BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1097029 =	232 (0.560)	34 (0.080) +C	12/324	15.1	14.3%	intergenic (+200/+536)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
*	?	NC_000913	= 1097570	179 (0.430)	34 (0.080) +C	12/324	15.1	14.3%	noncoding (83/88 nt)	serX	tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 233 total aligned reads displayed.

GGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTC  >  NC_000913/1096787‑1097270

ggCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTGTGTACGCTCTTGCGCATTTTGATTGTTGCCTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCGCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                                                                                                                                                                                                         <  1:2766298/249‑1 (MQ=255)

    tgtgACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggggg                                                                                                                                                                                                                                                       >  2:5954432/1‑247 (MQ=255)

            gTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAATTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGAAACCAGACAGTTGATGGGCACGATTTGCCCTCGCCCTAACAGACGCGGGCGGGGGCACCCGGCGTGTGCAATATACGAAAAAAAAGCCAGTACTTTGGTAGGAGGTCTTCTTTAAATATGACGGCGAGGGGGGGagtcggctggta                                                                                                                                                                                                                                           >  2:2633809/1‑240 (MQ=38)

            gTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggggggggtggcatgat                                                                                                                                                                                                                                            >  2:733469/1‑239 (MQ=255)

                  ccGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCggggggggggggggggggctgtgttctttt                                                                                                                                                                                                                                     >  2:4815950/1‑233 (MQ=255)

                  ccGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACt                                                                                                                                                                                                                                               <  1:4816782/240‑1 (MQ=255)

                                            gAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAggggggg                                                                                                                                                                                                                                                       >  2:1283041/1‑207 (MQ=255)

                                                 gATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgg                                                                                                                                                                                                                                                            >  1:1653576/1‑197 (MQ=255)

                                                 gATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgg                                                                                                                                                                                                                                                            <  2:1653272/197‑1 (MQ=255)

                                                                gATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt                                                                                                                                                                                                                                                     <  1:1320831/189‑1 (MQ=255)

                                                                gATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACt                                                                                                                                                                                                                                               <  2:3874490/194‑1 (MQ=255)

                                                                    ataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑TGGTCGCCTCGCTCC‑CCCCCCCGGCGGccccccc                                                                                                                                                                                                                >  2:5465549/1‑216 (MQ=37)

                                                                    ataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTc                                                                                                                                                                                                                <  1:5466469/220‑1 (MQ=255)

                                                                       cATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACt                                                                                                                                                                                                                                               <  1:3082446/187‑1 (MQ=255)

                                                                       cATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGTT‑ggat                                                                                                                                                                                                                                               >  2:4135462/1‑184 (MQ=255)

                                                                         tatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgg                                                                                                                                                                                                                                                            <  1:177085/173‑1 (MQ=255)

                                                                         tatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTg                                                                                                                                                                                     <  2:503954/240‑1 (MQ=255)

                                                                            atGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCATTATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTg                                                                                                                                                                      <  1:4007952/251‑1 (MQ=255)

                                                                              gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACtcgctt                                                                                                                                                                                                                                          <  2:4394579/185‑1 (MQ=255)

                                                                              gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCg                                                                                                                                                                                                                            <  2:5867404/198‑1 (MQ=255)

                                                                              gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGcc                                                                                                                                                                                                                     <  1:2573216/205‑1 (MQ=255)

                                                                              gTTCTGTACTCTCTGGCGCATTTTGATTGTTGACGGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgg                                                                                                                                                                                                                                                            <  2:1756990/168‑1 (MQ=255)

                                                                                tCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCgg                                                                                                                                                                                                                           <  2:219371/197‑1 (MQ=255)

                                                                                tCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGTT‑GGCTCGCTTTGCTCG‑CCCCGCgg                                                                                                                                                                                                                           >  1:219420/1‑197 (MQ=255)

                                                                                 cTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAAT‑GACTCGAGTCCCTCG‑CCCCGCGCGGAGGCCGCCCACTGC‑GTTCACAGGCTGG‑CCAAACGGCGGGCG‑CCAGgtg‑ttgg                                                                                                                                                                 >  1:1139131/1‑247 (MQ=21)

                                                                                                cATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑cc                                                                                                                                                                                          <  2:5820989/212‑1 (MQ=255)

                                                                                                  ttttGATTGTTG‑CTTGGTAACCCGGCCGTTGATGGGCAAGATTTCCCCCCCGCCTAACCGACGGGGGGGGGGGCCCCCGGGGGGTGGAAAATACGAAAAAAAAGGCCGTACCTTCCATCGGGCCTTTTTTTAAAAATGGGGGGGGGGGGGGGGTTGGACCCG‑TTCCCCTG‑GCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑tctc                                                                                                                                            <  1:4114647/251‑1 (MQ=9)

                                                                                                       aTTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGGT‑GAAGCGCCTTGCTCC‑CCCCGCGGGCGGGCCGCCCACcgc‑g                                                                                                                                                                                                         >  1:4897918/1‑191 (MQ=21)

                                                                                                               cTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGt                                                                                                                                                                        <  1:5136644/214‑1 (MQ=255)

                                                                                                                 gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGc                                                                                                                                                                                                                         <  2:4411838/166‑1 (MQ=255)

                                                                                                                   gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTggc                                                                                                                                                                                                                                                             >  2:2012376/1‑128 (MQ=255)

                                                                                                                   gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GGGACGCTTCGCCCC‑CCCTCCGGGGCGCCCCCCCACTg                                                                                                                                                                                                            >  1:102437/1‑177 (MQ=21)

                                                                                                                       ccAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggggggggtggct                                                                                                                                                                                                                                                >  2:1706798/1‑132 (MQ=255)

                                                                                                                       ccAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACt                                                                                                                                                                                                                                               <  1:1707103/139‑1 (MQ=255)

                                                                                                                          gACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                                                                                                                                                                                                         <  2:4675341/127‑1 (MQ=255)

                                                                                                                            cAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTT‑GAATCGCTTCCCTCG‑CCCCCCGGGGCGCCCCCCCCCTGCGGTTCCCGGT‑TGT‑CCAACCCGGTGGCG‑CCCCGTG‑TCGAGCCCCCCGCGGGG‑GG‑TCTCCT‑cccccccccgccctttttcacc                                                                                                                   >  2:3303366/1‑234 (MQ=12)

                                                                                                                            cAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTc                                                                                                                                                                                                <  2:4196496/179‑1 (MQ=255)

                                                                                                                            cAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑c                                                                                                                                                                                           <  2:3502329/183‑1 (MQ=255)

                                                                                                                              gTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GACCCCCTTCCGCCC‑CCCCGCGGGCAGCCCCCCCACCCCGGTCCTCGGCCTG‑‑CCAACCGGCCGGTG‑CCACGTG‑TTGCCCCCCCGGCGGGGCCT‑TCCCAC‑CCCCCCgcgggtgg                                                                                                                           >  1:3017883/1‑234 (MQ=12)

                                                                                                                              gTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑Gc                                                                                                                         <  2:3017389/241‑1 (MQ=255)

                                                                                                                              gTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCAGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTGACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑GT‑TCTCAT‑CCCCCCGGCGTGG‑GCAATACACgca                                                                                                               >  2:3540526/1‑249 (MQ=255)

                                                                                                                                           aTTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GACTCCCCTCGCCCC‑CCCCGCGGGGGGCCCCCCCCCCCC‑GTTTCCCGGCTGT‑CCACCTGGCGGGTG‑GCCGTTG‑GTGGCCCCCCGCCGGGG‑GG‑TTTCCT‑cccccccccggggggc                                                                                                                         >  2:1465770/1‑219 (MQ=12)

                                                                                                                                           aTTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCa                                                                                                                        <  2:4155620/229‑1 (MQ=255)

                                                                                                                                           aTTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGGT‑GACTCGCCTCGCTCC‑CCCCGCGGGGCGCCCCCCCCCTGC‑GTTCACCGGCTGT‑CCCAACGGGTGGCG‑CCAGGTT‑TCGACCCCCCGTCGGGG‑GG‑TTTCCT‑CCCCCCCGTGTGG‑GCa                                                                                                                        >  1:4156326/1‑229 (MQ=17)

                                                                                                                                               ccccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GAATCGCTTCCCCCGCCCCTCCGGGC‑GCCCGCTccc                                                                                                                                                                                                              >  2:861807/1‑145 (MQ=17)

