New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2794135NA (NA)13 (0.090) 10/168 NT NA noncoding (108/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 = 2794163 NA (NA)noncoding (136/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 186 total aligned reads displayed.

GGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGC  >  NC_000913/2794064‑2794259
                                                                                                   |                                                                                                
gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                                                  >  1:588736‑M2/1‑100 (MQ=255)
gggATCCAGGTCGGATAAGGCGTTTACGCCGCAGCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                                                  >  2:1649620‑M2/1‑100 (MQ=255)
 ggATCCGGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCa                                                                                                 <  1:4060940/100‑1 (MQ=255)
 ggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCa                                                                                                 >  1:225102/1‑100 (MQ=255)
 ggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCa                                                                                                 <  2:1830844/100‑1 (MQ=255)
   aTCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaa                                                                                               >  1:1478434/1‑100 (MQ=255)
      cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                                            <  2:1962580/100‑1 (MQ=255)
        ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                          >  1:1545047/1‑100 (MQ=255)
          tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                                                        <  1:3618961/100‑1 (MQ=255)
            ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCACTCTCCGGCAAAAAGAATCaa                                                                                      >  2:1449626/1‑100 (MQ=255)
              aTAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATa                                                                                    <  1:3345930/100‑1 (MQ=255)
              aTAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATa                                                                                    <  1:2500666/100‑1 (MQ=255)
                  ggCGTTTGCGCAGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGGGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                >  2:2172637/1‑100 (MQ=255)
                  ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                >  1:3997/1‑100 (MQ=255)
                  ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                >  2:1488853/1‑100 (MQ=255)
                  ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                <  2:3176255/100‑1 (MQ=255)
                  ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCGATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                <  2:79454/100‑1 (MQ=255)
                  ggCGTTTAAGCCGCATCAGACAGTCTGTATGTGAACAGGAAGAAATCTATGTTGCCCGGGTAAGGGGAAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                >  2:1014786/1‑100 (MQ=255)
                      tttACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATtat                                                                            >  2:1567361/1‑100 (MQ=255)
                      tttACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATtat                                                                            >  1:3712736/1‑100 (MQ=255)
                       ttACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATtata                                                                           <  2:2864960/100‑1 (MQ=255)
                          cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgc                                                                        >  1:3459284/1‑100 (MQ=255)
                          cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgc                                                                        >  2:2356042/1‑100 (MQ=255)
                          cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTATCCGGCAAAAAGAATCAATAACAATTATAcgc                                                                        >  2:230673/1‑100 (MQ=255)
                           gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                                                       >  1:3088058/1‑100 (MQ=255)
                            ccgcATCCGACAATCTGTACGTGAACAGGAAGAGATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGt                                                                      >  2:2732455/1‑100 (MQ=255)
                             cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                                                     <  2:1362864/100‑1 (MQ=255)
                                aTCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAcc                                                                  >  1:2953197/1‑100 (MQ=255)
                                 tCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAccc                                                                 >  1:2160958/1‑100 (MQ=255)
                                   cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCTGGTAAGGCGGAGCCGCACTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                                               <  2:3826196/100‑1 (MQ=255)
                                   cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                                               >  1:1133672/1‑100 (MQ=255)
                                     aCAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcg                                                             <  2:648751/100‑1 (MQ=255)
                                      cAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcgc                                                            >  1:3278452/1‑100 (MQ=255)
                                       aaTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGcgcg                                                           >  1:2697917/1‑100 (MQ=255)
                                         tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                                         <  2:215333/100‑1 (MQ=255)
                                         tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                                         <  2:1042716/100‑1 (MQ=255)
                                           tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                                                       >  1:303973/1‑100 (MQ=255)
                                               cGTGAACAGGAAGAAAGCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                                                    <  2:3568908/99‑1 (MQ=255)
                                                gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTc                                                  <  1:287854/100‑1 (MQ=255)
                                                  gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                                                <  2:2449014/100‑1 (MQ=255)
                                                  gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                                                >  2:3871974/1‑100 (MQ=255)
                                                   aaCAGGAAGAAATCTATGTTGGCCGGGTATGGCTTAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTTTTCCGGCGCGGGAAATGTCggg                                               <  2:3691637/100‑1 (MQ=255)
                                                    aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                              <  2:4057453/100‑1 (MQ=255)
                                                     cacgaagaaATCTATGTTCGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAGAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                              <  2:2057224/96‑1 (MQ=255)
                                                     cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                                             <  1:2203145/100‑1 (MQ=255)
                                                     cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                                             <  1:2739825/100‑1 (MQ=255)
                                                      aGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcg                                            <  2:1759587/100‑1 (MQ=255)
