New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2909846112 (0.800)19 (0.150) 10/162 NT 15.1% intergenic (‑180/+48) pyrG/mazG CTP synthetase/nucleoside triphosphate pyrophosphohydrolase
?NC_000913 = 2909872 112 (0.880)intergenic (‑206/+22) pyrG/mazG CTP synthetase/nucleoside triphosphate pyrophosphohydrolase

Only 100 of 165 total aligned reads displayed.

GCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTCCAG  >  NC_000913/2909773‑2909971
                                                                                                   |                                                                                                   
 ccAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGg                                                                                                    <  1:860735‑M2/100‑2 (MQ=255)
 ccAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGg                                                                                                    <  2:3011563‑M2/100‑2 (MQ=255)
   aGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcg                                                                                                  >  2:1800673‑M2/1‑97 (MQ=255)
    gcgcACTATTGAAATCAGGAGTGAGCAAATAGCCCCTTTGGGGTAAATGTTCTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgc                                                                                                 <  1:3499137‑M2/100‑5 (MQ=255)
    gcgcACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgc                                                                                                 >  1:946704‑M2/1‑96 (MQ=255)
    gcgcACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgc                                                                                                 >  2:1331536‑M2/1‑96 (MQ=255)
    gcgcACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgc                                                                                                 >  2:1517739‑M2/1‑96 (MQ=255)
      gcACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgctt                                                                                               <  2:1519882‑M2/100‑7 (MQ=255)
       cACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttg                                                                                              >  2:2717947‑M2/1‑93 (MQ=255)
       cACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttg                                                                                              <  2:635703‑M2/100‑8 (MQ=255)
        aCTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttga                                                                                             <  2:41735‑M2/100‑9 (MQ=255)
          tATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGAcc                                                                                           >  1:1009080/1‑100 (MQ=255)
            ttGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTTATTTTTGTTTCAAATGGCGCTTGACcgc                                                                                         >  1:978458/1‑100 (MQ=255)
              gAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGt                                                                                       >  2:1297500/1‑100 (MQ=255)
               aaaTCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTa                                                                                      <  1:3766206/100‑1 (MQ=255)
                aaTCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTaa                                                                                     >  1:3397064/1‑100 (MQ=255)
                  tCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAAtt                                                                                   >  1:2163775/1‑100 (MQ=255)
                  tCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAAtt                                                                                   <  2:1278355/100‑1 (MQ=255)
                   cAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTc                                                                                  <  2:1887050/100‑1 (MQ=255)
                     ggAGTGAGACAATAGCCCCTTTGGGGTAAATGCTTTTGACGCAACTCACGCGCTTGTCATTTAAAAAATGACCCAAATGGCGCTTGACCGCGTAATTccc                                                                                <  1:2264645/100‑1 (MQ=255)
                      gAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCt                                                                               <  2:3604278/100‑1 (MQ=255)
                      gAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCt                                                                               <  1:1066191/100‑1 (MQ=255)
                        gTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTa                                                                             <  1:2161265/100‑1 (MQ=255)
                         tGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTag                                                                            <  2:1387730/100‑1 (MQ=255)
                          gagaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTaga                                                                           >  1:2950702/1‑100 (MQ=255)
                          gagaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTaga                                                                           <  1:2847087/100‑1 (MQ=255)
                          gagaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTaga                                                                           >  1:726570/1‑100 (MQ=255)
                          gagaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTaga                                                                           <  2:2343436/100‑1 (MQ=255)
                          gagaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTaga                                                                           >  2:3276914/1‑100 (MQ=255)
                          gagaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATAgcgcttcatttgcgtcaaaaacat                                                                             <  1:1991796‑M2/98‑25 (MQ=255)
                           agaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTagag                                                                          >  2:283828/1‑100 (MQ=255)
                           agaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTagag                                                                          <  1:3032915/100‑1 (MQ=255)
                                 tAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAAt                                                                    >  2:917951/1‑100 (MQ=255)
                                 tAGCCCCTTGGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCaa                                                                     <  2:3072640/99‑1 (MQ=255)
                                  aGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAAtt                                                                   <  2:2749980/100‑1 (MQ=255)
                                   gCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAAttt                                                                  >  2:1022178/1‑100 (MQ=255)
                                   gCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAAtt                                                                   <  1:1809848/99‑1 (MQ=255)
                                    ccccTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAAtt                                                                   >  1:3239864/1‑98 (MQ=255)
                                      tcggtGGGGTAAATGTTTTTGACGCAATTCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCt                                                               >  1:3608853/5‑100 (MQ=255)
                                            gggTAAATGTTTTTGTCGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGtt                                                         <  2:3745072/100‑1 (MQ=255)
                                             ggTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGttt                                                        >  2:388514/1‑100 (MQ=255)
                                                aaaTGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCATTTTAc                                                     <  1:1116218/100‑1 (MQ=255)
                                                aaaTGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGATTGAAAGCATAATTCACTTAGAGAAAAATTTCCTGACGCTTTa                                                      >  1:160001/1‑99 (MQ=255)
                                                 aaTGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTAACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTAcc                                                    <  2:1366747/100‑1 (MQ=255)
                                                        ttGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGcc                                             <  1:917946/100‑1 (MQ=255)
                                                          gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatt                                           <  2:3181211‑M2/100‑59 (MQ=255)
                                                          gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcatgatt                                           <  2:159513‑M2/100‑59 (MQ=255)
                                                          gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAg                                           >  2:2769799/1‑100 (MQ=255)
                                                          gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAg                                           <  2:427202/100‑1 (MQ=255)
