| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3620614 | NA (NA) | 26 (0.200) | 9/166 | NT | 100% | coding (1423/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3620635 | 0 (0.000) | coding (1444/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
GTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACA > NC_000913/3620536‑3620734 | gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG < 2:2951027‑M2/100‑1 (MQ=255)gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG < 2:2089825‑M2/100‑1 (MQ=255) gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac > 2:1917585‑M2/1‑95 (MQ=255) gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac > 2:3571818‑M2/1‑95 (MQ=255) gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac > 2:849730‑M2/1‑95 (MQ=255) ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact > 2:2334360‑M2/1‑94 (MQ=255) ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact > 1:2222625‑M2/1‑94 (MQ=255) ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact > 2:379203‑M2/1‑94 (MQ=255) gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactg > 2:2780085‑M2/1‑93 (MQ=255) gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactg > 1:1924906‑M2/1‑93 (MQ=255) gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact > 1:1978540‑M2/1‑93 (MQ=255) ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCCCCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactgg > 2:3638866‑M2/1‑92 (MQ=255) ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactgg > 2:3560548‑M2/1‑92 (MQ=255) cTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactgg > 1:3689079‑M2/1‑91 (MQ=255) ggtggttatagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTgc > 1:509123‑M2/35‑100 (MQ=255) gttatagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAAATACGCCg > 1:1508001‑M2/31‑100 (MQ=255) atagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAGGGGCTGGAATTGCGCCggg > 2:2168503‑M2/28‑99 (MQ=255) atagtaaaacgccgatgccctgccatcCGGCGTTTTACTACAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCCGACGGGCTGGAATTGCTCCg > 1:1877590‑M2/28‑97 (MQ=255) tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAAATACGCCGGGaa > 2:532635‑M2/27‑100 (MQ=255) tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAAATACGCCGGGaa > 2:880018‑M2/27‑100 (MQ=255) tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTACCGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGaa > 1:774424‑M2/27‑100 (MQ=255) tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGCGCTGGAATTGCGCCGGGaa > 1:2573773‑M2/27‑100 (MQ=255) gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAAATACGCCGGGAata > 2:179129‑M2/25‑100 (MQ=255) gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAata > 2:2179462‑M2/25‑100 (MQ=255) gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAata > 2:2078812‑M2/25‑100 (MQ=255) gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAata > 1:1554662‑M2/25‑100 (MQ=255) gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAata > 2:3138883‑M2/25‑100 (MQ=255) gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAata > 2:1082132‑M2/25‑100 (MQ=255) gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAata > 2:3066664‑M2/25‑100 (MQ=255) taaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAatat > 1:135744‑M2/24‑100 (MQ=255) aacacgccgatgccgtgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCAACGG‑GCCTGACGGGCTGGATTTGCgcaggcca > 1:2961909‑M2/23‑93 (MQ=255) aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATatg > 2:2986048‑M2/23‑100 (MQ=255) aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATatg > 2:2427356‑M2/23‑100 (MQ=255) aaaacgccgatgccctgccatcCGGCGTTTTACAATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GTCTGACGGGCTGGAATTGCGCCGGAAATatg > 1:1924125‑M2/23‑100 (MQ=255) aacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATatgat > 2:3130858‑M2/21‑100 (MQ=255) aacgccgatgccctgccaccCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATatgat > 2:3657003‑M2/21‑100 (MQ=255) acgccgatgccctaccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATatgatg > 2:2553788‑M2/20‑100 (MQ=255) cgccgatgccctgccatcCGGCGTTTTACTATAACCAGCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATatga > 1:2032617‑M2/19‑97 (MQ=255) cGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactggttgtggtggttatagtaaaa > 1:3603380‑M2/1‑72 (MQ=255) CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCa < 1:1203738‑M2/100‑1 (MQ=255) GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAg < 1:1433716‑M2/100‑1 (MQ=255) GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAg < 1:86501‑M2/100‑1 (MQ=255) GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAg < 1:2942095‑M2/100‑1 (MQ=255) GGCGTTTTACTAGAACCACCACAACCGGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGattn < 1:2623201‑M2/98‑2 (MQ=255) GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAgg > 2:3678094‑M2/1‑100 (MQ=255) GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGA‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAgg < 1:2400986‑M2/100‑1 (MQ=255) CGTTTTACTATAACCACCACAACCAGTTAACGTCCGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGa < 2:3366116‑M2/100‑1 (MQ=255) CGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGa < 2:534692‑M2/100‑1 (MQ=255) GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAAGaa > 1:3035108‑M2/1‑100 (MQ=255) TTTTACTATAACCACCACAACCAGTTCACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa > 2:2311899‑M2/1‑100 (MQ=255) TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa > 2:1206512‑M2/1‑100 (MQ=255) TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa > 1:689863‑M2/1‑100 (MQ=255) TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa > 1:49517‑M2/1‑100 (MQ=255) TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa < 2:2147037‑M2/100‑1 (MQ=255) TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGaaa > 2:2245728‑M2/1‑100 (MQ=255) acaACCAGTTAACGTCAGCCACCGG‑GCCTGACGtaaactggttgtggtggtcatagtaaaacgcagatgccctgccatccggcgtggttatgcgc < 1:1298418‑M2/95‑63 (MQ=255) gccaGTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgag < 2:3629182‑M2/99‑71 (MQ=255) cAGTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggc < 2:2757095‑M2/100‑73 (MQ=255) aGTTAACGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaatgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcc < 2:2979616‑M2/100‑74 (MQ=255) aGTTAACGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatggggcc < 1:3383870‑M2/100‑74 (MQ=255) gTTAACGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttgtagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggccc < 1:3102121‑M2/100‑75 (MQ=255) gTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggccc < 2:152783‑M2/100‑75 (MQ=255) tAACGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgt < 2:699832‑M2/100‑77 (MQ=255) tAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcccgt < 2:3484601‑M2/100‑77 (MQ=255) tAACGTCAGCCACCGG‑GCCTGACGttaactggctgcggtggttatagtaaaacgccgatgccctgccatccggcgtggtgacgcgcctgatgaggc < 1:2225052‑M2/96‑73 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtggtgaggccc < 1:2916225‑M2/97‑75 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtc < 1:3254296‑M2/100‑78 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtc < 2:1729674‑M2/100‑78 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcccgtc < 1:902942‑M2/100‑78 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcccgtc < 2:495294‑M2/100‑78 (MQ=255) cGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaacacgccgatgccctgccagccggcgtggttatgcccgtaatgaggcccgtcac < 1:2585749‑M2/100‑80 (MQ=255) cTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgta < 2:3242262‑M2/100‑95 (MQ=255) cTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgta > 1:3700254‑M2/1‑6 (MQ=255) cTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgta < 2:504346‑M2/100‑95 (MQ=255) tGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtac < 2:787249‑M2/100‑96 (MQ=255) gACGttgacgggttgtggtgggtatagtaaaacgccgatgccctgccatgcggcgtggttatgcgcgtgatgaggcccgtcacgacatccggggtgta < 1:3392814‑M2/98‑95 (MQ=255) gACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtact < 1:51618‑M2/100‑97 (MQ=255) cGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactct < 2:980493‑M2/100‑99 (MQ=255) cGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactct < 1:2803476‑M2/100‑99 (MQ=255) cGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactct < 2:420036‑M2/100‑99 (MQ=255) cGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactct < 1:3135933‑M2/100‑99 (MQ=255) gttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcgcgtcaccacatccgggctgtactctg < 2:1318631‑M2/100‑100 (MQ=255) gttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactctg > 2:3748239‑M2/1‑1 (MQ=255) gttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactctg < 2:3287907‑M2/100‑100 (MQ=255) gttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactctg < 2:3057753‑M2/100‑100 (MQ=255) gttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactctg > 2:2638629‑M2/1‑1 (MQ=255) | GTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACA > NC_000913/3620536‑3620734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |