New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620614NA (NA)26 (0.200) 9/166 NT 100% coding (1423/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620635 0 (0.000)coding (1444/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGC  >  NC_000913/3620531‑3620712
                                                                                   |                                                                                                   
aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCAGAACCAGTTAACGTCAGCCACCGGGCC                                                                                    >  1:3434302‑M2/1‑100 (MQ=255)
aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCC                                                                                    >  2:993743‑M2/1‑100 (MQ=255)
aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCC                                                                                    >  2:2722271‑M2/1‑100 (MQ=255)
aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCC                                                                                    >  1:309488‑M2/1‑100 (MQ=255)
aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCC                                                                                    >  2:3022062‑M2/1‑100 (MQ=255)
aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCC                                                                                    >  1:221136‑M2/1‑100 (MQ=255)
aTGTGGTGACGGGCCTCAGCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCC                                                                                    >  1:2628953‑M2/1‑100 (MQ=255)
 tgtgGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCT                                                                                   <  1:501238‑M2/100‑1 (MQ=255)
 tgtgGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCT                                                                                   >  1:2369001‑M2/1‑100 (MQ=255)
  gtggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTG                                                                                  >  2:3241265‑M2/1‑100 (MQ=255)
  gtggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACATCAGCCACCGGGCCTG                                                                                  <  1:2221151‑M2/100‑1 (MQ=255)
  gtggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCAACACAACCAGTTAACGTCAGCCACCGGGCCTG                                                                                  <  1:840252‑M2/100‑1 (MQ=255)
   tggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGA                                                                                 <  1:2813565‑M2/100‑1 (MQ=255)
   tggtgACGGGCCTCATCACGCGCATAACCACGCCGGATAGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGA                                                                                 <  1:3132736‑M2/100‑1 (MQ=255)
    ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGAC                                                                                <  2:161000‑M2/100‑1 (MQ=255)
    ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGAC                                                                                <  1:3062611‑M2/100‑1 (MQ=255)
    ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGAC                                                                                <  2:922359‑M2/100‑1 (MQ=255)
    ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGAC                                                                                <  1:2004222‑M2/100‑1 (MQ=255)
     gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGccg                                                                               <  1:576428‑M2/100‑4 (MQ=255)
     gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACG                                                                               <  2:2089825‑M2/100‑1 (MQ=255)
     gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACG                                                                               <  2:2951027‑M2/100‑1 (MQ=255)
          gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaac                                                                          >  2:3571818‑M2/1‑95 (MQ=255)
          gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaac                                                                          >  2:1917585‑M2/1‑95 (MQ=255)
          gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaac                                                                          >  2:849730‑M2/1‑95 (MQ=255)
           ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaact                                                                         >  1:2222625‑M2/1‑94 (MQ=255)
           ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaact                                                                         >  2:2334360‑M2/1‑94 (MQ=255)
           ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaact                                                                         >  2:379203‑M2/1‑94 (MQ=255)
            gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaactg                                                                        >  2:2780085‑M2/1‑93 (MQ=255)
            gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaactg                                                                        >  1:1924906‑M2/1‑93 (MQ=255)
            gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaact                                                                         >  1:1978540‑M2/1‑93 (MQ=255)
             ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCCCCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaactgg                                                                       >  2:3638866‑M2/1‑92 (MQ=255)
             ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaactgg                                                                       >  2:3560548‑M2/1‑92 (MQ=255)
              cTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaactgg                                                                       >  1:3689079‑M2/1‑91 (MQ=255)
                 ggtggttatagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTgc                                                                   >  1:509123‑M2/35‑100 (MQ=255)
                     gttatagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCg                                                               >  1:1508001‑M2/31‑100 (MQ=255)
                        atagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGAGGGGCTGGAATTGCGCCggg                                                             >  2:2168503‑M2/28‑99 (MQ=255)
                        atagtaaaacgccgatgccctgccatcCGGCGTTTTACTACAACCACCACAACCAGTTAACGTCAGCCACCGGGCCCGACGGGCTGGAATTGCTCCg                                                               >  1:1877590‑M2/28‑97 (MQ=255)
                         tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGaa                                                           >  2:880018‑M2/27‑100 (MQ=255)
                         tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGaa                                                           >  2:532635‑M2/27‑100 (MQ=255)
                         tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTACCGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGaa                                                           >  1:774424‑M2/27‑100 (MQ=255)
                         tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGCGCTGGAATTGCGCCGGGaa                                                           >  1:2573773‑M2/27‑100 (MQ=255)
                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAata                                                         >  2:179129‑M2/25‑100 (MQ=255)
                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                                                         >  2:3066664‑M2/25‑100 (MQ=255)
                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                                                         >  2:1082132‑M2/25‑100 (MQ=255)
                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                                                         >  2:2078812‑M2/25‑100 (MQ=255)
