BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	610152 =	NA (NA)	3 (0.020) +AATTTTCGTAG	3/156	NT	NA	noncoding (36/98 nt)	RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	= 3706060	NA (NA)	3 (0.020) +AATTTTCGTAG	3/156	NT	NA	noncoding (98/98 nt)	RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 158 total aligned reads displayed.

GGGGAGGGAGGTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGACGTTAG  >  NC_000913/610053‑610251

ggggAGGGAGGTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑cc                                                                                                     <  2:3010762/100‑1 (MQ=255)

ggggAGGGAGGTAGGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑cc                                                                                                     <  2:1323303/100‑1 (MQ=255)

 gggagggaGGTATGCGTAGTTTTCATATCGACCATAGTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCt                                                                                                    >  1:2909966/1‑100 (MQ=255)

  ggagggagGTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTg                                                                                                   >  2:3848558/1‑100 (MQ=255)

   gagggaggTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGc                                                                                                  <  2:2656543/100‑1 (MQ=255)

    agggaggTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCa                                                                                                 <  1:3079172/100‑1 (MQ=255)

     gggaggTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCaa                                                                                                >  2:1685566/1‑100 (MQ=255)

          gTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAatatat                                                                                           <  1:706259/100‑1 (MQ=255)

           tATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATAtt                                                                                          >  1:97957/1‑100 (MQ=255)

            aTGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTg                                                                                         >  2:4115656/1‑100 (MQ=255)

            aTGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTg                                                                                         <  1:3973984/100‑1 (MQ=255)

              gCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGaa                                                                                       >  1:2543328/1‑100 (MQ=255)

               cGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAAt                                                                                      <  1:3281555/100‑1 (MQ=255)

                gTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAAtt                                                                                     <  1:266662/100‑1 (MQ=255)

                 tAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTg                                                                                    <  1:2370238/100‑1 (MQ=255)

                  aGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTgg                                                                                   >  1:1112667/1‑100 (MQ=255)

                   gTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGc                                                                                  <  1:3516972/100‑1 (MQ=255)

                   gTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGc                                                                                  <  2:3509137/100‑1 (MQ=255)

                      ttCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAg                                                                               >  1:1269881/1‑100 (MQ=255)

                        cATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGAt                                                                             >  2:2019760/1‑100 (MQ=255)

                          tatCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGAttt                                                                           >  1:1560710/1‑100 (MQ=255)

                          tatCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAACATATTGAATTGGCAAGAttt                                                                           <  2:2521347/100‑1 (MQ=255)

                             caaCCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTg                                                                        >  1:2806376/3‑100 (MQ=255)

                             cGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTg                                                                        >  2:3856741/1‑100 (MQ=255)

                              gACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGt                                                                       >  2:3793223/1‑100 (MQ=255)

                              gACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGt                                                                       >  1:3115076/1‑100 (MQ=255)

                              gACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGt                                                                       >  2:2829676/1‑100 (MQ=255)

                                    atTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCg                                                                 >  2:38159/1‑100 (MQ=255)

                                    atTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCg                                                                 <  1:1797833/100‑1 (MQ=255)

                                     ttgtagaCTGATGACAAACCCAAAACTGCCTGATGCTCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTTAATTGGCAAGATTTTTGTAGGCCg                                                                 <  2:3150454/95‑1 (MQ=18)

                                     ttCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCgg                                                                <  2:1664395/100‑1 (MQ=255)

                                     ttCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCgg                                                                <  2:1096090/100‑1 (MQ=255)

                                       cGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACTTG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCggn                                                               <  2:2152427/99‑2 (MQ=255)

                                       cGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGAt                                                              >  1:2548693/1‑100 (MQ=255)

                                       cGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGAt                                                              >  2:2396943/1‑100 (MQ=255)

                                        gagaCTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATa                                                             <  1:2829692/100‑1 (MQ=255)

                                         agaCTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATaa                                                            >  1:1801985/1‑100 (MQ=255)

                                           aCTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAgg                                                          <  1:1445168/100‑1 (MQ=255)

                                            cTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGc                                                         >  1:1666626/1‑100 (MQ=255)

                                              gatgaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAATATTTTTGTAGGCCGGATAAGGCGt                                                       <  2:3077430/100‑1 (MQ=255)

                                              gatgaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGt                                                       >  1:709343/1‑100 (MQ=255)

                                              gatgaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGt                                                       <  1:2425547/100‑1 (MQ=255)

                                                tgaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGtt                                                      >  1:1474843/1‑99 (MQ=255)

                                                tgaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTc                                                     <  1:3358694/100‑1 (MQ=255)

                                                tgaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTc                                                     <  1:1957452/100‑1 (MQ=255)

                                                 gaCAAACGCAAAGCTGCCTGATGCGCTCGGCTTATCAGCCAAACATG‑G‑T‑CGTGCAATATATTGAATCGGGACCATTTTGATAGTCCTGATCAgga                                                         >  2:3410066/1‑94 (MQ=9)

                                                  aCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCAc                                                   <  2:920890/100‑1 (MQ=255)

                                                   cAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCAcg                                                  >  1:321334/1‑100 (MQ=255)

                                                   cAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCAcg                                                  >  1:1946818/1‑100 (MQ=255)

                                                     aaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCAcgcc                                                >  2:303678/1‑100 (MQ=255)

                                                       cGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCAcgccgc                                              <  1:1227188/100‑1 (MQ=255)

                                                       cGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCAcgccgc                                              >  1:2920443/1‑100 (MQ=255)

                                                        gCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCa                                             >  2:3385106/1‑100 (MQ=255)

                                                           caaCTGCATGATACGCTACGCTTATAAGATCTACATG‑G‑T‑CCTCCAATATATTCAACTGGCAAGATTTTTGTACGCCGGATAAGGCCTTCACGCCGCa                                             <  2:3639995/96‑1 (MQ=255)