                                                                                                                                                    cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GACTCGCTTCCCTCG‑CCCCTCGGGCAGCCCCCCCCCTGCGGTTACCGGCCTG‑‑CCCACCGGCCGGCG‑GCCGTTGTTGGACCCCCCGTCGGGG‑GT‑T‑TCATCCCCCCCGGGGGGG‑GCAA‑ACACGaaaaaaaaaaaccgactttcgtc                                                                                          >  1:4869609/1‑235 (MQ=9)

                                                                                                                                                    cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTg                                                                                                                                                                      <  1:3105049/179‑1 (MQ=255)

                                                                                                                                                      cccTAACAGACGTGGGCGGGGGCCCCCGGTGTGGTCAATATACGAAAAAAAAGCCCGTTCTTTCGTACGAGCTCTTCCTTAAATATGGCGGGGAGGGGGGGATT‑GACCCGCCTTGCTCG‑CCCTGCGGGCAGCCCGCCCACTGC‑GGTCACGGTCCGG‑CCAACTGGCCTTCG‑CCAGGTT‑TCGGCCCCCGGTCGGGG‑CT‑TCCCAT‑CCCCCCGGTGTGT‑GCAATac                                                                                                                    <  2:1515368/222‑1 (MQ=14)

                                                                                                                                                      cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑tctc                                                                                                                                            <  1:3729530/200‑1 (MQ=255)

                                                                                                                                                      cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑cccccc                                                                                                                                   <  2:145035/208‑1 (MQ=255)

                                                                                                                                                      cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCgg                                                                                                                                 <  2:4001211/210‑1 (MQ=255)

                                                                                                                                                      cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGGT‑GACTCGCCTCCCTCG‑CCCCGCggggcggccgccccc                                                                                                                                                                                                              >  1:3333816/1‑128 (MQ=17)

                                                                                                                                                      cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATAGGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑Gc                                                                                                                         <  2:3005686/217‑1 (MQ=255)

                                                                                                                                                        cTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GACTCCCTTCTCTCT‑CCCTCCCGGAGGACCCCGCCCTGC‑GCTCACGGTGTGT‑GTCACTTGGTGTCG‑CCCCTTT‑TCGACAACCCCCCGGGG‑GG‑TCTCCA‑CCCCCCGCGGTGG‑GGAATACACCacaaaaaaaaccagagattt                                                                                             >  2:642027/1‑231 (MQ=9)

                                                                                                                                                         tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATac                                                                                                                    <  2:1323510/219‑1 (MQ=255)

                                                                                                                                                         tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GAATCGCTTCGCTCG‑CCCCGCGGGGAGCCCGCCCCCTGC‑GGTCACGGGCTGG‑CCCACTg                                                                                                                                                                                     >  1:3893300/1‑160 (MQ=14)

                                                                                                                                                              gACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGGT‑GAATCGCTTCGCTCC‑CCCtcccgg                                                                                                                                                                                                                          >  2:4982591/1‑115 (MQ=14)

                                                                                                                                                              gACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggggggg                                                                                                                                                                                                                                                     >  1:440306/1‑93 (MQ=255)

                                                                                                                                                              gACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTT‑GACTCGCTTCGCTCG‑CCCTGCGGGCGGCCCCCCCCCCGC‑GGTTACGGGCTGT‑c                                                                                                                                                                                           >  1:4413495/1‑149 (MQ=14)

                                                                                                                                                              gACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTg                                                                                                                                                                                                            <  2:5258229/134‑1 (MQ=255)

                                                                                                                                                              gACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGAT‑GAATCCCTTTGCTCG‑CCCCGCGGGGGGGCCCCCCACCGC‑GTGCGCGGGCGGT‑CCacaac                                                                                                                                                                                     >  1:2209296/1‑151 (MQ=14)

                                                                                                                                                                    ggCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTg                                                                                                                                                                                     <  1:3118669/149‑1 (MQ=37)

                                                                                                                                                                     gCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAat                                                                        <  2:5399823/250‑1 (MQ=37)

