BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4629407	173 (1.170)	5 (0.040)	4/164	NT	2.9%	coding (1116/1668 nt)	ettA	energy‑dependent translational throttle A
*	?	NC_000913	= 4629423	177 (1.300)	5 (0.040)	4/164	NT	2.9%	coding (1100/1668 nt)	ettA	energy‑dependent translational throttle A
Rejected: Frequency below cutoff threshold.

Only 100 of 215 total aligned reads displayed.

TTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGC  >  NC_000913/4629324‑4629522

ttATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATAc                                                                                                     <  1:3828328/100‑1 (MQ=255)

     cATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACgga                                                                                                  <  1:1914561‑M2/98‑4 (MQ=255)

        tGAGTCACGGAACTGATCAACCGGCGCCCGTGTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCGTGAACAGAGATCATACggaacag                                                                                              >  2:3758968‑M2/1‑92 (MQ=255)

        tGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAgg                                                                                             >  1:4030949/1‑100 (MQ=255)

           gTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATCCGCAACAGGGTc                                                                                          >  2:3739168/1‑100 (MQ=255)

           gTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTc                                                                                          >  1:195511/1‑100 (MQ=255)

             cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGCACAGGGt                                                                                           >  2:3182898/1‑97 (MQ=255)

             cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGa                                                                                        >  1:4133380/1‑100 (MQ=255)

             cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTAGa                                                                                        >  1:962937/1‑100 (MQ=255)

              aCGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGAt                                                                                       >  1:873151/1‑100 (MQ=255)

               cGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGAtt                                                                                      >  1:2651377/1‑100 (MQ=255)

                ggAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCCGCTGTTCCTGACCAGAGATCATACGGGACAGGGTCGAttt                                                                                     >  2:3167107/1‑100 (MQ=255)

                 gAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTa                                                                                    >  2:1546432/1‑100 (MQ=255)

                 gAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCCGACCAGAGATCATACGGAACAGGGTCGATTTa                                                                                    <  2:61942/100‑1 (MQ=255)

                   aCTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAcc                                                                                  >  1:277983/1‑100 (MQ=255)

                    cTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAccc                                                                                 >  2:2841125/1‑100 (MQ=255)

                      gATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTGGATTTACCCGc                                                                               >  1:482959/1‑100 (MQ=255)

                        tCAACCGCCGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGGCCGGCTGTTCCTGACCAGAGATCATATGGAACAGGGTCGATTTACCCg                                                                                <  2:2725379/97‑1 (MQ=255)

                        tCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCAc                                                                             <  2:2651361/100‑1 (MQ=255)

                         cAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCAcc                                                                            >  2:2103202/1‑100 (MQ=255)

                             cGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTc                                                                        >  2:3676489/1‑100 (MQ=255)

                             cGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTc                                                                        <  1:1331837/100‑1 (MQ=255)

                              gACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCg                                                                       >  2:1988012/1‑100 (MQ=255)

                              gACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGATCGATTTACCCGCACCGTTCg                                                                       <  1:1259063/100‑1 (MQ=255)

                                cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGa                                                                     >  2:2285552/1‑100 (MQ=255)

                                cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGa                                                                     >  2:1605097/1‑100 (MQ=255)

                                cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGa                                                                     >  1:2146122/1‑100 (MQ=255)

                                 gCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAc                                                                    <  2:1396735/100‑1 (MQ=255)

                                 caccgtttcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCCGAGATTATACGGAACAGGGTCGGTTTACCCGCACCATTAgg                                                                      >  1:173294/5‑98 (MQ=255)

                                  ccAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAcc                                                                   <  2:2373820/100‑1 (MQ=255)

                                  ccAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAcc                                                                   >  2:3821266/1‑100 (MQ=255)

                                  ccAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAcc                                                                   <  1:3732158/100‑1 (MQ=255)

                                   cAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCg                                                                  >  1:2383025/1‑100 (MQ=255)

                                      tttcaccgtttcaccCAAAGTGATGGTGCCGTTGTCCTGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGAGTTACCCGCACCGTTc                                                                        <  2:3428434/91‑1 (MQ=255)

                                      tttcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCgatg                                                               <  1:2926669/100‑1 (MQ=255)

                                       ttcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCgatga                                                              >  1:151489/1‑100 (MQ=255)

                                         caccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATc                                                            >  1:1793305/1‑100 (MQ=255)

                                         caccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATc                                                            >  1:678793/1‑100 (MQ=255)

                                           ccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATccc                                                          >  2:369619/1‑100 (MQ=255)

                                           ccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATccc                                                          >  2:67892/1‑100 (MQ=255)

                                           ccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATccc                                                          >  2:289656/1‑100 (MQ=255)

                                            cgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcg                                                         <  1:3650997/100‑1 (MQ=255)

                                            cgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcg                                                         >  1:117272/1‑100 (MQ=255)

                                             gggtcaccGTAAGTGCTGGTTCCGCTGCCCGGCGGTTCGCCCCAAGAGATTATACGGATCTTGGTCGCTTTACCCTCACCGTGCGGACCGATGATcc                                                           <  2:822780/94‑1 (MQ=255)

                                               ttcaccCAGAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcgac                                                       <  2:1745740/99‑1 (MQ=255)

                                               ttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcgacg                                                      >  2:3613969/1‑100 (MQ=255)

                                                 caccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGAt                                                    >  2:3399360/1‑100 (MQ=255)

                                                 caccCAAAGTGATGGTGCCGCTGCCCGGCTGTCCCTGGCCAGAGCTCATACAGAACAGGGTCGATTTACCCGCACCGTTAGGACCGATGATCCCGACGAt                                                    <  2:2232095/100‑1 (MQ=255)