                                                          gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAg                                           >  2:1357742/1‑100 (MQ=255)
                                                          gACGCAAATCAAGCGCTTGTCAGTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAg                                           <  1:33153/100‑1 (MQ=255)
                                                           aCGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttacaccaaaggggctattttctcaatcctgattt                                          <  1:1826953‑M2/100‑60 (MQ=255)
                                                            cGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGAc                                         >  1:1555567/1‑100 (MQ=255)
                                                            cGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGAc                                         >  2:2926635/1‑100 (MQ=255)
                                                            cGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATAACCTGCCGTTTTACCAGTTGCCAg                                           >  1:3464365/1‑98 (MQ=255)
                                                              cAAATCAAGCGCTTGTCATTTAAAAAATGACACCAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaa                                       <  1:2751696‑M2/100‑63 (MQ=255)
                                                              cAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaa                                       <  1:190667‑M2/100‑63 (MQ=255)
                                                              cAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaa                                       <  2:1575862‑M2/100‑63 (MQ=255)
                                                              cAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGActt                                       >  2:1273026/1‑100 (MQ=255)
                                                               aaaTCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcacaaacatttaccccaaaggggctattttctcactcctgattt                                          <  2:1128595‑M2/96‑60 (MQ=255)
                                                               aaaTCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttca                                        <  1:2301500‑M2/98‑62 (MQ=255)
                                                                aaTCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaata                                     <  2:2301156‑M2/100‑65 (MQ=255)
                                                                aaTCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaata                                     <  2:3324185‑M2/100‑65 (MQ=255)
                                                                 aTCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTACTGCCGTTTTACCTGTTGCCAGActtctt                                    >  1:1792131/1‑100 (MQ=255)
                                                                  tCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACttcttc                                   <  1:601282/100‑1 (MQ=255)
                                                                    aaGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCa                                 >  2:1657781/1‑100 (MQ=255)
                                                                    aaGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCa                                 <  1:1357737/100‑1 (MQ=255)
                                                                    aaGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCa                                 <  1:3239470/100‑1 (MQ=255)
                                                                    aaGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCa                                 <  1:28974/100‑1 (MQ=255)
                                                                     aGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCAt                                >  2:3467771/1‑100 (MQ=255)
                                                                      tagcTTGTCATTTAAAAAATGGCACATCTGCCGCTTTACCGCGTAATTCCCTGTACGATCAATTTCATACCGTTTTCCCTGTAGCCAGActta                                      <  1:3747207/91‑2 (MQ=255)
                                                                       cgcTTGTCATTTAAAAAATGACAA‑‑‑cgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaatagtgcgctggcga                           <  1:3711425‑M2/100‑76 (MQ=255)
                                                                         cTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGtt                            >  1:1007888/1‑100 (MQ=255)
                                                                           tGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTc                          >  1:2707602/1‑100 (MQ=255)
                                                                           tGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTc                          <  1:2689646/100‑1 (MQ=255)
                                                                           tGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCAAGACTTCTTCCCTTGTTTc                          >  1:1756482/1‑100 (MQ=255)
                                                                            gTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCg                         >  2:3405451/1‑100 (MQ=255)
                                                                              cATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTCCCTGTTGCCAGACTTCTTCCGTTGTTTCGAg                       >  1:2498177/1‑100 (MQ=255)
                                                                               aTTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAgg                      >  1:2947190/1‑100 (MQ=255)
                                                                               aTTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAgg                      <  1:439703/100‑1 (MQ=255)
                                                                                 ttAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTc                    <  1:1438978/100‑1 (MQ=255)
                                                                                   aaaaaaTGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGCCTTCTTCCATTGTTTCGAGGTCaa                  >  1:680580/1‑100 (MQ=255)
                                                                                    aaaaaTGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAac                 <  2:222139/100‑1 (MQ=255)
                                                                                    aaaaaTGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAac                 <  2:3405632/100‑1 (MQ=255)
                                                                                      aaaTGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCCacac               >  1:277001/1‑100 (MQ=255)
                                                                                       aaTGACACATATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTGCCTGCCGTTTTACCTGTTGCCAGACTTCATCCATTGTTTCGAGGTCAACAcc              <  1:1685583/100‑1 (MQ=255)
                                                                                       aaTGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACAcc              >  1:948216/1‑100 (MQ=255)
                                                                                         tGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTg            <  2:3024601/100‑1 (MQ=255)
                                                                                         tGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTg            <  1:1273021/100‑1 (MQ=255)
                                                                                           acacAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTc          >  2:1409175/1‑100 (MQ=255)
                                                                                           acacAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTc          <  2:2733523/100‑1 (MQ=255)
                                                                                              caAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCAtt       >  2:10123/1‑100 (MQ=255)
                                                                                                 aTGGCGCTTGACCGCGTAATTCCCTTCGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTcc    <  1:2412754/100‑1 (MQ=255)
                                                                                                 aTGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTcc    <  1:53646/100‑1 (MQ=255)
                                                                                                 aTGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTcc    <  2:1504105/100‑1 (MQ=255)
                                                                                                 aTGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTcc    <  1:2402331/100‑1 (MQ=255)
                                                                                                 aTGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTcc    <  1:2303733/100‑1 (MQ=255)
                                                                                                 aTGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTcc    <  2:640837/100‑1 (MQ=255)
                                                                                                   ggCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTCCAg  <  2:3559161/100‑1 (MQ=255)
                                                                                                   ggCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTCCAg  <  1:1570600/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTCCAG  >  NC_000913/2909773‑2909971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.