BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	501448 =	NA (NA)	17 (0.130)	7/164	NT	NA	noncoding (5/84 nt)	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	501478 =	NA (NA)	17 (0.130)	7/164	NT	NA	noncoding (35/84 nt)	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 218 total aligned reads displayed.

GGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACC  >  NC_000913/501379‑501577

 gtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                    >  2:86202‑M1/69‑100 (MQ=255)

 gCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                    >  1:3950500/1‑100 (MQ=255)

  taaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  2:1889408‑M1/68‑100 (MQ=255)

  cTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  1:1570622/1‑100 (MQ=255)

  cTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCATACTGGGACCGTTAAGTTATCGTCGGTTCGTAGGCCAGCTAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  2:2483619/1‑100 (MQ=255)

    tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                                                 <  1:1095959/100‑1 (MQ=255)

    tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACACCGCATCTGGCATTTg                                                                                                 <  1:3536171/100‑1 (MQ=255)

     aatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatgccagataaggcgttcacgccgcatctggcATTTgg                                                                                                <  1:782381‑M2/6‑1 (MQ=255)

      ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                                               <  1:861004/100‑1 (MQ=255)

      ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                                               <  2:3172341/100‑1 (MQ=255)

      atatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatgccagataaggcgttcacgccgcatctggcATTTGGc                                                                                               <  1:72704‑M2/7‑1 (MQ=255)

       cGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTAGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGct                                                                                              >  2:640586/1‑100 (MQ=255)

         gAGCGAGAAGATGCCCTAGAAGTGTGGTAGTGCCATCGTTAAGTTATCGTCGGTTCGTATGCCAGATAAGCCGTTCATGGCGCGTGGCGCATTTGGc                                                                                               <  2:1435829/97‑1 (MQ=255)

          aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                                                           <  1:174791/100‑1 (MQ=255)

          aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                                                           <  1:1503821/100‑1 (MQ=255)

          aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                                                           >  2:3401227/1‑100 (MQ=255)

           gCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                                                           <  2:2029846/99‑1 (MQ=255)

              tGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATg                                                                                       >  2:1543433/1‑100 (MQ=255)

              tGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATg                                                                                       <  1:3336313/100‑1 (MQ=255)

                aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                                                     <  1:1806943/100‑1 (MQ=255)

                aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                                                     <  1:2582602/100‑1 (MQ=255)

                 aGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCt                                                                                    >  2:560420/1‑100 (MQ=255)

                   aCAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGa                                                                                  <  1:2457058/100‑1 (MQ=255)

                    cAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGAt                                                                                 >  1:3798647/1‑100 (MQ=255)

                    cAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGAt                                                                                 <  1:3017222/100‑1 (MQ=255)

                     ctccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATg                                                                                <  2:580604/98‑1 (MQ=255)

                      gCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGc                                                                               <  2:683925/100‑1 (MQ=255)

                      gCCTGGAAGAGTCTCACTGGGTTCGCCAGGTTACCGTCCTCTCGTGCGCCAGATAACACGTTCACGCCGCATCTGGCCTACGGATCGCGATGCCCCATGc                                                                               >  2:3455075/1‑100 (MQ=255)

                       ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATgag                                                                              >  1:580382/1‑98 (MQ=255)

                       ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCg                                                                              >  1:4135563/1‑100 (MQ=255)

                       ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCg                                                                              <  2:3710372/100‑1 (MQ=255)

                        cTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGa                                                                             >  1:1616691/1‑100 (MQ=255)

                          ggAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACg                                                                           >  1:1124868/1‑100 (MQ=255)

                          ggAAGAGTCGTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGan                                                                            <  2:3947975/99‑2 (MQ=255)

                           gAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGc                                                                          >  2:2825973/1‑100 (MQ=255)

                                gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                                                     >  1:1284672/1‑100 (MQ=255)

                                gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                                                     <  2:1029956/100‑1 (MQ=255)

                                  cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGcgcg                                                                   <  1:2356432/100‑1 (MQ=255)

                                    tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                                                 <  2:1683867/100‑1 (MQ=255)

                                    tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                                                 <  1:3104557/100‑1 (MQ=255)

                                    tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                                                 <  1:2304833/100‑1 (MQ=255)

                                    tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                                                 >  1:2609802/1‑100 (MQ=255)

                                    tACTGGGAGCGTTAAGTTATCGTCGGTACGTAAGTGAGATAAGGCGTTCAAGCCGGATCTGGCATGTGGCTGTCGATGTCTAATGCGACACTGGCGCGTc                                                                 <  2:756613/100‑1 (MQ=255)

                                     aCTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCt                                                                <  1:1726133/100‑1 (MQ=255)

                                      cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                                               >  2:3706248/1‑100 (MQ=255)

                                      cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                                               >  2:3092162/1‑100 (MQ=255)

                                         ggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGTGACGCTGGCGCGTCTTATc                                                            <  1:1248848/100‑1 (MQ=255)

                                         ggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                            <  2:76196/100‑1 (MQ=255)

                                            tCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATg                                                         <  2:3339113/100‑1 (MQ=255)

                                             cGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGc                                                        <  2:2416515/100‑1 (MQ=255)

                                                 aaGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc                                                    <  2:1200657/100‑1 (MQ=255)

                                                  aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                                                   <  1:2078451/100‑1 (MQ=255)

                                                  aGTTAGCGTCGGTTCGTAGGCCATATAAGGCGATCACGCCGCATCTGGCATTTGGCTCTAGAGGCCTGATGCGACGCTGGGGCGTCTTATCATg                                                         >  2:2883658/1‑94 (MQ=21)

                                                      aTCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtt                                               >  1:1011135/1‑100 (MQ=255)

                                                        cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACagatcgg                                             >  1:558558/1‑94 (MQ=255)

                                                        cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGAGCGTCTTATCATGCCTACATAtttt                                             <  1:3229157/100‑1 (MQ=255)

                                                         gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt                                            <  1:1209253/100‑1 (MQ=255)

                                                         gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt                                            >  2:464175/1‑100 (MQ=255)

                                                         gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt                                            >  1:1074742/1‑100 (MQ=255)

                                                         gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt                                            >  2:1342414/1‑100 (MQ=255)

                                                          tcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTc                                           <  2:3254263/100‑1 (MQ=255)

                                                           cgGTTCGTAGGCCAGATAAGGCGTTCGCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt                                            <  2:2134884/98‑1 (MQ=255)

                                                           cgGTTCGTAGGCCAGATAAGGCGTTCCCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTCGCGCGTCTTATCATGCCTACATATTTTTCa                                          <  1:2889076/100‑1 (MQ=255)

                                                           cgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCa                                          <  1:1155419/100‑1 (MQ=255)

                                                            aatatgTAGGCCAGATAAGGCGTTCCCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCat                                         <  1:1964374/95‑1 (MQ=255)

                                                              gccaaatGCCAGATGCGGCGTGAACGCCTTATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCatat                                       <  2:374507‑M1/93‑1 (MQ=255)

                                                                  tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCTACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa                                   >  2:2654985/1‑100 (MQ=255)

                                                                  tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa                                   >  2:1965/1‑100 (MQ=255)

                                                                  tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa                                   <  2:2313353/100‑1 (MQ=255)

                                                                  tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa                                   >  2:2984199/1‑100 (MQ=255)

                                                                  tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa                                   >  2:2781589/1‑100 (MQ=255)

                                                                  aatgccagatgcggcgtgaacgccttatctggcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa                                   >  1:3198213‑M2/34‑100 (MQ=255)

                                                                    ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACa                                 >  2:3689297/1‑100 (MQ=255)

                                                                    ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACa                                 >  2:1322607/1‑100 (MQ=255)

                                                                     gccagatgcggcgtgaacgccttatctggcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt                                >  1:1776548‑M2/31‑100 (MQ=255)

                                                                     gccagatgcggcgtgaacgccttatctggcAGTTGGCTCTCGATGCCTGATGCGAAGCTCGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt                                >  1:2014576‑M2/31‑100 (MQ=255)

                                                                     GCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt                                >  1:2549034‑M1/1‑100 (MQ=255)

                                                                       CAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt                                <  2:441747‑M1/98‑1 (MQ=255)

                                                                         GATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCgg                            >  1:3737513‑M1/1‑100 (MQ=255)

                                                                         GATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCgg                            >  1:308496‑M1/1‑100 (MQ=255)

                                                                          ATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGc                           >  2:222620‑M1/1‑100 (MQ=255)

                                                                           TAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCa                          >  2:2595607‑M1/1‑100 (MQ=255)

                                                                             aGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAac                        <  1:668466/100‑1 (MQ=255)

                                                                             aGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAac                        <  2:1549721/100‑1 (MQ=255)

                                                                              ggCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTTATATTTTACATCCGGCAacc                       <  2:2523823/100‑1 (MQ=255)

                                                                                cGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAaccac                     >  1:3813685/1‑100 (MQ=255)

                                                                                    cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGtt                 >  1:3271777/1‑100 (MQ=255)

                                                                                      cgccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTa               >  1:2723830/1‑100 (MQ=255)

                                                                                        ccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcc             >  2:3979099/1‑100 (MQ=255)

                                                                                         cgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAccc            <  1:3156388/100‑1 (MQ=255)

                                                                                          gcATCTGGCATTTGGTGCGCGATGCCGGAGGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcc             <  2:2717292/98‑1 (MQ=25)

                                                                                           tatctggcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCg          <  1:1889421‑M2/92‑1 (MQ=255)

                                                                                           cATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcccc           >  2:3619990/1‑99 (MQ=255)

                                                                                           cATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCg          >  2:2752399/1‑100 (MQ=255)

                                                                                              ctggcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTca       <  1:1441620‑M2/95‑1 (MQ=255)

                                                                                               tggcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcac      >  1:509308‑M2/5‑100 (MQ=255)

                                                                                               tggcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcac      >  1:2248690‑M2/5‑100 (MQ=255)

                                                                                               tggcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcac      <  1:932436‑M2/96‑1 (MQ=255)

                                                                                                 gcATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGtcaccn    <  1:4126167‑M2/98‑2 (MQ=255)

                                                                                                  cATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcaccac   >  2:1878425‑M2/2‑100 (MQ=255)

GGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACC  >  NC_000913/501379‑501577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.