New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3428910 =20 (0.140)13 (0.090) 10/168 NT 40.8% intergenic (‑148/‑326) rrsD/yrdA 16S ribosomal RNA of rrnD operon/bacterial transferase hexapeptide domain protein
?NC_000913 = 4207974 NA (NA)intergenic (‑442/‑173) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon

Only 100 of 210 total aligned reads displayed.

ACTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207885‑4208073
                                                                                         |                                                                                                   
aCTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgc                                                                                           <  2:371516/100‑1 (MQ=11)
aCTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgc                                                                                           >  2:3340349/1‑100 (MQ=11)
aCTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgc                                                                                           >  1:1501646/1‑100 (MQ=11)
aCTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATCCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgc                                                                                           >  2:2439734/1‑100 (MQ=11)
aCTTCACACAAACAGCCGGAAAGGAAAAAAAAAAAAATCATGAAATACAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAgaga                                                                                           >  2:802720/1‑97 (MQ=1)
  ttCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACGGTgcgc                                                                                         <  2:2323107/100‑1 (MQ=17)
    cacacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTa                                                                                       <  1:71502/100‑1 (MQ=33)
     acacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCAACTCGCGAAAGTGCGCTaa                                                                                      >  2:3013380/1‑100 (MQ=255)
       acaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAg                                                                                    <  1:1144553/100‑1 (MQ=38)
       acaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAg                                                                                    >  1:2329288/1‑100 (MQ=38)
        caAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTaa                                                                                      >  2:3486651/1‑97 (MQ=35)
         aaaCAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAACCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgcg                                                                                  <  2:2218279/100‑1 (MQ=255)
          aaCAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgcgc                                                                                 >  2:1358630/1‑100 (MQ=255)
             aGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTc                                                                              >  1:1282812/1‑100 (MQ=255)
              gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             >  2:1560250/1‑100 (MQ=255)
               ccGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGc                                                                            <  1:1623451/100‑1 (MQ=255)
               ccGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGc                                                                            <  1:3578357/100‑1 (MQ=255)
               ccGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGCGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGTGCGTCGc                                                                            >  2:2628937/1‑100 (MQ=255)
                cggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCa                                                                           <  1:2410095/100‑1 (MQ=255)
                cggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCa                                                                           <  2:2382543/100‑1 (MQ=255)
                 ggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCaa                                                                          >  1:2055439/1‑100 (MQ=255)
                  gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                         <  1:795672/100‑1 (MQ=255)
                  gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                         <  1:1447814/100‑1 (MQ=255)
                     cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                      <  1:2595024/100‑1 (MQ=255)
                     cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                      <  1:1486128/100‑1 (MQ=255)
                     cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                      >  1:471727/1‑100 (MQ=255)
                     cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                      <  1:3267332/100‑1 (MQ=255)
                      ggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCAGAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACGGc                                                                      <  2:218371/99‑1 (MQ=255)
                          gAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                 <  1:769225/100‑1 (MQ=255)
                          gAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                 <  1:662344/100‑1 (MQ=255)
                          gAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                 >  1:988123/1‑100 (MQ=255)
                           aacagaagaCTCCTGCAATTCAGTGTTTATTCCGAAAGCGGAAAGCGTAATATACGCCACCCCGCTTCAGTGCGCTAAAGCTCCTCGCAACTGCTCttc                                                                 <  2:3535291/96‑2 (MQ=9)
                           aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTa                                                                <  1:290825/100‑1 (MQ=255)
                            agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                               <  2:1492434/100‑1 (MQ=255)
                            agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                               >  1:2474097/1‑100 (MQ=255)
                             gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                              <  1:3744887/100‑1 (MQ=255)
                             gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                              <  2:1452875/100‑1 (MQ=255)
                              agaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACa                                                             >  2:1148156/1‑100 (MQ=255)
                               gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            >  2:3393343/1‑100 (MQ=255)
                               gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            >  2:1824799/1‑100 (MQ=255)
                                aaaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAt                                                           <  2:3855746/100‑1 (MQ=255)
                                 aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                          >  1:2366454/1‑100 (MQ=255)
                                  aaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAttt                                                         <  2:2261580/100‑1 (MQ=255)
                                   aaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTa                                                        <  2:1042660/100‑1 (MQ=255)
                                     tCCTGAAATTCAGGGTTTACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCCACAGTGCGCTAAATCGCGTCGCAACTGCTCTTTAACAATTTATc                                                      <  2:2704689/100‑1 (MQ=255)
                                      ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  2:1314465/100‑1 (MQ=255)
                                       cTGACATTCAGGGTTGACTCTGAAAGAGGAAAGCGTACTATACGCCACCTCGCGACAGTGCGCTAAAACGCGTCGCAACTGCTCTTCAACAATTTATCAg                                                    >  2:3140479/1‑100 (MQ=14)
                                       cTGAAATTCAGGGTTGACTTTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  2:557933/99‑1 (MQ=255)
                                       cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:1726533/1‑100 (MQ=255)
                                       cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:3922211/1‑100 (MQ=255)
                                         gAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGAc                                                  <  2:2148839/100‑1 (MQ=255)
