New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4638653131 (0.940)4 (0.030) 4/166 NT 3.1% coding (476/1353 nt) creD inner membrane protein
?NC_000913 = 4638668 130 (1.000)coding (491/1353 nt) creD inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 166 total aligned reads displayed.

CGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAA  >  NC_000913/4638554‑4638752
                                                                                                   |                                                                                                   
cgcgTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCC                                                                                                     <  2:2176034‑M1/100‑1 (MQ=255)
cgcgTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCC                                                                                                     <  2:1000460‑M1/100‑1 (MQ=255)
   gTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGACTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGa                                                                                                  >  1:1945118/1‑100 (MQ=255)
   gTCTTAGCGAACTCAACGCGCCAAATATCACCTTACGCACGCCCTCTATTGTGCTTAGAGCCGGCGACGCGCGTGGTATTGGTCTGGTGAAAGCGCCTGa                                                                                                  >  1:2615068/1‑100 (MQ=255)
    tCTTAGCGAACTCAACGCGCTAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTg                                                                                                   <  1:1252535/98‑1 (MQ=255)
     cTTAGCGAACTCAACGCGCCACATCACTCCTTAGGCACATCTTTTAATGTGATTAGCAACGGAGATGCGAGTACTGTTGGTGAGGTGAAATCGCTTgtat                                                                                                >  1:303715/1‑97 (MQ=255)
     cTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAg                                                                                                <  2:3365456/100‑1 (MQ=255)
      ttAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGt                                                                                               <  2:3068242/100‑1 (MQ=255)
      ttAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGt                                                                                               <  1:984655/100‑1 (MQ=255)
      ttAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGt                                                                                               <  2:1023210/100‑1 (MQ=255)
         gCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCACTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaa                                                                                            >  2:1048661/1‑100 (MQ=255)
           gAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacg                                                                                          >  1:3381502/1‑100 (MQ=255)
           gAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacg                                                                                          <  2:2163369/100‑1 (MQ=255)
              cTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaa                                                                                       >  2:94968/1‑100 (MQ=255)
                cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACg                                                                                     <  1:1962987‑M2/100‑2 (MQ=255)
                cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACg                                                                                     >  1:1911559‑M2/1‑99 (MQ=255)
                cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACg                                                                                     <  1:3069390‑M2/100‑2 (MQ=255)
                cAACGCGCCAAATATCACCTTAGGCAAGCCATTAATTGTGATTAGCGTCGGGGAGGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACg                                                                                     <  2:1419922‑M2/100‑2 (MQ=255)
                   cgcgCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACggcg                                                                                  >  1:445193‑M2/1‑96 (MQ=255)
                   cgcgCCAAATACCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGTGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCgttccgttaacttcaggcg                                                                                  <  1:767429‑M1/100‑20 (MQ=255)
                      gcCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTg                                                                               >  2:229546/1‑100 (MQ=255)
                      gcCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTg                                                                               <  2:3469150/100‑1 (MQ=255)
                       ccAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGa                                                                              >  1:1149108/1‑100 (MQ=255)
                        cAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAc                                                                             >  1:202035/1‑100 (MQ=255)
                        cAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCCCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAc                                                                             <  2:3534305/100‑1 (MQ=255)
                         aaaTATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAcc                                                                            <  2:2657818/100‑1 (MQ=255)
                          aaTATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCa                                                                           <  1:443572/100‑1 (MQ=255)
                           atatCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCAt                                                                          >  1:3707949/1‑100 (MQ=255)
                            tatCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCAtt                                                                         >  1:2254906/1‑100 (MQ=255)
                             atCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTg                                                                        <  2:2410190/100‑1 (MQ=255)
                             atCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTg                                                                        <  2:2100959/100‑1 (MQ=255)
                             atCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAAAGGAACGGCGCTGACCATTg                                                                        <  1:2651209/100‑1 (MQ=255)
                              tCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGa                                                                       <  1:1338561/100‑1 (MQ=255)
                                aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                     >  2:1286188/1‑100 (MQ=255)
                                aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                     >  1:1248905/1‑100 (MQ=255)
                                aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                     >  1:3194640/1‑100 (MQ=255)
                                    tAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCgg                                                                 <  1:343282/100‑1 (MQ=255)
                                     aGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCgg                                                                 <  1:3091121/99‑1 (MQ=255)
                                         aggtaaTTTATTGTGTTTAGCTTCGGGGATGGGCGTTGTATTGGTGTTGTGAAAGCGCCTGAAGTTTACTTAACGGCGCTGACCATTGAAc                                                                     <  1:3012905/86‑1 (MQ=255)
                                          aGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCGGGCACCgg                                                           >  2:2955173/1‑100 (MQ=255)
                                          aGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCgg                                                           >  1:1019784/1‑100 (MQ=255)
                                          aGCCATTTATTGTGATTAGCGTCGGAGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGTCGCTGAGCATTGAACCCGGCACCgg                                                           <  1:1719767/100‑1 (MQ=255)
                                           gCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCggg                                                          <  2:2475550/100‑1 (MQ=255)
                                           gCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCggg                                                          <  2:3031288/100‑1 (MQ=255)
                                           gCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCggg                                                          <  2:1813483/100‑1 (MQ=255)
                                            ccATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGt                                                         <  2:2341867/100‑1 (MQ=255)
                                             cATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGtt                                                        >  2:2190639/1‑100 (MQ=255)
                                             cATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGt                                                         >  2:1154931/1‑99 (MQ=255)
