New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 501448 =NA (NA)17 (0.130) 7/164 NT NA noncoding (5/84 nt) REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 501478 = NA (NA)noncoding (35/84 nt) REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 237 total aligned reads displayed.

CTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAT  >  NC_000913/501349‑501547
                                                                                                   |                                                                                                   
cTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTTGGATCGTTAAGTTATCGTCGGTTCGTAgg                                                                                                     >  1:1218670/1‑100 (MQ=255)
cTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAgg                                                                                                     >  1:2833147/1‑100 (MQ=255)
cTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAgg                                                                                                     >  1:1200665/1‑100 (MQ=255)
cTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAgg                                                                                                     <  1:3872656/100‑1 (MQ=255)
 tggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGc                                                                                                    <  1:1899201‑M1/2‑1 (MQ=255)
 tGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGc                                                                                                    >  1:1368981/1‑100 (MQ=255)
  gAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTGAGTTATCGTCGGTTCGTAGGcc                                                                                                   >  2:2787789/1‑100 (MQ=255)
  gAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGcc                                                                                                   >  1:2993741/1‑100 (MQ=255)
  gAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGcc                                                                                                   >  1:1258792/1‑100 (MQ=255)
   gtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCa                                                                                                  <  1:932436‑M1/4‑1 (MQ=255)
   gtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCa                                                                                                  >  1:509308‑M1/97‑100 (MQ=255)
    aCCAGCATTCACCTCGTTTCACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTCAGTTATCGTCGGTTCGTAGGCCAg                                                                                                 >  2:1069930/1‑100 (MQ=255)
    aCCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAg                                                                                                 >  2:645166/1‑100 (MQ=255)
     gacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAg                                                                                                 >  2:3301756‑M1/95‑99 (MQ=255)
     ccAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGa                                                                                                >  2:3420512/1‑100 (MQ=255)
     ccAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGa                                                                                                >  1:3682743/1‑100 (MQ=255)
       aGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAATAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATa                                                                                              <  2:2293461/100‑1 (MQ=255)
       aGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATa                                                                                              >  2:3562260/1‑100 (MQ=255)
        gCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATaa                                                                                             >  1:2595623/1‑100 (MQ=255)
          aTTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAgg                                                                                           <  1:1672910/100‑1 (MQ=255)
          aTTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAgg                                                                                           <  1:267797/100‑1 (MQ=255)
            tCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGAGCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGc                                                                                          <  2:1182947/99‑1 (MQ=255)
             cACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGt                                                                                        <  1:4055370/100‑1 (MQ=255)
             cACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGt                                                                                        <  1:670360/100‑1 (MQ=255)
              aCCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGCGCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCggt                                                                                       >  2:2511316/1‑98 (MQ=255)
              aCCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGtt                                                                                       >  1:2422837/1‑100 (MQ=255)
               ccTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTc                                                                                      >  2:1260885/1‑100 (MQ=255)
               ccTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTc                                                                                      >  1:256680/1‑100 (MQ=255)
                 tCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCAc                                                                                    <  1:3083175/100‑1 (MQ=255)
                  cGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCAcg                                                                                   >  1:3748485/1‑100 (MQ=255)
                   gTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGATCGTTCAGTTATCGTAGGCTCGTAGGCCAGATAAGGCGTTCAcgcc                                                                                 >  2:279914/1‑100 (MQ=255)
                            gcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTgg                                                                         <  2:1543863/100‑1 (MQ=255)
                            gatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTgg                                                                         >  1:788679‑M1/72‑100 (MQ=255)
                             cgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                        >  2:2837350/1‑100 (MQ=255)
                             atgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                        >  1:86497‑M1/71‑100 (MQ=255)
                             atgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                        >  1:1776548‑M1/71‑100 (MQ=255)
                             atgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                        >  1:1131924‑M1/71‑100 (MQ=255)
                             atgtaaaatatgaaaaagatgtaggcatgataagacgcgccagcgtcgcagcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                        >  1:2267918‑M1/71‑100 (MQ=255)
                              ggCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAATTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                       <  2:2436145/100‑1 (MQ=255)
                               gtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                      >  2:86202‑M1/69‑100 (MQ=255)
                                taaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                     >  2:1889408‑M1/68‑100 (MQ=255)
                                cTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCCGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                     >  2:2539116/1‑100 (MQ=255)
                                cTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                     >  1:1578546/1‑100 (MQ=255)
                                 ttGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAttt                                                                    >  2:3709444/1‑100 (MQ=255)
                                  tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                   <  1:1095959/100‑1 (MQ=255)
                                  tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                   >  1:1733190/1‑100 (MQ=255)
                                  tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACACCGCATCTGGCATTTg                                                                   <  1:3536171/100‑1 (MQ=255)
                                   gCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                  <  2:2660074/100‑1 (MQ=255)
                                    ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTGATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                  >  2:3721596/1‑99 (MQ=255)
