| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2909846 | 112 (0.800) | 19 (0.150) | 10/162 | NT | 15.1% | intergenic (‑180/+48) | pyrG/mazG | CTP synthetase/nucleoside triphosphate pyrophosphohydrolase |
| ? | NC_000913 | = 2909872 | 112 (0.880) | intergenic (‑206/+22) | pyrG/mazG | CTP synthetase/nucleoside triphosphate pyrophosphohydrolase | |||||
CTGTGCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2909740‑2909846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaagcgcCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGCTGG < NC_000913/2909872‑2909774 CTGTGCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGACAATAGCCCCTTTGGGGTACATGTTTTTCACGCAAAT > 1:1772435/1‑100CTGTGCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAAT < 2:1319682/100‑1CTGTGCCACAAACTTTCATTATCCCTCCTCTTCGCCAACGCACTATTGAAATACCGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAAT > 1:1772463/1‑100 GCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGATAAAATAGCCCTTTTGGGGTAAATGTTTTGGACGCAAATCAgg < 2:2565255/100‑3 GCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAG > 2:1800866/1‑100 GCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAG > 2:531821/1‑100 GCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAG < 2:3344576/100‑1 CCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTTACGCAAATCAAGC > 1:2946910/1‑100 CCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGC > 2:665383/1‑100 CACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCG > 1:2731121/1‑100 CACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCG > 1:3756168/1‑100 CACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAAGCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCG < 1:3177544/100‑1 CAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTCTGGGGTAAATGTTTTTGACGCAACTCAAcc > 1:1303470/1‑95 TTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGC‑‑‑‑T‑TGTCATTTTTTAAATGACAAGC < 2:1995930/100‑1 TCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGC‑‑‑‑T‑TGTCATTTTTTAAATGACAAGCG < 1:3711425/100‑1 GCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTT < 1:607633/100‑1 TATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATT < 2:3324185/100‑1 TATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATT < 2:2301156/100‑1 ATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTT < 1:2863331/100‑1 ATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGC‑‑‑‑T‑TGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTC < 2:1123123/100‑1 TTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTG < 1:190667/100‑1 TTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTG < 2:1575862/100‑1 TTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTGGTGTCATTTTTTAAATGACAAGCGCTTGATTTG < 1:2751696/100‑1 TGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTT < 1:2301500/98‑1 GAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCG < 2:917988/100‑1 GAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCG < 2:1796449/100‑1 GAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCG < 1:918373/100‑1 AAATCAGGATTGAGAAAATAGCCCCTTTGGTGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGT < 1:1826953/100‑1 AAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTGTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTT < 2:1128595/96‑1 AATCATGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTC < 2:159513/100‑1 AATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTC < 2:3181211/100‑1 ATGTTTTTGACGCAAATGAAGCGCTATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTC < 1:1991796/98‑1 TCAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGT < 2:41735/100‑1 CAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTG > 2:2717947/1‑100 CAAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTG < 2:635703/100‑1 AAGCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGC < 2:1519882/100‑1 GCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAGAACATTTACCCCAAAGGGGCTATTTGCTCACTCCTGATTTCAATAGTGCGC < 1:3499137/100‑1 GCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGC > 2:1331536/1‑100 GCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGC > 2:1517739/1‑100 GCGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGC > 1:946704/1‑100 CGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGCT > 2:1800673/1‑100 CGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGCT < 2:1455194/100‑1 CGCCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGCT < 2:1643418/100‑1 CCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGCTGG < 2:3011563/100‑1 CCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGCTGG < 1:860735/100‑1 CTGTGCCACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2909740‑2909846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaagcgcCATTTGTGTCATTTTTTAAATGACAAGCGCTTGATTTGCGTCAAAAACATTTACCCCAAAGGGGCTATTTTCTCACTCCTGATTTCAATAGTGCGCTGG < NC_000913/2909872‑2909774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |