New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 601044123 (0.830)23 (0.170) 11/160 NT 17.0% coding (2331/3144 nt) cusA copper/silver efflux system, membrane component
?NC_000913 = 601061 114 (0.860)coding (2348/3144 nt) cusA copper/silver efflux system, membrane component

Only 100 of 164 total aligned reads displayed.

TGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCG  >  NC_000913/600965‑601159
                                                                                                |                                                                                                  
  ggcggggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgcc                                                                                               >  1:744208‑M2/1‑95 (MQ=255)
  ggcggggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgcc                                                                                               <  1:1300366‑M2/100‑6 (MQ=255)
    cggggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccag                                                                                             <  1:3751299‑M2/100‑8 (MQ=255)
    cggggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccag                                                                                             >  1:574471‑M2/1‑93 (MQ=255)
     ggggcgATGGTTGGCGAAACGGTGGAAGGAATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagc                                                                                            >  2:3237762‑M2/1‑92 (MQ=255)
      gggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATACAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagct                                                                                           >  1:3101381‑M2/1‑91 (MQ=255)
       ggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTg                                                                                          <  2:3978838/100‑1 (MQ=255)
       ggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTg                                                                                          <  2:2370166/100‑1 (MQ=255)
       ggcgATGGCTGGCGAAACGGAGGAAGGGGTTGCCCGTTATTCAATTAATCTGCGTTATCCGCAAAGCGGGAGCGATAGTCCGCAGGGACTGCGCCAGCTg                                                                                          <  2:2819545/100‑1 (MQ=255)
        gcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGc                                                                                         <  1:3621790/100‑1 (MQ=255)
        gcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGc                                                                                         >  2:648128/1‑100 (MQ=255)
         cgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGcc                                                                                        >  2:3674290/1‑100 (MQ=255)
            tGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGAt                                                                                     >  2:1677822/1‑100 (MQ=255)
             ggTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATc                                                                                    >  1:2141044/1‑100 (MQ=255)
               ttGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCt                                                                                  <  1:1427941/100‑1 (MQ=255)
               ttGGCGAAACGGTGGAAGGGATTGCCCGTTATCAAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCt                                                                                  <  2:2975630/100‑1 (MQ=255)
                tGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTg                                                                                 <  1:3968103/100‑1 (MQ=255)
                tGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTg                                                                                 <  1:1955099/100‑1 (MQ=255)
                 ggCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGa                                                                                >  1:3937557/1‑100 (MQ=255)
                 ggCGAAACGGTGGAAGGGATTGACCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGa                                                                                >  2:1183594/1‑100 (MQ=255)
                    gAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGc                                                                             >  1:2481658/1‑100 (MQ=255)
                    gAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGc                                                                             <  1:907109/100‑1 (MQ=255)
                     aaaCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGcc                                                                            <  1:3103230/100‑1 (MQ=255)
                       aCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGa                                                                          >  1:3031225/1‑100 (MQ=255)
                         ggTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATg                                                                        <  1:1237867/100‑1 (MQ=255)
                          gTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGa                                                                       >  2:2034843/1‑100 (MQ=255)
                            ggAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAag                                                                     >  2:102523/1‑100 (MQ=255)
                            ggAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAag                                                                     >  2:1734452/1‑100 (MQ=255)
                            ggAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAag                                                                     >  2:1734747/1‑100 (MQ=255)
                             gAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagc                                                                    <  1:2974790/100‑1 (MQ=255)
                             gAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagc                                                                    <  1:3257586/100‑1 (MQ=255)
                             gAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagc                                                                    >  2:1766624/1‑100 (MQ=255)
                             gAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagc                                                                    <  2:2364837/100‑1 (MQ=255)
                              aaGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagca                                                                   >  1:1052944/1‑100 (MQ=255)
                                gggATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagcagc                                                                 <  1:1525472/100‑1 (MQ=255)
                                gggATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagcagc                                                                 <  1:339521/100‑1 (MQ=255)
                                 ggATTGCCCGTTATGCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGTCACTGCGCCCGCTGCCGATCCTGACGCCGATGAAgcagca                                                                >  2:2801510/1‑100 (MQ=255)
                                   aTTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCaaa                                                              <  2:1326864/100‑1 (MQ=255)
                                    ttGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAAt                                                             <  1:3914406/100‑1 (MQ=255)
                                    ttGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAAt                                                             <  1:2006283/100‑1 (MQ=255)
                                      gcgcGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCa                                                           <  2:749607/97‑1 (MQ=255)
                                      gCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATGCTGACGCCGATGAAACAGCAAATCa                                                           >  2:2025293/1‑100 (MQ=255)
                                      gCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCa                                                           >  2:2690963/1‑100 (MQ=255)
                                      gCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCa                                                           >  1:591174/1‑100 (MQ=255)
                                      gCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCa                                                           <  1:4105811/100‑1 (MQ=255)
                                      gCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTACCGATCCTGACGCCGATGAAGCAGCaaa                                                              >  2:3533577/1‑97 (MQ=255)
                                      gCCCGGTATGCAATTAAGCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGGAGGCACTGCGCCAGCTGCCGATCCTGACGCCGGTGAAGCAGCAAAt                                                             <  2:315324/98‑1 (MQ=255)
                                       cccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCAc                                                          >  2:3139251/1‑100 (MQ=255)
                                       cccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCAc                                                          >  1:255569/1‑100 (MQ=255)
                                           ttATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTg                                                      >  1:1767221/1‑100 (MQ=255)