                                                 cacacaAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGAt                                                    >  1:3839445/1‑100 (MQ=255)

                                                  accCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATc                                                   <  1:3083901/100‑1 (MQ=255)

                                                  accCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATc                                                   >  2:3515457/1‑100 (MQ=255)

                                                   cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                                                  >  2:4131668/1‑100 (MQ=255)

                                                   cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                                                  >  2:2447422/1‑100 (MQ=255)

                                                   cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                                                  >  1:391559/1‑100 (MQ=255)

                                                   cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                                                  <  1:3676513/100‑1 (MQ=255)

                                                    ccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGc                                                 <  1:549427/100‑1 (MQ=255)

                                                     cAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCt                                                <  2:958973/100‑1 (MQ=255)

                                                       aaGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTcc                                              <  1:1601564/100‑1 (MQ=255)

                                                       aaGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTcc                                              <  1:247013/100‑1 (MQ=255)

                                                         gTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCtt                                            <  1:1436145/100‑1 (MQ=255)

                                                         gTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCtt                                            >  2:2052454/1‑100 (MQ=255)

                                                         gTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCt                                             >  2:2738250/1‑99 (MQ=255)

                                                          tGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCtt                                            >  2:3915332/1‑99 (MQ=255)

                                                             tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCgg                                        >  2:3148828/1‑100 (MQ=255)

                                                             tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCgg                                        <  1:3779908/100‑1 (MQ=255)

                                                             tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCACTCCTTTCgg                                        <  2:182177/100‑1 (MQ=255)

                                                              ggTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCggg                                       <  2:4004118/100‑1 (MQ=255)

                                                              ggTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCggg                                       <  1:3619798/100‑1 (MQ=255)

                                                                tGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGAt                                     <  2:1696291/100‑1 (MQ=255)

                                                                 gCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATc                                    <  1:3148847/100‑1 (MQ=255)

                                                                 gCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGAACCGTTCGGACCGATGATACCGACGATCGCTCCTTTCGGGATc                                    >  1:717662/1‑100 (MQ=255)

                                                                  ccGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCg                                   <  1:2612180/100‑1 (MQ=255)

                                                                  ccGCTAACCGGCTGTTCCTGACCAGAGACCATACGGAACAGGGTCCATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGTAtn                                    <  1:1989887/99‑2 (MQ=255)

                                                                   cGCTGTCCGGCTGTTCCTGACCAGAGATCCTACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGAGCCCGACGATCGCTCCTTTCGGGATCg                                   <  2:3621714/99‑1 (MQ=255)

                                                                    gCTGTCCGGCTGTTCCTGACCAGAGATCATACggaacagccggacagcggcaccatcactttgggtgaaacggtgaaactggcgtcggttgatcagttcc                                 >  2:1116865‑M2/1‑32 (MQ=255)

                                                                    gCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCgag                                 <  2:3859935/100‑1 (MQ=255)

                                                                    gCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCgag                                 >  1:689061/1‑100 (MQ=255)

                                                                      tGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGaa                               <  1:2516116/100‑1 (MQ=255)

                                                                        tCCGGCTGTTCCTGACCAGAGATCATACggaacagccggacagcggcaccatcactttgggtgaaacggtgaaactggcgtcggttgatcagttccgtga                             <  1:1084378‑M2/100‑73 (MQ=255)

                                                                         ccGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCt                            >  1:1401679/1‑100 (MQ=255)

                                                                         ccGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTACTTTCGGGATCAAGGAg                              >  2:463354/1‑98 (MQ=255)

                                                                          cGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATAGCTCCTTTCGGGATCGAGAAGCTc                           >  2:2815487/1‑100 (MQ=255)

                                                                           ggCTGTTCCTGACCAGAGATCATACggaacagccggacagcggcaccatcactttgggtgaaacggtgaaactggcgtcggttgatcagttccgtgactc                          <  2:1679369‑M2/100‑76 (MQ=255)

                                                                               gTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtc                      >  1:3253535/1‑100 (MQ=255)

                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc                   <  1:2255474/100‑1 (MQ=255)

                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc                   >  2:1537187/1‑100 (MQ=255)

                                                                                  ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc                   <  1:3572182/100‑1 (MQ=255)

                                                                                   cTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatca                  >  1:601248/1‑100 (MQ=255)

                                                                                   cTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatca                  >  1:2706060/1‑100 (MQ=255)

                                                                                     gACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCCCTCCTTTCGGGATCGAGAAGCTCAGGTCatcaa                 <  2:3564274/99‑1 (MQ=255)

                                                                                      aCCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCatcaatc               <  1:2685933/100‑1 (MQ=255)

                                                                                          gagaTCATACGGACCAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcagca           <  2:1048680/100‑1 (MQ=255)

                                                                                              tCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACg       <  1:454702/100‑1 (MQ=255)

                                                                                                 tACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGCTCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc    >  2:1067148/1‑100 (MQ=255)

                                                                                                 tACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc    >  1:2486489/1‑100 (MQ=255)

                                                                                                 tACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc    >  2:2957343/1‑100 (MQ=255)

                                                                                                  aCGGAACAGGGTCGATTTACCCGCACCGTTCGGAGCGATGATCCCGACCATCGCTCCTCTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCg   <  2:2619053/100‑1 (MQ=255)

                                                                                                  aCGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCg   <  1:2958732/100‑1 (MQ=255)

                                                                                                   cGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGc  <  1:1385109/100‑1 (MQ=255)

                                                                                                   cGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGCCATCAATCAGCAGACGATCGc  >  2:2932897/1‑100 (MQ=255)

TTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGC  >  NC_000913/4629324‑4629522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.