New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 272965123 (0.160)27 (0.190) 10/168 NT 44.0% noncoding (1507/1542 nt) rrsG 16S ribosomal RNA of rrnG operon
?NC_000913 4209675 = 47 (0.340)noncoding (1529/1542 nt) rrsE 16S ribosomal RNA of rrnE operon

AGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACG  >  NC_000913/4209587‑4209774
                                                                                        |                                                                                                   
cacttttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctacggttGGATCAcctcct                                                                                          >  1:3693047‑M2/89‑100 (MQ=255)
          cagacaatctgtgtgagcactgcaaagaacgcttctttaaggtaaggaggtgatccaaccgtaggggatcctgcggttGGATCACCTCCTTACCTTAaag                                                                                <  1:2783846‑M2/22‑1 (MQ=255)
                                                 tGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGa                                         <  2:3305933/100‑1 (MQ=11)
                                                  gAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGaa                                        <  2:3593094/100‑1 (MQ=31)
                                                  gAAGTCGTAACAAGGTAACAGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACCGATTGTCTGATAGaa                                        >  2:4036516/1‑100 (MQ=9)
                                                    aGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAg                                      <  2:1653645/100‑1 (MQ=32)
                                                     gTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGTAGCGTTCTTTGCAGTGCTCACACAGATTCTCTGATAGaaatt                                     <  1:2798973/100‑3 (MQ=255)
                                                      tCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTg                                    <  2:1821118/100‑1 (MQ=33)
                                                       cGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACTTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAg                                      >  2:3078063/1‑97 (MQ=17)
                                                       cGTAACAAGCTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGa                                   >  2:3188936/1‑100 (MQ=17)
                                                        gTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaa                                  >  2:3040421/1‑100 (MQ=33)
                                                        gTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaa                                  >  2:1094126/1‑100 (MQ=32)
                                                         tAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGGTAGAAAGTGaaa                                 >  2:268278/1‑100 (MQ=17)
                                                         tAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaa                                 <  1:3800818/100‑1 (MQ=33)
                                                         tAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaa                                 <  2:3252138/100‑1 (MQ=33)
                                                         tAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaa                                 <  2:1860191/100‑1 (MQ=33)
                                                         tAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGATAGAAAGTGaaa                                 <  1:841660/100‑1 (MQ=17)
                                                         aggtgatccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGATGAAAatgagca                                >  2:1421436‑M2/32‑97 (MQ=255)
                                                          aaCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaaa                                <  1:1017380/100‑1 (MQ=33)
                                                          aaCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaaa                                <  1:1790023/100‑1 (MQ=33)
                                                           aCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAg                               <  2:3507009/100‑1 (MQ=33)
                                                           aCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAg                               >  1:1942741/1‑100 (MQ=33)
                                                            tgatccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGc                              >  2:2309070‑M2/29‑100 (MQ=255)
                                                            tgatccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGc                              >  1:843645‑M2/29‑100 (MQ=255)
                                                            cAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGc                              <  1:1404963/100‑1 (MQ=33)
                                                            cAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGc                              >  1:398439/1‑100 (MQ=33)
                                                             gatccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGACGCGTTCTTTGAAGTGCTCACACAGATTGTCTGATGaaaatgagcagta                             >  2:3863177‑M2/28‑93 (MQ=255)
                                                             gatccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCa                             >  1:3414877‑M2/28‑100 (MQ=255)
                                                             gatccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCa                             >  2:3408893‑M2/28‑100 (MQ=255)
                                                             gatccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCa                             >  1:1707166‑M2/28‑100 (MQ=255)
                                                              atccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGGAAGTGAAAAGCaa                            >  1:141597‑M2/27‑100 (MQ=255)
                                                              atccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGGAAGTGAAAAGCaa                            >  1:803282‑M2/27‑100 (MQ=255)
                                                              atccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGAtgaaaatgagcagtaaa                           >  2:992156‑M2/27‑92 (MQ=255)
                                                              atccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCaa                            >  1:1492893‑M2/27‑100 (MQ=255)
                                                              aGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGc                              <  2:2504286/98‑1 (MQ=33)
                                                               tccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGatgaaaatgagcagtaaaa                          >  1:3907616‑M2/26‑91 (MQ=255)
                                                               tccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg                           >  2:3953153‑M2/26‑100 (MQ=255)
                                                               tccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg                           >  1:2744502‑M2/26‑100 (MQ=255)
                                                               tccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCCCACACAGATTGTCTGATAGAAAGTGAaaagaaag                           >  2:1952479‑M2/26‑100 (MQ=255)
                                                               tccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAg                           >  1:836273‑M2/26‑100 (MQ=255)
                                                               ggTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg                           <  1:1345761/100‑1 (MQ=33)
                                                               ggTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg                           >  2:4028474/1‑100 (MQ=32)
                                                               ggTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCATACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg                           >  1:2916287/1‑100 (MQ=18)
                                                                gTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAgg                          >  1:1757436/1‑100 (MQ=33)
                                                                ccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGCAGCGTACCTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCaa                            >  2:475228‑M2/25‑98 (MQ=255)
                                                                ccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGGAAGTGAAAAGCaa                            >  2:3090142‑M2/25‑98 (MQ=255)
                                                                ccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAgg                          >  1:1524617‑M2/25‑100 (MQ=255)
                                                                ccaaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAgg                          >  1:3471596‑M2/25‑100 (MQ=255)
