New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4166489 =NA (NA)13 (0.090) 7/178 NT NA intergenic (+204/‑170) murI/rrsB glutamate racemase/16S ribosomal RNA of rrnB operon
?NC_000913 4208001 = NA (NA)intergenic (‑469/‑146) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon

Only 100 of 217 total aligned reads displayed.

GGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTC  >  NC_000913/4207902‑4208090
                                                                                                     |                                                                                         
 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGACAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                                          >  1:3976073/1‑100 (MQ=255)
 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                                          <  1:1447814/100‑1 (MQ=255)
 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                                          <  1:795672/100‑1 (MQ=255)
   tcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTg                                                                                        <  1:2124010/100‑1 (MQ=255)
   cttgcgacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGAGCTGAAAGCCGCGTCGCAAc                                                                                          >  1:1170681‑M1/71‑100 (MQ=255)
    ttgcgacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                                       >  1:697740‑M1/70‑100 (MQ=255)
    ttgcgacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGAGCTGAAAGCCGCGTCGCAACt                                                                                         >  1:2265780‑M1/70‑100 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                                       <  1:2431185/100‑1 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                                       >  1:471727/1‑100 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                                       <  1:3267332/100‑1 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                                       <  1:2595024/100‑1 (MQ=255)
    cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                                       <  1:1486128/100‑1 (MQ=255)
        gacgttaagaatccgtatcttcgagtgcccacacagattgtctgataaattgttaaagagcagttGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCtt                                                                                   >  1:727427‑M1/66‑100 (MQ=255)
         gAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                                  <  1:769225/100‑1 (MQ=255)
          aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTa                                                                                 <  1:290825/100‑1 (MQ=255)
          aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGACACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                                  >  1:2407379/1‑99 (MQ=255)
           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                                                <  2:1492434/100‑1 (MQ=255)
            gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                                               <  2:1452875/100‑1 (MQ=255)
             agaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACa                                                                              >  2:1148156/1‑100 (MQ=255)
               aaaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAt                                                                            <  2:3073096/100‑1 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                                           <  1:2814183/100‑1 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                                           <  1:2044391/100‑1 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                                           <  2:3525257/100‑1 (MQ=255)
                 aaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                                           <  1:539503/99‑1 (MQ=255)
                  aaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTa                                                                         <  2:1042660/100‑1 (MQ=255)
                    tCCTGAAATTCAGGGTTTACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCCACAGTGCGCTAAATCGCGTCGCAACTGCTCTTTAACAATTTATc                                                                       <  2:2704689/100‑1 (MQ=255)
                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                                      >  2:182980/1‑100 (MQ=255)
                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                                      <  2:1314465/100‑1 (MQ=255)
                      cTGAAATTCAGGGTTGACTTTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                                      <  2:557933/99‑1 (MQ=255)
                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                                     >  1:1327789/1‑100 (MQ=255)
                       tGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGa                                                                    <  1:2879838/100‑1 (MQ=255)
                       tGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGa                                                                    >  2:2768318/1‑100 (MQ=255)
                        gAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGAc                                                                   <  2:2148839/100‑1 (MQ=255)
                           aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                                                >  2:1823994/1‑100 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                                               >  1:2974224/1‑100 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                                               >  2:2685929/1‑100 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                                               <  2:3569929/100‑1 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAGTTATCAGACAATc                                                               >  2:662716/1‑100 (MQ=255)
                             tCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCt                                                              <  1:205523/100‑1 (MQ=255)
                              cAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtg                                                             <  1:1597632/100‑1 (MQ=255)
                                gggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtg                                                           <  1:2008001/100‑1 (MQ=255)
                                 ggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgt                                                          <  1:3335107/100‑1 (MQ=255)
                                    tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                                       <  1:3699297/100‑1 (MQ=255)
                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                                      <  1:2544015/100‑1 (MQ=255)
                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                                      <  2:4048572/100‑1 (MQ=255)
                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGCCGTAACTGCACTTTAACAATTTATCAGACAATCTGTGTGGGc                                                      >  2:2900672/1‑100 (MQ=255)
                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                                     >  2:785893/1‑100 (MQ=255)
                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                                     >  2:2493791/1‑100 (MQ=255)
                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGGCAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                                    >  2:2203656/1‑100 (MQ=255)
                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                                    >  2:3431800/1‑100 (MQ=255)
                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                                    >  2:2258668/1‑100 (MQ=255)
