New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4166489 =NA (NA)13 (0.090) 7/178 NT NA intergenic (+204/‑170) murI/rrsB glutamate racemase/16S ribosomal RNA of rrnB operon
?NC_000913 4208001 = NA (NA)intergenic (‑469/‑146) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon

Only 100 of 217 total aligned reads displayed.

GGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTC  >  NC_000913/4207902‑4208090
                                                                                                     |                                                                                         
 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGACAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAAc                                                                                          >  1:3976073/1‑100 (MQ=255)
 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAAc                                                                                          <  1:1447814/100‑1 (MQ=255)
 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAAc                                                                                          <  1:795672/100‑1 (MQ=255)
   tcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTg                                                                                        <  1:2124010/100‑1 (MQ=255)
   cttgcgacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGAGCTGAAAGCCGCGTCGCAAc                                                                                          >  1:1170681‑M1/71‑100 (MQ=255)
    ttgcgacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGc                                                                                       >  1:697740‑M1/70‑100 (MQ=255)
    ttgcgacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGAGCTGAAAGCCGCGTCGCAACt                                                                                         >  1:2265780‑M1/70‑100 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGc                                                                                       <  1:2431185/100‑1 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGc                                                                                       >  1:471727/1‑100 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGc                                                                                       <  1:3267332/100‑1 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGc                                                                                       <  1:2595024/100‑1 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGc                                                                                       <  1:1486128/100‑1 (MQ=255)
        gacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCtt                                                                                   >  1:727427‑M1/66‑100 (MQ=255)
         gAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCttt                                                                                  <  1:769225/100‑1 (MQ=255)
          aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTa                                                                                 <  1:290825/100‑1 (MQ=255)
          aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGACACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCttt                                                                                  >  1:2407379/1‑99 (MQ=255)
           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTaa                                                                                <  2:1492434/100‑1 (MQ=255)
            gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAAc                                                                               <  2:1452875/100‑1 (MQ=255)
             agaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACa                                                                              >  2:1148156/1‑100 (MQ=255)
               aaaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAAt                                                                            <  2:3073096/100‑1 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAAtt                                                                           <  1:2814183/100‑1 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAAtt                                                                           <  1:2044391/100‑1 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAAtt                                                                           <  2:3525257/100‑1 (MQ=255)
                 aaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAAtt                                                                           <  1:539503/99‑1 (MQ=255)
                  aaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTa                                                                         <  2:1042660/100‑1 (MQ=255)
                    tCCTGAAATTCAGGGTTTACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCCACAGTGCGCT‑AAATC‑GCGTCGCAACTGCTCTTTAACAATTTATc                                                                       <  2:2704689/100‑1 (MQ=255)
                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCa                                                                      >  2:182980/1‑100 (MQ=255)
                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCa                                                                      <  2:1314465/100‑1 (MQ=255)
                      cTGAAATTCAGGGTTGACTTTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCa                                                                      <  2:557933/99‑1 (MQ=255)
                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAg                                                                     >  1:1327789/1‑100 (MQ=255)
                       tGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGa                                                                    <  1:2879838/100‑1 (MQ=255)
                       tGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGa                                                                    >  2:2768318/1‑100 (MQ=255)
                        gAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGAc                                                                   <  2:2148839/100‑1 (MQ=255)
                           aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                                                >  2:1823994/1‑100 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                                               >  1:2974224/1‑100 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                                               >  2:2685929/1‑100 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                                               <  2:3569929/100‑1 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAAGTTATCAGACAATc                                                               >  2:662716/1‑100 (MQ=255)
                             tCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCt                                                              <  1:205523/100‑1 (MQ=255)
                              cAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtg                                                             <  1:1597632/100‑1 (MQ=255)
                                gggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtg                                                           <  1:2008001/100‑1 (MQ=255)
                                 ggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgt                                                          <  1:3335107/100‑1 (MQ=255)
                                    tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                                       <  1:3699297/100‑1 (MQ=255)
                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                                      <  1:2544015/100‑1 (MQ=255)
                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                                      <  2:4048572/100‑1 (MQ=255)
                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGCCGTAACTGCACTTTAACAATTTATCAGACAATCTGTGTGGGc                                                      >  2:2900672/1‑100 (MQ=255)
                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                                     >  2:785893/1‑100 (MQ=255)
                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                                     >  2:2493791/1‑100 (MQ=255)
                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGGCAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                                    >  2:2203656/1‑100 (MQ=255)
