BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	173504 =	NA (NA)	14 (0.100)	9/164	NT	NA	noncoding (1/85 nt)	REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	173536 =	NA (NA)	14 (0.100)	9/164	NT	NA	noncoding (33/85 nt)	REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 207 total aligned reads displayed.

GCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCG  >  NC_000913/173437‑173635

gccgttatatggaaaaattaacggccctgTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGcc                                                                                                     >  1:2922338‑M2/30‑100 (MQ=255)

atccagcatggtttgtcggatgcggcgtgaacgccttatccgacctacgattcggggccgtttgtagGCCCGATGCGACGCTGGCGCGTCTTATCGGGcc                                                                                                     >  1:419391‑M1/68‑100 (MQ=255)

atccagcatggtttgtcggatgcggcgtgaacgccttatccgacctacgattcggggccgtttgtagGCCCGATGCGACGCTGGCGCGTCTTATCGGGcc                                                                                                     >  1:2831034‑M1/68‑100 (MQ=255)

 ccGTTAATTTTTCCATATAACGGCGCTGTACGCGTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCt                                                                                                    <  2:3620204/100‑1 (MQ=255)

   gTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTAc                                                                                                  <  1:2528439/100‑1 (MQ=255)

   gTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTAc                                                                                                  >  2:2616271/1‑100 (MQ=255)

   gTTAAATTTTCCATATAACGGCCATGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGCGCCTan                                                                                                  <  2:2944309/100‑2 (MQ=255)

    ttAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACa                                                                                                 >  2:666919/1‑100 (MQ=255)

      aaTTTTTCCATATAACGGCCCTGTACGCCTGGACGGTTAAAGCGTTTACGCGCCAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACaa                                                                                                >  2:921288/1‑99 (MQ=255)

      aaTTTTTCCATATAACGGACCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGCTGCCCGATGCGACGCTGACCCGTCTTCTCGGGCCTACaaa                                                                                               >  2:1186122/1‑100 (MQ=38)

        tttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACg                                                                                             <  2:2873843/100‑1 (MQ=255)

        tttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACg                                                                                             <  1:2392621/100‑1 (MQ=255)

          tttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGc                                                                                           <  1:1651813/100‑1 (MQ=255)

           ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGcc                                                                                          >  1:1069773/1‑100 (MQ=255)

            tCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGccc                                                                                         >  1:2446535/1‑100 (MQ=255)

             ccATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGcccc                                                                                        <  1:1678807/100‑1 (MQ=255)

              cATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCg                                                                                       <  1:3843670/100‑1 (MQ=255)

                tataACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGaa                                                                                     >  2:2683039/1‑100 (MQ=255)

                   aaCGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATc                                                                                   <  2:3765595/99‑1 (MQ=255)

                     cGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATc                                                                                   <  2:2578634/97‑1 (MQ=255)

                     cGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTa                                                                                <  2:3286885/100‑1 (MQ=255)

                     cGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTa                                                                                >  1:3730292/1‑100 (MQ=255)

                     cGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTa                                                                                <  1:1025836/100‑1 (MQ=255)

                     cGGCCCTGTACGCCTGGACGGATAAAGCGTGTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTa                                                                                <  2:1381433/100‑1 (MQ=255)

                          ctgTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCg                                                                           <  2:1908839‑M2/97‑1 (MQ=255)

                             tACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGa                                                                         >  2:3302626/1‑99 (MQ=255)

                             tACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGAt                                                                        >  2:4063093/1‑100 (MQ=255)

                               cGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATa                                                                       >  2:106717/1‑99 (MQ=255)

                                 ccttatccgacctacgattcggggccgtttgtagGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAgg                                                                    >  2:1640289‑M1/35‑100 (MQ=255)

                                 ccTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAgg                                                                    <  2:1996178/100‑1 (MQ=255)

                                  cTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGc                                                                   >  1:1887985/1‑100 (MQ=255)

                                   tGGACGGATAAAGCGTTTACGCGACAACGGATGCCAGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAgg                                                                    <  1:1915878/98‑1 (MQ=255)

                                    ggACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGt                                                                 <  1:1834267/100‑1 (MQ=255)

                                        cgacctacgattcggggccgtttgtaggcccgataagacgcgccagcgtcgcatcgggcATACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAc                                                             >  2:3751210‑M2/60‑100 (MQ=255)

                                         gATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAcg                                                            <  1:34143/100‑1 (MQ=255)

                                           tAAAGCGTTTACGCGACAACGGATGCCCGGTGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAcgcc                                                          <  2:3329816/100‑1 (MQ=255)

                                           tAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAcgcc                                                          >  2:1028261/1‑100 (MQ=255)

                                                cGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATc                                                     <  2:2846437/100‑1 (MQ=255)

                                                 gTTTACGCGACAACGGATGCCCGGTGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATc                                                     <  1:4127318/99‑1 (MQ=255)

                                                 gTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATcc                                                    <  1:3333845/100‑1 (MQ=255)

                                                 gTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATcc                                                    <  2:1471096/100‑1 (MQ=255)

                                                  tttACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCg                                                   >  1:4049381/1‑100 (MQ=255)

                                                    tACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAc                                                 <  2:338794/100‑1 (MQ=255)

                                                    tACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAc                                                 <  1:3597904/100‑1 (MQ=255)

                                                     aCGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATGCGGCGTGAACGCCTTATCCGAcc                                                <  2:724093/100‑2 (MQ=25)

                                                     aCGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATGCGGCGTGAACGCCTTATCCGAcc                                                <  2:506892/100‑2 (MQ=25)

                                                     aCGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                <  1:425199/100‑1 (MQ=255)

                                                     aCGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                <  2:3955220/100‑1 (MQ=255)