                                              aTTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTa                                                       <  1:2297092/100‑1 (MQ=255)
                                              aTTTATTGTGATTAGCGTCGGGGATGCGCGGGGTATTGGTGTGGTGAAAGCGCGTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGCTa                                                       >  1:3066662/1‑100 (MQ=255)
                                                ttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTaga                                                     <  2:219857/100‑1 (MQ=255)
                                                 tgttGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaat                                                    <  1:819329/98‑5 (MQ=255)
                                                 tATTGTGATTAGCTTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagag                                                    <  1:91582/100‑1 (MQ=255)
                                                 tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaat                                                    <  2:255494/100‑5 (MQ=255)
                                                 tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagag                                                    <  1:3689615/100‑1 (MQ=255)
                                                 tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagag                                                    <  2:2525818/100‑1 (MQ=255)
                                                  aTTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCCGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGc                                                   <  2:3151902/100‑1 (MQ=255)
                                                   ttGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaatgg                                                  <  2:686673/100‑7 (MQ=255)
                                                     gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAg                                                >  2:56987/1‑100 (MQ=255)
                                                     gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAg                                                >  1:1682673/1‑100 (MQ=255)
                                                     gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCCGACCATTGAACCCGGCACCGGGTTAGAGCAAg                                                >  1:1871039/1‑100 (MQ=255)
                                                      tgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAgg                                               <  2:1806198/100‑1 (MQ=255)
                                                      tgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAgg                                               <  1:2906511/100‑1 (MQ=255)
                                                         ttAGCGTCGGGGATGCGCGTTGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCgg                                            >  2:1693155/1‑100 (MQ=255)
                                                           aGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGc                                          <  1:3366223/100‑1 (MQ=255)
                                                             cGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAg                                        >  2:3657262/1‑100 (MQ=255)
                                                              gTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAgg                                       >  2:512878/1‑100 (MQ=255)
                                                              gTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAgg                                       >  2:1965337/1‑100 (MQ=255)
                                                              gTCGGGGATGCGCGTGGTATTGGGGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAgg                                       >  2:345287/1‑100 (MQ=255)
                                                                   ggATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTg                                  <  1:2389024/100‑1 (MQ=255)
                                                                   ggATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTg                                  <  2:344965/100‑1 (MQ=255)
                                                                    gATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGc                                 <  2:1489530/100‑1 (MQ=255)
                                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                <  2:2253015/100‑1 (MQ=255)
                                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                <  2:846374/100‑1 (MQ=255)
                                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                <  2:3302079/100‑1 (MQ=255)
                                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                <  2:2753763/100‑1 (MQ=255)
                                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                <  1:645720/100‑1 (MQ=255)
                                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                <  2:1520233/100‑1 (MQ=255)
                                                                      tGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCat                               <  1:2836529/100‑1 (MQ=255)
                                                                        cgcgTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCatat                             >  1:1888416/1‑100 (MQ=255)
                                                                           gTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATccc                          <  2:74180/100‑1 (MQ=255)
                                                                              gTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCttt                       >  1:273780/1‑100 (MQ=255)
                                                                              gTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCttt                       <  1:139138/100‑1 (MQ=255)
                                                                               tATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGCGCATATCCCTTTa                      >  2:2160695/1‑100 (MQ=255)
                                                                                 ttGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTagc                    >  2:1954406/1‑98 (MQ=255)
                                                                                 ttGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTAcc                    <  2:2752045/100‑1 (MQ=255)
                                                                                 ttGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTAcc                    <  2:447935/100‑1 (MQ=255)
                                                                                      gtggtgAAAGCGCCTGAAGTTAACGGAACggcgctttcaccacaccaataccacgcgcatccccgacgctaatcacaataaatggcttgcctaaggtgat               <  1:1977131‑M2/100‑72 (MQ=255)
                                                                                        ggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAggg             >  2:1231074/1‑100 (MQ=255)
                                                                                         gtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAgggg            >  1:1407724/1‑100 (MQ=255)
                                                                                           gAAAGCGCCTGAAGTTAACGGAACggcgctttcaccacaccaataccacgcgcatccccgacgctaatcacaataaatggcttgcctaaggtgatatttg          <  1:255990‑M2/100‑77 (MQ=255)
                                                                                           gAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGAc          <  2:2424706/100‑1 (MQ=255)
                                                                                            aaaGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACt         <  2:1888423/100‑1 (MQ=255)
                                                                                             aaGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTg        <  2:1498436/100‑1 (MQ=255)
                                                                                              aGCGCCTGAAGTTAACGGAACggcgctttcaccacaccaataccacgcgcatccccgacgctaatcacaataaatggcttgcctaaggtgatatttggcg       <  1:2486913‑M2/100‑80 (MQ=255)
                                                                                              aGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTgg       >  1:524851/1‑100 (MQ=255)
                                                                                                cgcCgttccgttaacttcaggcgctttcaccacaccaataccacgcgcatccccgacgctaatcacaataaatggcttgcctaaggtgatatttggcgcg     >  2:3311677‑M1/1‑4 (MQ=255)
                                                                                                cgcCgttccgttaacttcaggcgctttcaccacaccaataccacgcgcatccccgacgctaatcacaataaatggcttgcctaaggtgatatttggcgcg     <  2:2301792‑M1/100‑97 (MQ=255)
                                                                                                cgcCTGAAGTTAACGGAACggcgctttcaccacaccaataccacgcgcatccacgacgctaatcacaataaatggcttgcctaaggtggtatttggcgcg     <  1:767429‑M2/100‑82 (MQ=255)
                                                                                                   cgttccgttaacttcaggcgctttcaccacaccaataccacgcgcctccccgacgctaatcacaattaatggcttgcctaaggtgatatttggcgcgttg  <  2:1419922‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
CGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAA  >  NC_000913/4638554‑4638752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.