                                           aaTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACaa                                                >  1:2046116/1‑100 (MQ=255)
                                             ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                              >  1:2974224/1‑100 (MQ=255)
                                             ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAGTTATCAGACAATc                                              >  2:662716/1‑100 (MQ=255)
                                              tCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCt                                             >  2:1800919/1‑100 (MQ=255)
                                                 gggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtg                                          <  1:2008001/100‑1 (MQ=255)
                                                     tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                      <  1:3699297/100‑1 (MQ=255)
                                                      gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                     >  2:333370/1‑100 (MQ=255)
                                                      gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                     <  2:4048572/100‑1 (MQ=255)
                                                      gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGCCGTAACTGCACTTTAACAATTTATCAGACAATCTGTGTGGGc                                     >  2:2900672/1‑100 (MQ=255)
                                                       aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                    >  2:2493791/1‑100 (MQ=255)
                                                       aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                    >  2:785893/1‑100 (MQ=255)
                                                         tctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACt                                  <  1:335190/100‑1 (MQ=255)
                                                          ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                 >  1:3141077/1‑100 (MQ=255)
                                                          ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                 >  2:2891379/1‑100 (MQ=255)
                                                           tGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCg                                >  2:3036938/1‑100 (MQ=255)
                                                            gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                               >  2:2367956/1‑100 (MQ=255)
                                                            gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                               >  1:3780400/1‑100 (MQ=255)
                                                            gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCCCTTTAACAACTTATCAGACAATCTGTGTGGGCACTCGa                               >  2:489075/1‑100 (MQ=255)
                                                             aaaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                              <  2:1550324/100‑1 (MQ=255)
                                                             aaaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                              >  2:1225753/1‑100 (MQ=255)
                                                              aaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg                             >  2:1614669/1‑100 (MQ=255)
                                                               agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                            >  2:677059/1‑100 (MQ=255)
                                                                gagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGAt                           <  1:1016011/100‑1 (MQ=255)
                                                                 agGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATa                          <  1:3486673/100‑1 (MQ=255)
                                                                  ggAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATAc                         >  1:2871104/1‑100 (MQ=255)
                                                                     aaGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGa                      >  1:851034/1‑100 (MQ=255)
                                                                      aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                     <  2:508860/100‑1 (MQ=255)
                                                                      aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                     <  1:3067863/100‑1 (MQ=255)
                                                                      aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                     <  1:1196796/100‑1 (MQ=255)
                                                                      aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                     <  1:408110/100‑1 (MQ=255)
                                                                         gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  >  1:1879582/1‑100 (MQ=255)
                                                                         gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  >  1:2376908/1‑100 (MQ=255)
                                                                           aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTAGCAGACAATCTGTGTGGGCCCTCGAAGATACGGATTCt                  <  2:2664099/98‑1 (MQ=255)
                                                                             tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              <  2:3999506/100‑1 (MQ=255)
                                                                             tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              >  1:3670597/1‑100 (MQ=255)
                                                                               taCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGt            >  2:3654874/1‑100 (MQ=255)
                                                                               taCGCCACCTCGCGACAATGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAGTTATCAGAAAATCTGTCTGGGCACTCGAAGATACGGATTATTAACGt            >  2:2251085/1‑100 (MQ=14)
                                                                                aCGCGACCTCGCGACAGTGCGAGAACGGGGGTAGCAACTGCTCAGTAACCATTTATCAGACGAGCGGTGTGGGGAGTCGAAGATGCGGATTCTGaa               <  2:2812810/96‑1 (MQ=255)
                                                                                aCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTc           >  2:3077777/1‑100 (MQ=255)
                                                                                 cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg          <  1:2657356/100‑1 (MQ=255)
                                                                                 cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg          <  1:1569444/100‑1 (MQ=255)
                                                                                  gCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg          >  2:2270792/1‑99 (MQ=255)
                                                                                   ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        <  2:1686516/100‑1 (MQ=255)
                                                                                   ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        >  1:2704907/1‑100 (MQ=255)
                                                                                   ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        <  1:1891608/100‑1 (MQ=255)
                                                                                      ccTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa     >  2:1187/1‑100 (MQ=255)
                                                                                       cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc    <  2:2005534/100‑1 (MQ=255)
                                                                                        tCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg   <  1:2038703/100‑1 (MQ=255)
                                                                                        tCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg   <  2:797430/100‑1 (MQ=255)
                                                                                         |                                                                                                   
ACTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207885‑4208073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.