                                                            aaCTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                         <  1:3555053/100‑1 (MQ=255)

                                                             aCTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCgg                                        <  1:1075811/100‑1 (MQ=18)

                                                              cTGCCTGATGCGCTATGCTTATCAGGCCTACATA‑G‑TCCCTGCAATATATTGAATTAGCAAG‑GTTTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGc                                       <  2:1419040/100‑1 (MQ=18)

                                                                gCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGcct                                     <  1:1418788/100‑3 (MQ=18)

                                                                gCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt                                     <  2:3430544/100‑1 (MQ=255)

                                                                gCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt                                     >  1:163682/1‑100 (MQ=255)

                                                                gCCTGATGCGCTACGCTTATCAGGCCTACATC‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTCTTGTACGCCCAACAAGGCGTTCACGCCGCATCCAGc                                       >  2:1138809/1‑98 (MQ=17)

                                                                gCCTCATGAGCTGCGCTTATCCGGCATACTAG‑GTT‑CCTGCAATATGTTGCACTTGCACCA‑TTTTGTAGGCCGGATGCGGCGTAAACGCCCTTTCCGGcc                                      <  2:1372483/99‑2 (MQ=2)

                                                                 ccTGATGCGCTACGCTTATCAGGCCTACACGTA‑T‑CCTGCAATATATTGAATTTGC‑AGGTTTTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGccta                                    <  2:3607066/100‑4 (MQ=18)

                                                                  ggcctgataagcgtagcgcatcaggcctacatggtcCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                                      <  2:3301643‑M1/64‑1 (MQ=255)

                                                                  cTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAGTATATTGAATTGGCAAGATTTTTGTAGGTCGGATGCGGCGTGAACGCCTTATCCGGcttac                                   <  1:2838427/100‑5 (MQ=18)

                                                                  cTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa                                   >  2:1744501/1‑100 (MQ=255)

                                                                   tGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaa                                  >  2:3680278/1‑100 (MQ=255)

                                                                   tGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaa                                  >  1:71841/1‑100 (MQ=255)

                                                                     aTGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCGGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAacg                                <  1:4127985/100‑1 (MQ=255)

                                                                        cgcTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAacgacg                             <  1:3793247/100‑1 (MQ=255)

                                                                        cgcTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAacgacg                             <  2:71841/100‑1 (MQ=255)

                                                                        cgcTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGAGTTCACGCCGCATCCGGCATGAacgacg                             >  1:3100618/1‑100 (MQ=255)

                                                                         gcTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCACGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGAcgc                            >  2:3572374/1‑100 (MQ=255)

                                                                         gcTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAacgacac                            >  2:2509382/1‑98 (MQ=255)

                                                                            aCGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTTTATGTTGGTTAAGGCGTTCACGCCGCATTCGGCATGAac                                 >  2:390967/1‑92 (MQ=21)

                                                                            aCGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCATGCCGCATCCGGCATGAACGACGCGCa                         <  1:2509396/100‑1 (MQ=255)

                                                                             cGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCAc                        >  2:1745355/1‑100 (MQ=255)

                                                                                 tATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTg                    >  1:1730433/1‑100 (MQ=255)

                                                                                 tATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTg                    >  1:2079906/1‑100 (MQ=255)

                                                                                  aTCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGCTTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGt                   >  2:687803/1‑100 (MQ=255)

                                                                                    cAGGCTTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTca                 <  2:3956587/100‑1 (MQ=255)

                                                                                    cAGGCCTACATG‑G‑T‑CCTGCAATATACTGAATTGGCAAGATTTTTGTAGGCCGGATAATGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGtaa                 <  1:2796968/100‑3 (MQ=255)

                                                                                     aGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTcan                <  1:115763/100‑2 (MQ=255)

                                                                                     aGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTcaa                >  1:3479956/1‑100 (MQ=255)

                                                                                     aGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTcaa                >  2:81240/1‑100 (MQ=255)

                                                                                     aGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTcaa                >  2:827672/1‑100 (MQ=255)

                                                                                      ggCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTcaac               >  1:3546657/1‑100 (MQ=255)

                                                                                      ggCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTcaac               >  2:3442682/1‑100 (MQ=255)

                                                                                        ccTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTcaacaa             >  1:1600668/1‑100 (MQ=255)

                                                                                          tACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATc           >  2:1239563/1‑100 (MQ=255)

                                                                                           aCATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCt          >  1:3718317/1‑100 (MQ=255)

                                                                                            cATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCt          >  2:2242628/1‑99 (MQ=255)

                                                                                            cATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTg         >  1:3681199/1‑100 (MQ=255)

                                                                                              tG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGAc       <  2:1267980/100‑1 (MQ=255)

                                                                                                 g‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTTTTTTCCTTTTAAGGCGTTCACGCCTCATACGTCATTCACGAGACGCACTTTTTCAACGATCTAACGt     >  2:2856057/1‑100 (MQ=255)

                                                                                                 g‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGACGt     >  1:1306911/1‑100 (MQ=255)

                                                                                                   t‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGAGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGACGtt    >  2:2287496/1‑100 (MQ=255)

                                                                                                   t‑CCTGCAATATATTGAATTGGCAAGACTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGACGtt    >  1:2519712/1‑100 (MQ=255)

                                                                                                     ccTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGACGTTa   <  1:982812/100‑1 (MQ=255)

                                                                                                      cTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGACGTTAg  >  2:1809342/1‑100 (MQ=255)

GGGGAGGGAGGTATGCGTAGTTTTCATATCGACCATATTCGAGACTGATGACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACATG‑G‑T‑CCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAACAATCTGACGTTAG  >  NC_000913/610053‑610251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.