                                      ggAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGctc                                                               >  2:2356419/1‑100 (MQ=255)
                                       gAGCGAGAAGATGCCCTAGAAGTGTGGTAGTGCCATCGTTAAGTTATCGTCGGTTCGTATGCCAGATAAGCCGTTCATGGCGCGTGGCGCATTTGGc                                                                 <  2:1435829/97‑1 (MQ=255)
                                        aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                             >  2:3401227/1‑100 (MQ=255)
                                        aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                             <  1:1503821/100‑1 (MQ=255)
                                         gCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGGTAAGTTATCGTCGGTTCGTAGGCCCGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCg                                                            >  2:2003421/1‑100 (MQ=255)
                                          catGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGa                                                           <  2:3535182/98‑1 (MQ=255)
                                          cGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGa                                                           >  2:789009/1‑100 (MQ=255)
                                              aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                       >  2:1953708/1‑100 (MQ=255)
                                              aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                       <  1:2582602/100‑1 (MQ=255)
                                                 aCAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGa                                                    <  1:2457058/100‑1 (MQ=255)
                                                  cAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGAt                                                   >  1:3798647/1‑100 (MQ=255)
                                                   ctccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATg                                                  <  2:580377/98‑1 (MQ=255)
                                                    gCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGc                                                 <  2:2962487/100‑1 (MQ=255)
                                                    gCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGc                                                 >  1:3223781/1‑100 (MQ=255)
                                                     ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATgag                                                >  1:580609/1‑98 (MQ=255)
                                                     ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCg                                                >  1:1818735/1‑100 (MQ=255)
                                                     ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCg                                                >  1:4135563/1‑100 (MQ=255)
                                                        ggAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACg                                             >  1:2102285/1‑100 (MQ=255)
                                                           agagTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTg                                          <  2:1322614/100‑1 (MQ=255)
                                                              gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                       <  2:1029956/100‑1 (MQ=255)
                                                              gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                       >  1:1284672/1‑100 (MQ=255)
                                                              gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                       <  1:4084751/100‑1 (MQ=255)
                                                                cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGcgcg                                     <  1:2356432/100‑1 (MQ=255)
                                                                cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGcgcg                                     <  1:1705670/100‑1 (MQ=255)
                                                                  tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                   <  2:1683867/100‑1 (MQ=255)
                                                                  tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                   <  1:3104557/100‑1 (MQ=255)
                                                                  tACTGGGAGCGTTAAGTTATCGTCGGTACGTAAGTGAGATAAGGCGTTCAAGCCGGATCTGGCATGTGGCTGTCGATGTCTAATGCGACACTGGCGCGTc                                   <  2:756613/100‑1 (MQ=255)
                                                                    cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                 >  2:3092162/1‑100 (MQ=255)
                                                                    cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGCCGCTCGCTGCCTGATGCGACGCTGGCGCGTCtt                                 >  2:3883848/1‑100 (MQ=255)
                                                                         aTCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCAt                            <  1:1806901/100‑1 (MQ=255)
                                                                            gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                         >  2:2718925/1‑100 (MQ=255)
                                                                            gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                         <  2:2244639/100‑1 (MQ=255)
                                                                               ccgatctcgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc                      <  2:558553/94‑1 (MQ=255)
                                                                                aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                     <  2:3118899/100‑1 (MQ=255)
                                                                                 gTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACat                    <  2:2993722/100‑1 (MQ=255)
                                                                                 gTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACat                    >  2:453062/1‑100 (MQ=255)
                                                                                    aTCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtt                 >  1:1011135/1‑100 (MQ=255)
                                                                                     tcgtggGTTCGTAGGCCAGATAAGGCGTTCACGCCGCAACTGGCATGTGGCTCACGGTGCATGATGCGACGCTGGCGCGTCGTATCATGCCTCCATAttt                >  2:583694/1‑100 (MQ=21)
                                                                                      cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACagatcgg               >  1:558558/1‑94 (MQ=255)
                                                                                      cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGAGCGTCTTATCATGCCTACATAtttt               <  1:3229157/100‑1 (MQ=255)
                                                                                       gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt              <  2:320576/100‑1 (MQ=255)
                                                                                       gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt              >  1:1074742/1‑100 (MQ=255)
                                                                                       gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTAGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt              >  1:2054104/1‑100 (MQ=255)
                                                                                         cgGTTCGTAGGCCAGATAAGGCGTTCGCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt              <  2:2134884/98‑1 (MQ=255)
                                                                                          aatatgTAGGCCAGATAAGGCGTTCCCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCat           <  1:1964374/95‑1 (MQ=255)
                                                                                                tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa     <  2:2313353/100‑1 (MQ=255)
                                                                                                 aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTAc    >  1:3314841/1‑100 (MQ=255)
                                                                                                 aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTAc    >  2:3970137/1‑100 (MQ=255)
                                                                                                  ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACa   >  2:3689297/1‑100 (MQ=255)
                                                                                                   GCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt  <  1:3418149‑M1/100‑1 (MQ=255)
                                                                                                   GCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt  <  2:664203‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAT  >  NC_000913/501349‑501547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.