                                                                 tAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc                         <  1:958004/100‑1 (MQ=33)
                                                                 tAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc                         <  1:2594859/100‑1 (MQ=33)
                                                                 tAACAGTAGGGGAAACTGCGGTTGGATCACCTCATTACCTTAAAGAAGCATTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc                         <  2:3890046/100‑1 (MQ=11)
                                                                 caaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGc                         >  2:1364847‑M2/24‑100 (MQ=255)
                                                                 caaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc                         >  1:1328622‑M2/24‑100 (MQ=255)
                                                                 caaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc                         >  1:623699‑M2/24‑100 (MQ=255)
                                                                  aaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCg                        >  1:1749226‑M2/23‑100 (MQ=255)
                                                                  aaccgcaggttcccctacggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAgg                          >  1:3129013‑M2/23‑98 (MQ=255)
                                                                  aaCCGTAGGGGAACCTGCGGTTGGATCACCTCATTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCg                        >  2:1021843/1‑100 (MQ=18)
                                                                    ccGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGACCGTGAAAAGCAAGGCg                        >  2:3522722/1‑98 (MQ=12)
                                                                    ccGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTc                      >  2:2374546/1‑100 (MQ=33)
                                                                      gTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCtt                    >  2:2919845/1‑100 (MQ=33)
                                                                       tAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTg                   <  2:2027372/100‑1 (MQ=33)
                                                                       tAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTg                   <  1:727085/100‑1 (MQ=32)
                                                                        aGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGc                  <  2:2165732/100‑1 (MQ=33)
                                                                        aGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGc                  <  2:1719576/100‑1 (MQ=33)
                                                                        aGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGc                  <  1:669163/100‑1 (MQ=33)
                                                                         ggggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCg                 >  2:579212/1‑100 (MQ=32)
                                                                         ggggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCg                 <  1:1430843/100‑1 (MQ=33)
                                                                          gggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGa                >  1:4008972/1‑100 (MQ=33)
                                                                            gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAATCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAg              <  1:2902992/100‑1 (MQ=18)
                                                                            gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTTTGATAGAAAGTGAAAAGCAAGGCGTCTTGCg                 <  2:1070814/97‑1 (MQ=17)
                                                                            gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAg              <  1:759093/100‑1 (MQ=33)
                                                                            gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAg              <  1:840833/100‑1 (MQ=33)
                                                                            gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAg              <  2:3983876/100‑1 (MQ=33)
                                                                            gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAg              >  1:831392/1‑100 (MQ=33)
                                                                               ccagCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg           >  2:1987487/4‑100 (MQ=18)
                                                                               ccTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg           >  1:745807/1‑100 (MQ=33)
                                                                               ccTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg           >  1:230036/1‑100 (MQ=33)
                                                                               ccTGCGGGTGAATTACCTACTGAGCGTAAAGAAGCGTTCTTTGCAGTGATCACACAGATTGTCGGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg           <  2:3454355/100‑1 (MQ=11)
                                                                                cTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGa          >  2:506112/1‑100 (MQ=33)
                                                                                 tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc         <  2:149425/100‑1 (MQ=32)
                                                                                 tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc         <  1:2085571/100‑1 (MQ=33)
                                                                                 tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc         >  2:3559535/1‑100 (MQ=32)
                                                                                 tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc         >  1:331611/1‑100 (MQ=32)
                                                                                 tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc         >  2:3209001/1‑100 (MQ=33)
                                                                                  gCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATCGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACt        <  2:69127/100‑1 (MQ=18)
                                                                                  gCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACt        <  2:2279727/100‑1 (MQ=32)
                                                                                  gCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACt        <  1:459622/100‑1 (MQ=33)
                                                                                   cggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTg       <  2:3318528‑M2/95‑1 (MQ=255)
                                                                                   cggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTg       >  2:2918516‑M2/6‑100 (MQ=255)
                                                                                    ggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGa      >  1:2368888‑M2/5‑100 (MQ=255)
                                                                                    ggttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGa      <  1:3530248‑M2/96‑1 (MQ=255)
                                                                                     gttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGAt     >  1:1985094‑M2/4‑100 (MQ=255)
                                                                                      ttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATa    <  1:2671488‑M2/98‑1 (MQ=255)
                                                                                      ttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATa    <  2:505608‑M2/98‑1 (MQ=255)
                                                                                      ttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCGGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATa    <  2:3583614‑M2/98‑1 (MQ=255)
                                                                                       tGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATAc   <  1:2550213‑M2/99‑1 (MQ=255)
                                                                                        ggATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATAc   >  2:3462210/1‑99 (MQ=33)
                                                                                        ggATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACg  >  2:1672521/1‑100 (MQ=32)
                                                                                        |                                                                                                   
AGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACG  >  NC_000913/4209587‑4209774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.