                                                      aGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcg                                            <  2:3274016/100‑1 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATATGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                           >  2:1164323/1‑100 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                           <  2:43649/100‑1 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                           >  1:1085315/1‑100 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                           >  1:1412897/1‑100 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcg                                            >  2:2583262/1‑99 (MQ=255)
                                                         aagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGACAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                           >  2:1713329/1‑98 (MQ=255)
                                                            aaaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatcc                                      <  1:1512711‑M2/100‑61 (MQ=255)
                                                            aaaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTcc                                      >  1:2660045/1‑100 (MQ=255)
                                                             aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc                                     <  1:499582/100‑1 (MQ=255)
                                                               tCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCaa                                   >  1:3804571/1‑100 (MQ=255)
                                                                  aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                <  2:974822/100‑1 (MQ=255)
                                                                  aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                <  1:1910644/100‑1 (MQ=255)
                                                                    gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgga                              <  1:2760271‑M2/100‑69 (MQ=255)
                                                                    gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgga                              <  1:3540385‑M2/100‑69 (MQ=255)
                                                                    gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAGAAAGAATCAATAACAATTATACGCGTGACCCGGCGCAGGAAATGTCGGGGCGCTCTCCCAAGTGac                              >  2:2484749/1‑100 (MQ=255)
                                                                    gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac                              >  2:2271862/1‑100 (MQ=255)
                                                                    gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac                              >  2:922248/1‑100 (MQ=255)
                                                                    gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac                              >  1:1032279/1‑100 (MQ=255)
                                                                     ttGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacn                             <  2:3294393/100‑2 (MQ=255)
                                                                     tgggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGGGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGaca                             <  2:3346825/98‑1 (MQ=255)
                                                                      tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac                            >  1:320839/1‑100 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatcc                           <  2:253978‑M2/100‑72 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAGTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGgcac                            >  2:4135205/1‑99 (MQ=255)
                                                                        gCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccc                          <  1:1840173‑M2/100‑73 (MQ=255)
                                                                        gCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacacac                          >  1:855846/1‑100 (MQ=255)
                                                                          cGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACtt                        >  2:4077934/1‑100 (MQ=255)
                                                                           gggTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACtt                        >  2:2680387/1‑99 (MQ=255)
                                                                             gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                     <  1:2453341/100‑1 (MQ=255)
                                                                              tAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCga                    <  1:506723/100‑1 (MQ=255)
                                                                               aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACGATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCga                    <  2:180222/99‑1 (MQ=255)
                                                                               aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                   <  2:1461628/100‑1 (MQ=255)
                                                                               aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                   <  2:3784555/100‑1 (MQ=255)
                                                                               aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                   <  2:603566/100‑1 (MQ=255)
                                                                                aGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgaga                  <  2:2972283/100‑1 (MQ=255)
                                                                                aGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgaga                  <  2:3363455/100‑1 (MQ=255)
                                                                                aGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgaga                  >  2:3138232/1‑100 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                 <  2:1301860/100‑1 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                 >  2:3048540/1‑100 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                 >  1:1732090/1‑100 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                 <  2:122971/100‑1 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                 <  1:2040188/100‑1 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                 <  2:700154/100‑1 (MQ=255)
                                                                                        ccGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAg          <  1:4027081/100‑1 (MQ=255)
                                                                                         cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg         >  1:1627501/1‑100 (MQ=255)
                                                                                         cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg         >  2:2092106/1‑100 (MQ=255)
                                                                                         cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg         >  1:832073/1‑100 (MQ=255)
                                                                                             ctcCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgg     <  1:1331640/100‑1 (MQ=255)
                                                                                               ccGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgggg   >  1:74941/1‑100 (MQ=255)
                                                                                                cGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcagc  <  2:3618066‑M2/100‑97 (MQ=255)
                                                                                                cGGCcaacatagatttcttcctgttcacgtacagattggcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcagc  >  2:2622284‑M2/1‑4 (MQ=255)
                                                                                                cGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGc  <  2:3019571/100‑1 (MQ=255)
                                                                                                cGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGc  <  1:2331498/100‑1 (MQ=255)
                                                                                                   |                                                                                                
GGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGC  >  NC_000913/2794064‑2794259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.