                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                                    >  2:3431800/1‑100 (MQ=255)
                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                                    >  2:2258668/1‑100 (MQ=255)
                                         ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                                  >  2:2891379/1‑100 (MQ=255)
                                         ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                                  >  1:96491/1‑100 (MQ=255)
                                           gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                                                >  1:3780400/1‑100 (MQ=255)
                                           gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                                                <  2:1799463/100‑1 (MQ=255)
                                            aaaGAGGAAAGCGTAATATACGCCACCTCGGGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                                               <  2:3909412/100‑1 (MQ=255)
                                            aaaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                                               <  2:1550324/100‑1 (MQ=255)
                                             aaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg                                              >  2:1614669/1‑100 (MQ=255)
                                              agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                                             <  2:2955774/100‑1 (MQ=255)
                                              agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                                             >  2:677059/1‑100 (MQ=255)
                                               gagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGAt                                            <  1:1016011/100‑1 (MQ=255)
                                                agGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATa                                           <  1:3486673/100‑1 (MQ=255)
                                                 ggAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATAc                                          >  2:2267232/1‑100 (MQ=255)
                                                    aaGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGa                                       <  2:324915/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCTCAACTGCTCTTTAACAAGTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  2:2643020/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  1:408110/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  1:3067863/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  2:508860/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  2:2224611/100‑1 (MQ=255)
                                                        gTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                                   >  1:2376908/1‑100 (MQ=255)
                                                        gTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                                   >  1:1879582/1‑100 (MQ=255)
                                                           atatACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTaa                                <  2:2376894/100‑1 (MQ=255)
                                                            tataCGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc                               <  2:3999506/100‑1 (MQ=255)
                                                            tataCGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc                               >  1:3670597/1‑100 (MQ=255)
                                                              taCGCCACCTCGCGACAGTGCGCT‑CAAGC‑GCGTCGCAACTGCTCCTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACg                              >  2:1380756/1‑99 (MQ=255)
                                                              taCGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGt                             >  2:3654874/1‑100 (MQ=255)
                                                               aCGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTc                            >  2:2310883/1‑100 (MQ=255)
                                                                cGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg                           <  1:1817208/100‑1 (MQ=255)
                                                                cGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg                           <  1:2657356/100‑1 (MQ=255)
                                                                cGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg                           <  1:1569444/100‑1 (MQ=255)
                                                                  ccACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa                         <  1:1891608/100‑1 (MQ=255)
                                                                  ccACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTCAACAATTTATCAGACAATCTGTGTGTGCACTCGAAGATTCGGACTCGTAAcgccgc                          <  2:336427/99‑1 (MQ=14)
                                                                    aCCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAg                       <  2:3093555/100‑1 (MQ=255)
                                                                     ccTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa                      >  2:1187/1‑100 (MQ=255)
                                                                      cTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc                     <  2:2005534/100‑1 (MQ=255)
                                                                       tCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg                    <  2:797430/100‑1 (MQ=255)
                                                                         GCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaa                  <  2:2030560‑M1/100‑1 (MQ=255)
                                                                          CGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaaa                 <  1:775589‑M1/100‑1 (MQ=255)
                                                                             CAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAAt              >  1:2691773‑M1/1‑100 (MQ=255)
                                                                             CAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAAt              <  1:803856‑M1/100‑1 (MQ=255)
                                                                              aGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGACAAAAAACGAAAAATg             <  2:3724708/100‑1 (MQ=14)
                                                                                tGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGaa           >  1:1255136/1‑100 (MQ=40)
                                                                                 gcgcT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAAt          <  2:3983204/100‑1 (MQ=40)
                                                                                  cgcT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATa         <  1:3825536/100‑1 (MQ=38)
                                                                                       aaaGC‑GCGTCGCAACTGCTCTTTAACGATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCaa     <  2:807440/100‑1 (MQ=18)
                                                                                       aaaGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCaa     >  1:3190093/1‑100 (MQ=33)
                                                                                        aaGC‑ACGTCGCAACTGCTATTAAACAATTAAACAGACAAACAGTGTGGGAACTAGAACATACGAATTCTTAAAATAAAAAAAAAAAAAATGAATACCAAg    <  2:2467182/100‑1 (MQ=2)
                                                                                         aGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGt   <  1:989494/100‑1 (MQ=31)
                                                                                         aGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGt   >  1:2084572/1‑100 (MQ=31)
                                                                                          gc‑gcGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtc  <  1:2354532/100‑1 (MQ=11)
                                                                                                     |                                                                                         
GGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCT‑AAAGC‑GCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTC  >  NC_000913/4207902‑4208090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.