                                                                                                                                                                        ggggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTTAGGGGGGGGGT‑GAATCGCTTTCCTCC‑CCCCTCCGGCACGCCCCGCCCCGC‑GTTTCCCGTCTGT‑CCCCCTCGGCGTCC‑CCCCGTG‑TCCAGCCCCCGGCGGGG‑GG‑CCTCCT‑CCCCCCCGTGGGTGGCAAT‑CACGAAAAAAAAGACCGCACGTTTCGTAAGacgcctttcttaatatag                                                                     >  1:905302/1‑234 (MQ=2)

                                                                                                                                                                        ggggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTT‑GACTCGCTTCCCCCC‑CCCCCCCGGCAGCCCCCCCCCCGC‑GGTCCCCGGCCGT‑CCCACCTGCTGTCG‑CCCGCTT‑TCGCCCCCCCGGCCGGG‑GT‑TCTTCC‑CCCCCCCGGGTGT‑GCGACACACGAAAAAAAAAACCCCAC‑CTTTCTACGAGCTCCTCTTTTAatattg                                                                    >  1:3233523/1‑249 (MQ=2)

                                                                                                                                                                        ggggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACg                                                                                                                                                                                                   <  1:2478987/132‑1 (MQ=34)

                                                                                                                                                                          ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACt                                                                                                                                                                                                                                               <  1:1829220/88‑1 (MQ=34)

                                                                                                                                                                            cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTg                                                                                                                                                                                                            <  1:3971893/120‑1 (MQ=31)

                                                                                                                                                                            cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGt                                                                                                                                                                                                 <  2:4491591/130‑1 (MQ=31)

                                                                                                                                                                            cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTc                                                                                                                                                                                                <  1:706947/131‑1 (MQ=31)

                                                                                                                                                                            cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGGGGGGGGGGGT‑GGAtcgctt                                                                                                                                                                                                                                          >  2:3112807/1‑91 (MQ=11)

                                                                                                                                                                            cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGGT‑GAAtcgcctc                                                                                                                                                                                                                                         >  1:3453611/1‑92 (MQ=11)

                                                                                                                                                                            aaCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGA‑GTTCACGGTCTGT‑CCAGCTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑gg                                                                <  1:418760/249‑1 (MQ=17)

                                                                                                                                                                                 ggTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAAt                                                                                                                      <  1:3181607/193‑1 (MQ=31)

                                                                                                                                                                                  gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGgtg                                                                                                                               <  1:1494182/184‑1 (MQ=31)

                                                                                                                                                                                    gtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGgtg                                                                                                                               <  2:3344120/182‑1 (MQ=31)

                                                                                                                                                                                      gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑TACTCCCCTCCCTCC‑CCCCCCGGGGAGCCCCCCCCCCGC‑GGTCTCCGGCTGTCCCAAAAGCCGGTGC‑CCGGTGG‑CGGACCCCCGGGCGGGG‑GT‑GTCCTC‑CCCCCCGGGGGGG‑GAAAAAAAGAAAAAAAAAGACGGCCC‑TTTCTTCGGAGCGC‑TCTTTTAATATTGCGGGTGgggggggg                                                      >  2:2594596/1‑251 (MQ=0)

                                                                                                                                                                                      gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑c                                                                                                                                                  <  1:2063746/163‑1 (MQ=31)

                                                                                                                                                                                        gCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGgtg                                                                                                                               <  1:5842130/178‑1 (MQ=31)

                                                                                                                                                                                         cAATATACGAAAAAAAAGCCCGTACTTTCGGACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑Gc                                                                                                                         <  1:5957333/182‑1 (MQ=14)

                                                                                                                                                                                            tataCGAAAAAAAGGCCCGTACTTTCGTACGAGCTCTTCTTTAAATAGGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACt                                               <  1:1411996/251‑1 (MQ=18)

                                                                                                                                                                                            tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACt                                               <  1:642137/251‑1 (MQ=33)

                                                                                                                                                                                            tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACt                                               <  1:736940/251‑1 (MQ=33)

                                                                                                                                                                                                         aGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGGT‑GAATCGCCTCCCTCC‑CCCCGCGGGGAGCCCCCCCACCGC‑GGTTACGGGCTGT‑CCCACCCGCTGTCGCCCGGTTG‑TGGACCCCCGG‑CGGGG‑GG‑TTTCCT‑ccccccccgg                                                                                                                               >  2:3565787/1‑157 (MQ=2)

                                                                                                                                                                                                                 ccttCGTACGATCTCTTCTTTAAATAGGGCGGTGAGGGGGGGCTT‑GACTCGCTTCGCCCG‑CCCCGCGGGCAGCCCGCTCACGGC‑GTTCCCGGTCCGT‑CCAACGGGGTGTCG‑CCGGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGc                          <  2:4868774/249‑1 (MQ=11)

                                                                                                                                                                                                                 cTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GACTCGCTTCCCTCC‑CCCCGCGGGGCGACCCCCCCCCGC‑GGTCCCAGGCTTT‑CCCACTGGGTGGCGCCCGGTTG‑TGAAACCCCGGCCGGGG‑CTCTCCCCC‑CCCCCGGGGGGGT‑CAAAAACA‑GAAAAAAAAACCCTAAC‑TTTTTACCGAGCCCTTTTTTAAAAATGGC‑ggggggggggggggtgcgaccccccccac                                     >  1:830033/1‑224 (MQ=0)

                                                                                                                                                                                                                 cTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGGGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATac                                                                                                                    <  1:1803170/163‑1 (MQ=17)

                                                                                                                                                                                                                   ttCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAat                                                                        <  1:2976831/204‑1 (MQ=32)

                                                                                                                                                                                                                      gTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATac                                                                                                                    <  2:3070698/158‑1 (MQ=32)

                                                                                                                                                                                                                       tACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCGGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTTGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc                     <  2:5093268/250‑1 (MQ=17)

                                                                                                                                                                                                                             ctctTCTTTAAATATGGCGGTGAGGGGGGGGGT‑GACTCGCCTCGCTCC‑CCCCCCGGGGCGCCCCCCCCCCGC‑GGTTTCGGGCTGT‑CCAACCGGCTGTCG‑CCCGGTG‑TTGGCCCCCCGGCGGGG‑GC‑TCTCCT‑cccccccgggggggg                                                                                                                          >  2:2516392/1‑137 (MQ=2)

                                                                                                                                                                                                                              cgttctgTAAAGAGGGCGGTGGGGGGGGGATT‑GACTCGTTTCGCTCG‑CCCTGCGGGCAGCGCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGATGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTg             <  1:4600139/249‑1 (MQ=255)

                                                                                                                                                                                                                                 tcttTAAATATGGCGGTGAGGGTGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTTT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑tctc                                                                                                                                            <  1:2518394/125‑1 (MQ=17)

                                                                                                                                                                                                                                 tcttTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGgtg                                                                                                                               <  1:5027060/137‑1 (MQ=32)

                                                                                                                                                                                                                                 tcttTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATac                                                                                                                    <  2:1408008/147‑1 (MQ=32)

                                                                                                                                                                                                                                      aaaTATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGc                          <  1:5255958/230‑1 (MQ=32)

                                                                                                                                                                                                                                        attggggggTGCGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGG‑GTTCCCGGTCTGT‑CCAGCTGGCTGTCG‑CCAGGTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt   <  2:3900192/244‑1 (MQ=255)

                                                                                                                                                                                                                                         tatGGCGGTGAGGGGGGGATT‑GCCTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGTTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc  <  1:4024636/251‑1 (MQ=17)

                                                                                                                                                                                                                                         tatGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc  <  1:569893/251‑1 (MQ=32)

                                                                                                                                                                                                                                         tagggcggcGAGGGGGGGATG‑GACTCGCTTCGACCG‑CCAGGCGGGCAGGCCGCTCACTGA‑GGTCACGGTCAGC‑CCAACCGGCAGTGG‑CCAGTTG‑GTCACCAGCGGTCGGGG‑CG‑TATAAG‑CCCCCGGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc  <  2:2220884/248‑1 (MQ=11)

GGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCG‑CCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGT‑CCAACTGGCTGTCG‑CCAGTTG‑TCGACCCCCGGTCGGGG‑CT‑TCTCAT‑CCCCCCGGTGTGT‑GCAATACACGAAAAAAAAGCCCGTAC‑TTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTC  >  NC_000913/1096787‑1097270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.