                                                       gcgACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaaa                                              <  1:898869/100‑1 (MQ=255)

                                                        cgACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAc                                             >  1:3467210/1‑100 (MQ=255)

                                                        cgACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAc                                             <  1:3063813/100‑1 (MQ=255)

                                                         gACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAcc                                            >  1:1367336/1‑100 (MQ=255)

                                                           cAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCAt                                          >  1:2618201/1‑100 (MQ=255)

                                                            aaCGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATg                                         >  2:3112209/1‑100 (MQ=255)

                                                             aCGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCAt                                          <  1:3535451/98‑1 (MQ=255)

                                                             aCGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGc                                        >  2:1129899/1‑100 (MQ=255)

                                                             aCGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATAGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGc                                        >  2:2652867/1‑100 (MQ=255)

                                                             aCGGATGCCCGATGAGACGCTGGGGGGTCTTATCGGGCCTACAAGCGGCCCCGAATCGTAGGTGGGATGCGGCGTGAACGCCTTATCCGAcct                                               <  2:1522264/93‑3 (MQ=16)

                                                              cGGCTGCCCGACGCGTCTCTGGCGCGTCTGAGCGGGCCTACAACCGGCCCCGAATCGTAGGTCGGTTAAGGCGTTCTCGCCGCATCAGACAAAcc                                            <  2:1558248/95‑1 (MQ=255)

                                                               ggATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTg                                      <  1:2375763/100‑1 (MQ=255)

                                                                taggcccgataagacgcgccagcgtcgcatcgggcCTACAAACGGCCCCGAATCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTgg                                     >  1:199478‑M2/36‑100 (MQ=255)

                                                                 aggcccgataagacgcgccagcgtcgcatcgggcCTACAAACGGCCCCGAATCGTAGGGCGGATAAGGAGTTCACGCCGCATCCGACAAACCATGCTGGa                                    >  2:2124033‑M2/35‑100 (MQ=255)

                                                                  tGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGAt                                   >  1:63730/1‑100 (MQ=255)

                                                                  ggcccgataagacgcgccagcgtcgcatcgggcCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGAt                                   >  1:968253‑M2/34‑100 (MQ=255)

                                                                   gcccgataagacgcgccagcgtcgcatcgggcCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATc                                  >  1:932505‑M2/33‑100 (MQ=255)

                                                                    CCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAAACCATGCTGGATca                                 <  1:1420904‑M1/100‑1 (MQ=255)

                                                                    CCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATgctggctc                                  <  1:51902‑M1/99‑4 (MQ=255)

                                                                    CCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATca                                 >  2:529834‑M1/1‑100 (MQ=255)

                                                                     ccgataagacgcgccagcgtcgcatcgggcCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcac                                >  2:2363098‑M2/31‑100 (MQ=255)

                                                                     CCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcac                                >  1:311335‑M1/1‑100 (MQ=255)

                                                                     CCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcac                                >  1:3624466‑M1/1‑100 (MQ=255)

                                                                     CCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcac                                >  1:2721223‑M1/1‑100 (MQ=255)

                                                                      CGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcaca                               >  2:1653631‑M1/1‑100 (MQ=255)

                                                                      CGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcaca                               >  1:4063906‑M1/1‑100 (MQ=255)

                                                                      CGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcaca                               >  1:777771‑M1/1‑100 (MQ=255)

                                                                      CGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGCCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATcaca                               <  2:2544042‑M1/100‑1 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTc                          >  1:1551150/1‑100 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTc                          <  1:546894/100‑1 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTc                          <  1:1727768/100‑1 (MQ=255)

                                                                            gACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCg                         <  1:3853545/100‑1 (MQ=255)

                                                                            gACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCg                         <  2:196567/100‑1 (MQ=255)

                                                                             aCGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGc                        >  2:2376108/1‑100 (MQ=255)

                                                                              cGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCa                       <  1:1058299/100‑1 (MQ=255)

                                                                              cGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCa                       >  1:1978759/1‑100 (MQ=255)

                                                                              cGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCa                       >  1:2500510/1‑100 (MQ=255)

                                                                               gCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCaa                      <  2:2163674/100‑1 (MQ=255)

                                                                               gCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCaa                      <  2:3022344/100‑1 (MQ=255)

                                                                                cTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCaaa                     <  2:1347078/100‑1 (MQ=255)

                                                                                   gcgcGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAacac                  <  1:682511/100‑1 (MQ=255)

                                                                                   gcgcGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAacac                  >  2:688164/1‑100 (MQ=255)

                                                                                       gTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGa              >  1:1148603/1‑100 (MQ=255)

                                                                                        tCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGAc             <  2:207122/100‑1 (MQ=255)

                                                                                         cTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTTGATCACAACTTCGCAAACACCCGACg            <  2:3596733/100‑1 (MQ=255)

                                                                                           tATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTg          >  2:140629/1‑100 (MQ=255)

                                                                                             tcgggcCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTgca        <  2:129519‑M2/94‑1 (MQ=255)

                                                                                              cgggcCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTgcag       <  1:2578245‑M2/95‑1 (MQ=255)

                                                                                              cgggcCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTgcag       >  2:1237540‑M2/6‑100 (MQ=255)

                                                                                                ggcCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTgcagca     <  2:1495753‑M2/97‑1 (MQ=255)

                                                                                                  cCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACACGACGTGCAGCATc   >  2:3838259‑M2/2‑100 (MQ=255)

                                                                                                   cTAAAATCGGCCCCGAATCCTAGGTCGGATAAAGCGTTCAGGCCGCATTCGACAAAGCATGCTGGATCACAACTTCGCAAACACCCGACGTgcagc      <  2:60563/96‑1 (MQ=255)

GCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCG  >  NC_000913/173437‑173635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.