                                              tCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGc                                                    >  2:2265387/1‑99 (MQ=255)
                                                cAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGa                                                 >  1:2849070/1‑100 (MQ=255)
                                                cAATTAATCTGCGTTATCCGCAAAGCTGGCGAGATAGTACGCAGGCACTGCGCCAGCTGCCGATCCTGAAGCCGATGAAACAGCAAATCACAATGGCAGa                                                 >  2:396835/1‑100 (MQ=255)
                                                      aTCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGc                                           >  2:1930675/1‑100 (MQ=255)
                                                       tCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGcc                                          >  2:2618550/1‑100 (MQ=255)
                                                        cTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCg                                         >  1:2205235/1‑100 (MQ=255)
                                                          gCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGAc                                       <  1:3352500/100‑1 (MQ=255)
                                                          gCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAAGCACCCTGGCAGACGTGGCCGAc                                       <  1:1153579/100‑1 (MQ=255)
                                                           cGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAACCACCCTGGCAGACGTGGCCGAc                                       >  2:346796/1‑99 (MQ=255)
                                                            gTTATCCGCAAAGGTGGCGCGATAGGCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACAt                                     <  2:3398425/100‑1 (MQ=255)
                                                            gTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACAt                                     >  2:381564/1‑100 (MQ=255)
                                                              tATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACAtt                                    >  1:973772/1‑99 (MQ=255)
                                                                 ccGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaatttgataacgggcaatcccttccaccgtttcgccaacca                                <  2:3064850‑M2/100‑69 (MQ=255)
                                                                 ccGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAg                                <  2:833716/100‑1 (MQ=255)
                                                                 ccGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAg                                <  1:2432006/100‑1 (MQ=255)
                                                                 ccGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAg                                >  1:104163/1‑100 (MQ=255)
                                                                  cGCACAGCTGACGCGATAGCCCGCAGGCACTgcgccagctttgcggataacgcagattaactggataacgggccatcccttccaccctttcgccaacc                                 <  2:2148426‑M2/98‑68 (MQ=255)
                                                                  cGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaacca                                <  2:2911854‑M2/99‑69 (MQ=255)
                                                                  cGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAg                                >  2:991868/1‑99 (MQ=255)
                                                                  cGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGt                               <  2:1085184/100‑1 (MQ=255)
                                                                   gCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatc                              <  1:16171‑M2/100‑71 (MQ=255)
                                                                   gCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatc                              <  1:316421‑M2/100‑71 (MQ=255)
                                                                   gCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatc                              <  1:639952‑M2/100‑71 (MQ=255)
                                                                    cAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGtct                             <  1:2673185/100‑1 (MQ=255)
                                                                     aaaGCTGGCGCGATAGTCCGCAGGCACTgcgccggctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgc                            <  2:422211‑M2/100‑73 (MQ=255)
                                                                     aaaGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGtctc                            <  1:648134/100‑1 (MQ=255)
                                                                     aaaGCGGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGtct                             <  2:2562762/99‑1 (MQ=255)
                                                                      aaGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTctct                           <  1:375898/100‑1 (MQ=255)
                                                                       ngCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCAGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTa                          >  2:2214099/2‑100 (MQ=255)
                                                                       aGCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccc                          <  1:1763109‑M2/100‑75 (MQ=255)
                                                                        gCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgcccc                         <  1:565135‑M2/100‑76 (MQ=255)
                                                                        gCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgcccc                         <  1:3509133‑M2/100‑76 (MQ=255)
                                                                        gCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgcccc                         <  2:1873412‑M2/100‑76 (MQ=255)
                                                                        gCTGGCGCGATAGTCCGCAGGCACTgcaccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgcccc                         <  2:27951‑M2/100‑76 (MQ=255)
                                                                         ccggcgCGATAGTACGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccg                        <  1:2804960‑M2/98‑77 (MQ=255)
                                                                         cTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccg                        <  2:1400064‑M2/100‑77 (MQ=255)
                                                                         cTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgcccc                         <  2:3641851‑M2/99‑76 (MQ=255)
                                                                         cTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTAcc                        <  2:380762/100‑1 (MQ=255)
                                                                           ggCGCGATAGTCCGCATGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCgg                      <  2:1499089/100‑1 (MQ=255)
                                                                           ggCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCgg                      >  2:2303426/1‑100 (MQ=255)
                                                                            gcgcGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGa                     >  1:2319618/1‑100 (MQ=255)
                                                                             cgcgATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGTCTATGAAGCAGCAAATCACCCTGGAAGACGTGGCCGACATTAAAGTCTCTACCGGAc                    <  1:1384572/100‑1 (MQ=255)
                                                                                 aTAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTc                <  2:865059/100‑1 (MQ=255)
                                                                                 aTAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTc                <  1:4052387/100‑1 (MQ=255)
                                                                                    gTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAGGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGAt             <  2:504280/100‑1 (MQ=255)
                                                                                      ccGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGc           <  2:656624/100‑1 (MQ=255)
                                                                                      ccGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGc           >  2:1112505/1‑100 (MQ=255)
                                                                                       cGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCt          <  1:3799306/100‑1 (MQ=255)
                                                                                             cACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTATCTACCGGACCGTCGATGCTGAAAAc    >  2:1222536/1‑100 (MQ=255)
                                                                                               cTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCg  >  1:2975959/1‑100 (MQ=255)
                                                                                                |                                                                                                  
TGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCG  >  NC_000913/600965‑601159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.