                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                                                         >  2:2179462‑M2/25‑100 (MQ=255)
                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                                                         >  2:3138883‑M2/25‑100 (MQ=255)
                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                                                         >  1:1554662‑M2/25‑100 (MQ=255)
                            taaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAatat                                                        >  1:135744‑M2/24‑100 (MQ=255)
                             aacacgccgatgccgtgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCAACGGGCCTGACGGGCTGGATTTGCgcaggcca                                                           >  1:2961909‑M2/23‑93 (MQ=255)
                             aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatg                                                       >  2:2986048‑M2/23‑100 (MQ=255)
                             aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatg                                                       >  2:2427356‑M2/23‑100 (MQ=255)
                             aaaacgccgatgccctgccatcCGGCGTTTTACAATAACCACCACAACCAGTTAACGTCAGCCACCGGGTCTGACGGGCTGGAATTGCGCCGGAAATatg                                                       >  1:1924125‑M2/23‑100 (MQ=255)
                               aacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatgat                                                     >  2:3130858‑M2/21‑100 (MQ=255)
                               aacgccgatgccctgccaccCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatgat                                                     >  2:3657003‑M2/21‑100 (MQ=255)
                                acgccgatgccctaccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatgatg                                                    >  2:2553788‑M2/20‑100 (MQ=255)
                                 cgccgatgccctgccatcCGGCGTTTTACTATAACCAGCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatga                                                      >  1:2032617‑M2/19‑97 (MQ=255)
                                 cGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGTGGCTGACGttaactggttgtggtggttatagtaaaa                                                   >  1:3603380‑M2/1‑72 (MQ=255)
                                                   CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCa                                 <  1:1203738‑M2/100‑1 (MQ=255)
                                                    GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAg                                <  1:1433716‑M2/100‑1 (MQ=255)
                                                    GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAg                                <  1:86501‑M2/100‑1 (MQ=255)
                                                    GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAg                                <  1:2942095‑M2/100‑1 (MQ=255)
                                                    GGCGTTTTACTAGAACCACCACAACCGGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGattn                                  <  1:2623201‑M2/98‑2 (MQ=255)
                                                     GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAgg                               >  2:3678094‑M2/1‑100 (MQ=255)
                                                     GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGAGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAgg                               <  1:2400986‑M2/100‑1 (MQ=255)
                                                      CGTTTTACTATAACCACCACAACCAGTTAACGTCCGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGa                              <  2:3366116‑M2/100‑1 (MQ=255)
                                                      CGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGa                              <  2:534692‑M2/100‑1 (MQ=255)
                                                       GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAAGaa                             >  1:3035108‑M2/1‑100 (MQ=255)
                                                        TTTTACTATAACCACCACAACCAGTTCACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa                            >  2:2311899‑M2/1‑100 (MQ=255)
                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa                            >  2:2245728‑M2/1‑100 (MQ=255)
                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa                            >  1:49517‑M2/1‑100 (MQ=255)
                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa                            >  1:689863‑M2/1‑100 (MQ=255)
                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa                            <  2:2147037‑M2/100‑1 (MQ=255)
                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa                            >  2:1206512‑M2/1‑100 (MQ=255)
                                                                        acaACCAGTTAACGTCAGCCACCGGGCCTGACGtaaactggttgtggtggtcatagtaaaacgcagatgccctgccatccggcgtggttatgcgc                 <  1:1298418‑M2/95‑63 (MQ=255)
                                                                           gccaGTTAACGTCAGCCACCGGGCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgag         <  2:3629182‑M2/99‑71 (MQ=255)
                                                                             cAGTTAACGTCAGCCACCGGGCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggc       <  2:2757095‑M2/100‑73 (MQ=255)
                                                                              aGTTAACGTCAGCCACCGGGCCTGACGttaactggttgtggtggttatagtaaaatgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcc      <  2:2979616‑M2/100‑74 (MQ=255)
                                                                              aGTTAACGTCAGCCACCGGGCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatggggcc      <  1:3383870‑M2/100‑74 (MQ=255)
                                                                               gTTAACGTCAGCCACCGGGCCTGACGttaactggttgtggtggttgtagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggccc     <  1:3102121‑M2/100‑75 (MQ=255)
                                                                               gTTAACGTCAGCCACCGGGCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggccc     <  2:152783‑M2/100‑75 (MQ=255)
                                                                                 tAACGTCAGCCACCGGGCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgt   <  2:699832‑M2/100‑77 (MQ=255)
                                                                                 tAACGTCAGCCACCGGGCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcccgt   <  2:3484601‑M2/100‑77 (MQ=255)
                                                                                 tAACGTCAGCCACCGGGCCTGACGttaactggctgcggtggttatagtaaaacgccgatgccctgccatccggcgtggtgacgcgcctgatgaggc       <  1:2225052‑M2/96‑73 (MQ=255)
                                                                                  aaCGTCAGCCACCGGGCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtggtgaggccc     <  1:2916225‑M2/97‑75 (MQ=255)
                                                                                  aaCGTCAGCCACCGGGCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtc  <  1:3254296‑M2/100‑78 (MQ=255)
                                                                                  aaCGTCAGCCACCGGGCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtc  <  2:1729674‑M2/100‑78 (MQ=255)
                                                                                  aaCGTCAGCCACCGGGCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcccgtc  <  2:495294‑M2/100‑78 (MQ=255)
                                                                                  aaCGTCAGCCACCGGGCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcccgtc  <  1:902942‑M2/100‑78 (MQ=255)
                                                                                   |                                                                                                   
ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGC  >  NC_000913/3620531‑3620712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.