New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 900799NA (NA)5 (0.040) 5/164 NT NA noncoding (51/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 900831 NA (NA)noncoding (83/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 192 total aligned reads displayed.

AAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGC  >  NC_000913/900732‑900930
                                                                                                   |                                                                                                    
 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGAGCGTCTTATCAGAC                                                                                                      <  1:4069749‑M2/99‑1 (MQ=255)
  gAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCt                                                                                                    <  2:3859531/100‑1 (MQ=255)
    aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTAc                                                                                                  <  2:2289763/100‑1 (MQ=255)
     tttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACa                                                                                                 <  1:820071/100‑1 (MQ=255)
     tttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACa                                                                                                 <  1:348972/100‑1 (MQ=255)
       tctGCACTATCTAGGCCGGATATGCCGTCCCCTCCGCATCCGGCACCGGCACCGTGCTGATGTCTGATGCGACTCCGGCGCGTCTCATCAGACCTACa                                                                                                 >  2:544294/3‑98 (MQ=255)
         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                                                                            <  2:1442248/100‑1 (MQ=255)
         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                                                                            <  1:2168106/100‑1 (MQ=255)
         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                                                                            >  1:571371/1‑100 (MQ=255)
          gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc                                                                                           <  1:1731696/100‑1 (MQ=255)
           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                                                                          >  2:429732/1‑100 (MQ=255)
           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                                                                          >  2:979475/1‑100 (MQ=255)
           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                                                                          >  1:3798016/1‑100 (MQ=255)
            aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACAGCCCTGATGTCTGATGCGACACCGGCGCGTATCATCACACCTACACAAacc                                                                                          >  2:3262102/1‑99 (MQ=25)
             cTATGTAGGCCGGATAAGGCATCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccccc                                                                                        >  1:1157109/1‑100 (MQ=255)
               aTGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCg                                                                                      >  1:480527/1‑100 (MQ=255)
               aTGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCg                                                                                      >  1:3168724/1‑100 (MQ=255)
                 gTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACTCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGc                                                                                    <  1:2911488/100‑1 (MQ=255)
                   aGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGa                                                                                  >  1:312533/1‑100 (MQ=255)
                    ggCCGTATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                                                                 >  2:1323550/1‑100 (MQ=255)
                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                                                                 >  1:1008406/1‑100 (MQ=255)
                     gCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAt                                                                                >  1:1014911/1‑100 (MQ=255)
                      ccGGATAAGGCGTCCCCGCCGCATCCGGCACGGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                                                                               <  1:199622/100‑1 (MQ=255)
                         gATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTAc                                                                            <  1:1920055/100‑1 (MQ=255)
                         gATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTAc                                                                            <  1:2413722/100‑1 (MQ=255)
                            aaGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCa                                                                         <  1:296703/100‑1 (MQ=255)
                            aaGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCa                                                                         <  1:3173642/100‑1 (MQ=255)
                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                                                                        <  1:1159686/100‑1 (MQ=255)
                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                                                                        <  2:1749755/100‑1 (MQ=255)
                              ggCGTCCCCGCCACATCCGGCACACGCACCGTGCTGATGTCTGATACGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                                                                        >  2:2059725/1‑99 (MQ=255)
                                cGTCCCCGCCGCCTCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGCCTTATCAGACCTACAAACCCCCCAGGCGAATGTACGCAGCca                                                                     >  2:851394/1‑100 (MQ=38)
                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                                                                     <  1:4123110/100‑1 (MQ=255)
                                  tCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCcaca                                                                   >  1:589198/1‑100 (MQ=255)
                                   ccccGCCGCATCCGGCACAGGCACCGTGCTGATATCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCCGGCGAATGTACGCAGCcaca                                                                   >  2:2731062/1‑100 (MQ=255)
                                   ccccGCCGCATCCGGCACAGGCACCGAGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                                                                  >  1:2518052/1‑100 (MQ=255)
                                    cccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAtt                                                                 <  1:3674450/100‑1 (MQ=255)
                                    cccGCCGCATCCGGCACAGGCACCGTGCTAATGTCTCATCCGACGCTCGCGCGTCTTATCAGACCTCCAAAACCCCCCGGCGAATCTACGCCGCcac                                                                    >  2:3623478/1‑97 (MQ=37)
                                     ccgccgCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTa                                                                <  2:2922451/100‑1 (MQ=255)
                                        ccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACCTTAAtt                                                             >  1:3684397/1‑100 (MQ=255)
                                              cctgCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTTCTCAGCCACATTAATTTCGCCg                                                       <  2:1366326/97‑1 (MQ=255)
                                              ccGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg                                                       <  2:1657602/100‑1 (MQ=255)
                                                ggCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGtt                                                     >  1:2760603/1‑100 (MQ=255)
                                                ggCACAGGCACCGTGCTGATGTCTCATGCGACGCTTGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                                                          <  2:2690356/95‑1 (MQ=255)
                                                 gCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTc                                                    <  1:1066727/100‑1 (MQ=255)
                                                   acaGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGa                                                  >  2:273420/1‑100 (MQ=255)
                                                   acaGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGa                                                  >  1:3042814/1‑100 (MQ=255)
                                                    caGGCACGGTGATGATGTCTGATGCGACGCCGGCGCGTCTTTTCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAGTTTCGCCGTTCGaa                                                 >  2:3082652/1‑100 (MQ=255)
                                                     aGGCAGCGTGCTGATGTCTGATGCGCCGCTGGCGGGTCTTATCAGACCTACAAGACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAAt                                                <  2:1667222/100‑1 (MQ=38)