                                         ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                                  >  2:2891379/1‑100 (MQ=255)
                                         ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                                  >  1:96491/1‑100 (MQ=255)
                                           gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                                                >  1:3780400/1‑100 (MQ=255)
                                           gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                                                <  2:1799463/100‑1 (MQ=255)
                                            aaaGAGGAAAGCGTAATATACGCCACCTCGGGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                                               <  2:3909412/100‑1 (MQ=255)
                                            aaaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                                               <  2:1550324/100‑1 (MQ=255)
                                             aaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg                                              >  2:1614669/1‑100 (MQ=255)
                                              agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                                             <  2:2955774/100‑1 (MQ=255)
                                              agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                                             >  2:677059/1‑100 (MQ=255)
                                               gagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGAt                                            <  1:1016011/100‑1 (MQ=255)
                                                agGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATa                                           <  1:3486673/100‑1 (MQ=255)
                                                 ggAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATAc                                          >  2:2267232/1‑100 (MQ=255)
                                                    aaGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGa                                       <  2:324915/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCTCAACTGCTCTTTAACAAGTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  2:2643020/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  1:408110/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  1:3067863/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  2:508860/100‑1 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  2:2224611/100‑1 (MQ=255)
                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                                   >  1:2376908/1‑100 (MQ=255)
                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                                   >  1:1879582/1‑100 (MQ=255)
                                                           atatACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTaa                                <  2:2376894/100‑1 (MQ=255)
                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc                               <  2:3999506/100‑1 (MQ=255)
                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc                               >  1:3670597/1‑100 (MQ=255)
                                                              taCGCCACCTCGCGACAGTGCGCTCAAGCGCGTCGCAACTGCTCCTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACg                              >  2:1380756/1‑99 (MQ=255)
                                                              taCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGt                             >  2:3654874/1‑100 (MQ=255)
                                                               aCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTc                            >  2:2310883/1‑100 (MQ=255)
                                                                cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg                           <  1:1817208/100‑1 (MQ=255)
                                                                cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg                           <  1:2657356/100‑1 (MQ=255)
                                                                cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg                           <  1:1569444/100‑1 (MQ=255)
                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa                         <  1:1891608/100‑1 (MQ=255)
                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTCAACAATTTATCAGACAATCTGTGTGTGCACTCGAAGATTCGGACTCGTAAcgccgc                          <  2:336427/99‑1 (MQ=14)
                                                                    aCCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAg                       <  2:3093555/100‑1 (MQ=255)
                                                                     ccTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa                      >  2:1187/1‑100 (MQ=255)
                                                                      cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc                     <  2:2005534/100‑1 (MQ=255)
                                                                       tCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg                    <  2:797430/100‑1 (MQ=255)
                                                                         GCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaa                  <  2:2030560‑M1/100‑1 (MQ=255)
                                                                          CGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaaa                 <  1:775589‑M1/100‑1 (MQ=255)
                                                                             CAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAAt              >  1:2691773‑M1/1‑100 (MQ=255)
                                                                             CAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAAt              <  1:803856‑M1/100‑1 (MQ=255)
                                                                              aGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGACAAAAAACGAAAAATg             <  2:3724708/100‑1 (MQ=14)
                                                                                tGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGaa           >  1:1255136/1‑100 (MQ=40)
                                                                                 gcgcTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAAt          <  2:3983204/100‑1 (MQ=40)
                                                                                  cgcTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATa         <  1:3825536/100‑1 (MQ=38)
                                                                                       aaaGCGCGTCGCAACTGCTCTTTAACGATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCaa     <  2:807440/100‑1 (MQ=18)
                                                                                       aaaGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCaa     >  1:3190093/1‑100 (MQ=33)
                                                                                        aaGCACGTCGCAACTGCTATTAAACAATTAAACAGACAAACAGTGTGGGAACTAGAACATACGAATTCTTAAAATAAAAAAAAAAAAAATGAATACCAAg    <  2:2467182/100‑1 (MQ=2)
                                                                                         aGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGt   <  1:989494/100‑1 (MQ=31)
                                                                                         aGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGt   >  1:2084572/1‑100 (MQ=31)
                                                                                          gcgcGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtc  <  1:2354532/100‑1 (MQ=11)
                                                                                                     |                                                                                         
GGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTC  >  NC_000913/4207902‑4208090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.