259819/1‑100 (MQ=255)
                                                    ggCCGGATGTGCTTAATCCGGCCAACGAAAACCGTCTCAACCGTAGGCCGGATAAGGCGTCTACGCCGCATCCGGCAGTTTCCCATCAGCAGAAATa                                                  >  2:2605368/1‑97 (MQ=37)
                                                    ggCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACtt                                               >  2:368663/1‑100 (MQ=255)
                                                      cctgATTTGCTTAATCCGGCCAACGAAACCCTTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCg                                             <  1:3446714/97‑1 (MQ=37)
                                                      ccGTATGTGCTTAATCCGTCCAACGAAAACCGTATCAACCGTAGGCCAGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACt                                                <  2:2324824/97‑1 (MQ=255)
                                                          aTGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTccc                                         <  2:420759/100‑1 (MQ=255)
                                                          aTGCGCCTAATCCGGCAAACGAAAACCGTATCAACCGTAGGCCGCATAAGGCGTTTACGCCGAATCAGGCAGTTTCACACCCGAAGAAATACTTCGt                                            <  2:3633334/97‑1 (MQ=25)
                                                                ttAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACg                                   >  1:2181675/1‑100 (MQ=255)
                                                                ttAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACg                                   <  1:861294/100‑1 (MQ=255)
                                                                 tAATCCGGCCAAAGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATGCGGCAGTTTCACATCTTAATAAAGACGTCGTCCCTATACg                                   <  2:1445521/99‑1 (MQ=25)
                                                                    tCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATc                               >  2:1313488/1‑100 (MQ=255)
                                                                     ccGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCt                              >  1:1146755/1‑100 (MQ=255)
                                                                      cGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTg                             >  1:2158069/1‑100 (MQ=255)
                                                                      cGGCCAACGAAAACCGTATCAACCGTAGGCCAGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTg                             >  1:2615257/1‑100 (MQ=255)
                                                                        gCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGt                           <  1:733970/100‑1 (MQ=255)
                                                                        gCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGt                           >  2:1020547/1‑100 (MQ=255)
                                                                         ccAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGtt                          >  2:3160601/1‑100 (MQ=255)
                                                                         ccAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGtt                          >  1:3682053/1‑100 (MQ=255)
                                                                          cAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGt                           <  2:3201707/98‑1 (MQ=255)
                                                                           aaCGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGtttt                        <  2:3107920/100‑1 (MQ=255)
                                                                            aCGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGtttt                        <  2:573506/99‑1 (MQ=255)
                                                                             cGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGtttt                        >  2:1777799/1‑98 (MQ=255)
                                                                               aaaaCCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTc                    <  1:4055065/100‑1 (MQ=255)
                                                                                 aaCCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTcgc                  >  1:3200493/1‑100 (MQ=255)
                                                                                 aaCCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTcgc                  >  1:1973948/1‑100 (MQ=255)
                                                                                   ccGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCgg                >  2:1547492/1‑100 (MQ=255)
                                                                                    cGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCggn               <  1:2949826/100‑2 (MQ=255)
                                                                                      tATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCggtgg             <  1:8081/100‑1 (MQ=255)
                                                                                       aTCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCggtggt            >  1:2751315/1‑100 (MQ=255)
                                                                                       aTCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCggtggt            <  1:550871/100‑1 (MQ=255)
                                                                                          aaCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACg         >  1:127495/1‑100 (MQ=255)
                                                                                           aCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACgg        <  1:2523090/100‑1 (MQ=255)
                                                                                             cGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGtt      >  1:2848012/1‑100 (MQ=255)
                                                                                               tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCg    >  1:2010945/1‑100 (MQ=255)
                                                                                                aGGCCGAATAAGGCGTTTACGCCGCGTCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGa   <  2:226476/100‑1 (MQ=255)
                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGAc  >  1:2413835/1‑100 (MQ=255)
                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGAc  >  1:2567081/1‑100 (MQ=255)
                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGAc  >  1:1331897/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
AGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGAC  >  NC_000913/4063466‑4063662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.