                                                     aGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAAt                                                <  2:3459024/100‑1 (MQ=255)
                                                      ggCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATg                                               <  2:3516919/100‑1 (MQ=255)
                                                        cACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGcc                                             >  1:3208712/1‑100 (MQ=255)
                                                           cGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAgc                                          <  2:714977/100‑1 (MQ=255)
                                                            gTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAgcg                                         >  1:1664206/1‑100 (MQ=255)
                                                                tGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCttt                                     >  1:2585450/1‑100 (MQ=255)
                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaatt                                     <  1:627607‑M2/100‑66 (MQ=255)
                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACACCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTg                                    <  1:2127788/100‑1 (MQ=255)
                                                                  aTGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgc                                   <  2:357984/100‑1 (MQ=255)
                                                                    gTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAACCCCCCCGGCGAATGTACGCAGCTACATTAATTTCGCCGTTCGAATGCCAGTGCTTTgc                                   <  2:278582/98‑1 (MQ=255)
                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              >  2:1121624/1‑100 (MQ=255)
                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              <  2:4093177/100‑1 (MQ=255)
                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              >  2:275139/1‑100 (MQ=255)
                                                                        gATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGa                             >  2:1485875/1‑100 (MQ=255)
                                                                         aTGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGAt                            >  2:3051329/1‑100 (MQ=255)
                                                                         aTGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGAt                            <  2:2469158/100‑1 (MQ=255)
                                                                          tGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATc                           <  1:1323558/100‑1 (MQ=255)
                                                                          tGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATc                           <  1:2975081/100‑1 (MQ=255)
                                                                          cgCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATc                           <  1:2834393/99‑1 (MQ=255)
                                                                           gCGACGCTGGCGCTTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCa                          <  1:342437/100‑1 (MQ=255)
                                                                           gCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCa                          >  1:702985/1‑100 (MQ=255)
                                                                           gCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCa                          <  1:1528529/100‑1 (MQ=255)
                                                                            cGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAg                         >  1:2246165/1‑100 (MQ=255)
                                                                             gACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGa                        >  2:3246895/1‑100 (MQ=255)
                                                                             gACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGa                        <  2:2964010/100‑1 (MQ=255)
                                                                              aCGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGAc                       <  2:2585434/100‑1 (MQ=255)
                                                                                  tGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcat                   <  2:3161784/100‑1 (MQ=255)
                                                                                    gcgcGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggaca                  >  2:213715‑M2/1‑16 (MQ=255)
                                                                                    gcgcGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcatca                 <  2:1014905/100‑1 (MQ=255)
                                                                                    gcgcGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcatca                 <  2:234182/100‑1 (MQ=255)
                                                                                       cgTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCAtcatca              <  1:3931946/100‑1 (MQ=255)
                                                                                        gTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAg             >  1:3519956/1‑100 (MQ=255)
                                                                                         tCTTATCAGACCTACAAAACCCCCCGACGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGc            >  1:43717/1‑100 (MQ=255)
                                                                                          cTTATCAGACCTACAAAGCCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCg           <  1:3704125/100‑1 (MQ=255)
                                                                                          cTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGc            >  2:1682041/1‑99 (MQ=255)
                                                                                          cTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCg           <  2:1286000/100‑1 (MQ=255)
                                                                                           ttATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCg           <  1:209981/99‑1 (MQ=255)
                                                                                            tATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTc         >  1:3377883/1‑100 (MQ=255)
                                                                                            tATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTc         <  2:3996832/100‑1 (MQ=255)
                                                                                            tATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTc         <  2:40680/100‑1 (MQ=255)
                                                                                               cAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagt       >  1:4008706‑M2/1‑5 (MQ=255)
                                                                                               cAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagt       >  2:348969‑M2/1‑5 (MQ=255)
                                                                                               cAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagt       >  2:2097039‑M2/1‑5 (MQ=255)
                                                                                               cAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagc      <  2:3732293/100‑1 (MQ=255)
                                                                                               cAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagc      <  1:4695/100‑1 (MQ=255)
                                                                                               cAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagc      >  1:970030/1‑100 (MQ=255)
                                                                                               cAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagc      <  1:1291619/100‑1 (MQ=255)
                                                                                                aGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagtt      <  1:1186570‑M2/100‑97 (MQ=255)
                                                                                                aGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagca     >  1:1720910/1‑100 (MQ=255)
                                                                                                 gACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagttg     <  2:1927552‑M2/100‑98 (MQ=255)
                                                                                                 gACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagttg     <  1:1576584‑M2/100‑98 (MQ=255)
                                                                                                   ccTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGc  >  2:2088577/1‑100 (MQ=255)
                                                                                                   |                                                                                                    
AAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGC  >  NC_000913/900732‑900930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.