New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4629407173 (1.170)5 (0.040) 4/164 NT 2.9% coding (1116/1668 nt) ettA energy‑dependent translational throttle A
?NC_000913 = 4629423 177 (1.300)coding (1100/1668 nt) ettA energy‑dependent translational throttle A
Rejected: Frequency below cutoff threshold.

Only 100 of 223 total aligned reads displayed.

CCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCA  >  NC_000913/4629308‑4629506
                                                                                                   |                                                                                                   
 cAAACGGTTTTGCTGTTATCCATTGAGTCACGGCACTGATCAACCTACGCCAGTTTCACCGTTTCACCCAAAGTGATCGTGCCGCTGTCCGGCTGTTCCt                                                                                                    >  2:2568758/1‑100 (MQ=255)
 cAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCt                                                                                                    <  1:661388/100‑1 (MQ=255)
 cAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCt                                                                                                    >  1:3806004/1‑100 (MQ=255)
  aaaCGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTg                                                                                                   <  2:3250937/100‑1 (MQ=255)
   aaCGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCt                                                                                                    <  2:3309829/98‑1 (MQ=255)
     cGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGAc                                                                                                 <  2:3984619/99‑1 (MQ=255)
       gTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCag                                                                                              <  2:2994007/100‑1 (MQ=255)
       gTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAACTGTTGGTGCCGCTGTCCGGCTGTTCCTGACCag                                                                                              <  2:2714184/100‑1 (MQ=255)
         tttGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCagag                                                                                            <  1:1471015/100‑1 (MQ=255)
         tttGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCagag                                                                                            <  1:681969/100‑1 (MQ=255)
         tttGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCag                                                                                              >  1:3825879/1‑98 (MQ=255)
           tGCTGTCATCCATTGAATCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCagag                                                                                            >  2:504304/1‑98 (MQ=255)
              tGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCAt                                                                                       >  2:3725235/1‑100 (MQ=255)
              tGTTATCCATTGAGTCACGGAACTGATAAACCGACGACAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCCGAGATCa                                                                                        >  1:2239601/1‑99 (MQ=255)
               gTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGGCCGGCAGTCCCTGACCAGAGATCAt                                                                                       <  2:2238680/99‑1 (MQ=255)
                ttATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATAc                                                                                     <  2:183090/100‑1 (MQ=255)
                    ccATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACgga                                                                                  <  2:3166588‑M2/99‑4 (MQ=255)
                     cATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACggaac                                                                                >  2:1806877‑M2/1‑95 (MQ=255)
                     cATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACgga                                                                                  <  1:1914561‑M2/98‑4 (MQ=255)
                       ttGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACggaacag                                                                              >  1:2709872‑M2/1‑93 (MQ=255)
                        tGAGTCACGGAACTGATCAACCGGCGCCCGTGTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCGTGAACAGAGATCATACggaacag                                                                              >  2:3758968‑M2/1‑92 (MQ=255)
                        tGAGTCACGGAACTGAACAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAgg                                                                             <  2:3689639/100‑1 (MQ=255)
                         gAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCgtatgatctctggtcaggaacagcc                                                                            <  2:1679369‑M1/100‑26 (MQ=255)
                         gAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCgtatgatctctggtcaggaacagcc                                                                            <  1:252497‑M1/100‑26 (MQ=255)
                           gTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATCCGCAACAGGGTc                                                                          >  2:3739168/1‑100 (MQ=255)
                           gTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTc                                                                          >  1:195511/1‑100 (MQ=255)
                           gTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTc                                                                          >  2:40404/1‑100 (MQ=255)
                            tCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCgtatgatctctggtcaggaacagccgga                                                                         <  1:1084378‑M1/100‑29 (MQ=255)
                             cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGa                                                                        >  1:4133380/1‑100 (MQ=255)
                             cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTAGa                                                                        >  1:962937/1‑100 (MQ=255)
                              aCGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGAt                                                                       >  1:873151/1‑100 (MQ=255)
                               cGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGAtt                                                                      <  2:2001339/100‑1 (MQ=255)
                               cGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGAtt                                                                      <  2:3537437/100‑1 (MQ=255)
                                 gAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTa                                                                    >  2:1054154/1‑100 (MQ=255)
                                    cTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAccc                                                                 <  1:3720569/100‑1 (MQ=255)
                                    cTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAccc                                                                 <  1:3752398/100‑1 (MQ=255)
                                    cTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATCGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAccc                                                                 <  2:657870/100‑1 (MQ=255)
                                     tGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCg                                                                >  1:1409373/1‑100 (MQ=255)
                                      gATCAGCCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGc                                                               <  2:2326545/100‑1 (MQ=255)
                                      gATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGc                                                               >  1:3131838/1‑100 (MQ=255)
                                      gATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGc                                                               >  2:454698/1‑100 (MQ=255)
                                      caTCAACCGACGCCAGTTTCAACGTTTCACCCAAAGTCATGGTGCCGCAGTCCGGCTGTTCCTGACCAGCGATCATCCGGAACACGGTCGATTTATCCGc                                                               >  2:1725146/2‑100 (MQ=255)
                                       aTCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCa                                                              <  1:1833325/100‑1 (MQ=255)
                                        tCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCAc                                                             <  2:2651361/100‑1 (MQ=255)
                                         cAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCAcc                                                            <  1:2533867/100‑1 (MQ=255)
                                         cAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCAcc                                                            >  2:2103202/1‑100 (MQ=255)
                                           aCCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGTAACAGGGTCGATTTACCCGCAcc                                                            >  1:3828568/1‑98 (MQ=255)
                                             cGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTc                                                        <  1:1331837/100‑1 (MQ=255)
                                             cGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTc                                                        >  1:1973064/1‑100 (MQ=255)
                                              gACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGATCGATTTACCCGCACCGTTCg                                                       <  1:1259063/100‑1 (MQ=255)
                                               aCGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCgg                                                      <  1:495170/100‑1 (MQ=255)
                                                cGCCGGTATCACCTTTTCACCCAACGTGATGGTGCCGCTGTCCGGCTGGTCCTGCCTATAGATCCTACGGAACATTGTCGATTTACCCGCACCGtcc                                                        <  2:3428424/97‑3 (MQ=255)
                                                cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCgtatgatctctggtcaggaacagccggacagcggcaccatcactttgg                                                     <  1:1116872‑M1/100‑49 (MQ=255)
                                                cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGa                                                     >  1:2146122/1‑100 (MQ=255)
                                                cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGa                                                     >  2:1605097/1‑100 (MQ=255)
                                                 gCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAc                                                    <  2:1396735/100‑1 (MQ=255)
                                                  ccAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAcc                                                   >  2:3821266/1‑100 (MQ=255)
                                                   cAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCg                                                  >  1:2462004/1‑100 (MQ=255)
                                                     gattcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCgat                                                >  1:2804469/3‑100 (MQ=255)
                                                      tttcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCgatg                                               <  1:3655306/100‑1 (MQ=255)
                                                       ttcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCgatga                                              >  1:151489/1‑100 (MQ=255)
                                                        tcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTCACCAGAGATCATACGGAACAGCGTCGATTTACCCGCACCGTTCGGACCcat                                                >  2:1441204/1‑97 (MQ=255)
                                                         caccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATc                                            >  1:1793305/1‑100 (MQ=255)
                                                         caccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCCGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCgatgat                                             <  2:3617593/99‑1 (MQ=255)
                                                          accgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATcc                                           <  2:694650/100‑1 (MQ=255)
                                                           ccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATccc                                          >  2:289656/1‑100 (MQ=255)
                                                            cgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcg                                         >  1:117272/1‑100 (MQ=255)
                                                             gtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcga                                        <  1:3632106/100‑1 (MQ=255)
                                                             gtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcga                                        <  1:472774/100‑1 (MQ=255)
                                                                 caccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGAt                                    >  1:3859960/1‑100 (MQ=255)
                                                                   cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                                  >  2:2447422/1‑100 (MQ=255)
                                                                     cAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCt                                <  2:958973/100‑1 (MQ=255)
                                                                       aaGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTcc                              <  1:1601564/100‑1 (MQ=255)
                                                                       aaGTGATGGTGCAGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTcc                              >  1:915789/1‑100 (MQ=255)
                                                                         gTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCt                             >  2:2738250/1‑99 (MQ=255)
                                                                          tGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCtt                            >  2:3915332/1‑99 (MQ=255)
                                                                             tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCgg                        >  2:3148828/1‑100 (MQ=255)
                                                                               gTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCggg                       >  2:3445568/1‑99 (MQ=255)
                                                                                 gcggCTGTCCGGCTGTTCCTGACCACCGATCAGACGGGACAGGGTCGATTTACTCGCCCCGTTCGGACCGTTTATCCCGACGATCGCTCCGTTAgggggc                    <  2:1693445/97‑4 (MQ=255)
                                                                                 gCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATc                    <  1:3148847/100‑1 (MQ=255)
                                                                                 gCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATc                    <  1:2620131/100‑1 (MQ=255)
                                                                                 gCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGAACCGTTCGGACCGATGATACCGACGATCGCTCCTTTCGGGATc                    >  1:717662/1‑100 (MQ=255)
                                                                                  ccGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCg                   >  1:2962967/1‑100 (MQ=255)
                                                                                  ccGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCg                   >  2:2383987/1‑100 (MQ=255)
                                                                                    gCTGTCCGGCTGTTCCTGACCAGAGATCATACggaacagccggacagcggcaccatcactttgggtgaaacggtgaaactggcgtcggttgatcagttcc                 >  2:1116865‑M2/1‑32 (MQ=255)
                                                                                    gCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCgag                 >  1:689061/1‑100 (MQ=255)
                                                                                     cTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCgaga                <  1:3949471/100‑1 (MQ=255)
                                                                                      tGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGaa               <  1:2323025/100‑1 (MQ=255)
                                                                                         ccGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAg              >  2:3591149/1‑98 (MQ=255)
                                                                                          cGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATAGCTCCTTTCGGGATCGAGAAGCTc           >  2:2815487/1‑100 (MQ=255)
                                                                                               gTTCCgtatgatctctggtcaggaacagccggacagcggcaccatcactttgggtgaaacggtgaaactggcgtcggttgatcagttccgtgactcaatg      <  2:3650973‑M1/100‑96 (MQ=255)
                                                                                               gTTCCgtatgatctctggtcaggaacagccggacagcggcaccatcactttgggtgaaacggtgaaactggcgtcggttgatcagttccgtgactcaatg      <  1:2938624‑M1/100‑96 (MQ=255)
                                                                                               gTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtc      >  1:3253535/1‑100 (MQ=255)
                                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc   <  1:3572182/100‑1 (MQ=255)
                                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc   <  1:40404/100‑1 (MQ=255)
                                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc   <  1:2492085/100‑1 (MQ=255)
                                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc   >  2:1537187/1‑100 (MQ=255)
                                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc   >  2:2844218/1‑100 (MQ=255)
                                                                                                   cTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatca  >  1:2706060/1‑100 (MQ=255)
                                                                                                   cTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatca  >  1:601248/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCA  >  NC_000913/4629308‑4629506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.