BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4638653	131 (0.940)	4 (0.030)	4/166	NT	3.1%	coding (476/1353 nt)	creD	inner membrane protein
*	?	NC_000913	= 4638668	130 (1.000)	4 (0.030)	4/166	NT	3.1%	coding (491/1353 nt)	creD	inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 162 total aligned reads displayed.

CAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGC  >  NC_000913/4638570‑4638766

cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACg                                                                                                   <  1:3069390‑M2/100‑2 (MQ=255)

cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACg                                                                                                   >  1:1911559‑M2/1‑99 (MQ=255)

cAACGCGCCAAATATCACCTTAGGCAAGCCATTAATTGTGATTAGCGTCGGGGAGGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACg                                                                                                   <  2:1419922‑M2/100‑2 (MQ=255)

   cgcgCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACggcg                                                                                                >  2:3311677‑M2/1‑96 (MQ=255)

      gcCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTg                                                                                             <  2:3469150/100‑1 (MQ=255)

      gcCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTg                                                                                             >  2:229546/1‑100 (MQ=255)

       ccAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGa                                                                                            >  1:1149108/1‑100 (MQ=255)

        cAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCCCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAc                                                                                           <  2:3534305/100‑1 (MQ=255)

         aaaTATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAcc                                                                                          <  2:2657818/100‑1 (MQ=255)

         aaaTATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAcc                                                                                          <  1:266061/100‑1 (MQ=255)

          aaTATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCa                                                                                         <  1:443572/100‑1 (MQ=255)

           atatCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCAt                                                                                        <  2:1209761/100‑1 (MQ=255)

           atatCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCAt                                                                                        >  1:3707949/1‑100 (MQ=255)

            tatCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCAtt                                                                                       >  1:2254906/1‑100 (MQ=255)

            tatCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCAtt                                                                                       >  1:846369/1‑100 (MQ=255)

             atCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTg                                                                                      <  2:2410190/100‑1 (MQ=255)

             atCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTg                                                                                      <  2:251680/100‑1 (MQ=255)

             atCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTg                                                                                      <  2:2100959/100‑1 (MQ=255)

             atCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTg                                                                                      <  2:1465838/100‑1 (MQ=255)

               cACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCACTGACCATTGaa                                                                                    >  2:2113089/1‑100 (MQ=255)

                aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                                   >  1:3194640/1‑100 (MQ=255)

                aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                                   >  2:1286188/1‑100 (MQ=255)

                aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                                   >  1:1248905/1‑100 (MQ=255)

                aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                                   <  1:1297994/100‑1 (MQ=255)

                 ccTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAcc                                                                                  >  2:1833573/1‑100 (MQ=255)

                 ccTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAcc                                                                                  >  2:46430/1‑100 (MQ=255)

                  cTTAGGCAAGCCATTTATTGTGATTAGCGTCGTGGATGCGCGTTGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                                                   <  1:2258369/98‑1 (MQ=255)

                   ttAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCg                                                                                <  2:1013416/100‑1 (MQ=255)

                    tAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCgg                                                                               <  2:1149594/100‑1 (MQ=255)

                    tAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCgg                                                                               <  1:343282/100‑1 (MQ=255)

                      ggCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCa                                                                             >  1:3042587/1‑100 (MQ=255)

                      ggCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCa                                                                             >  1:3114895/1‑100 (MQ=255)

                        cAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCAcc                                                                           >  1:22453/1‑100 (MQ=255)

                          aGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCGGGCACCgg                                                                         >  2:2955173/1‑100 (MQ=255)

                          aGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCgg                                                                         >  1:1019784/1‑100 (MQ=255)

                          aGCCATTTATTGTGATTAGCGTCGGAGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGTCGCTGAGCATTGAACCCGGCACCgg                                                                         <  1:1719767/100‑1 (MQ=255)

                           gCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCggg                                                                        <  2:2475550/100‑1 (MQ=255)

                            ccATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGt                                                                       <  2:2341867/100‑1 (MQ=255)

                             cATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGt                                                                       >  2:1154931/1‑99 (MQ=255)

                              aTTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTa                                                                     <  1:2297092/100‑1 (MQ=255)

                                ttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTaga                                                                   <  1:2630402/100‑1 (MQ=255)

                                ttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTaga                                                                   <  2:219857/100‑1 (MQ=255)

                                 tATTGTGATTAGCTTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagag                                                                  <  1:91582/100‑1 (MQ=255)

                                 tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaat                                                                  <  2:255494/100‑5 (MQ=255)

                                 tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagag                                                                  >  2:2171970/1‑100 (MQ=255)

                                  aTTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaatg                                                                 <  2:673786/100‑6 (MQ=255)

                                  aTTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGCTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGc                                                                 >  1:1506772/1‑100 (MQ=255)

                                    tgtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaatg                                                                 <  2:3209997/98‑6 (MQ=255)

                                    tgtaATTGGCGTCGAGGATGCGCGTGGTATTGGTATGGTGAAAGAGACTGAAGTTAACGGAACGGCGCTGACCATTCAACCCGGCACCGGGTTagac                                                                  <  1:2932442/97‑2 (MQ=255)

                                     gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAg                                                              >  2:869452/1‑100 (MQ=255)

                                     gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAg                                                              >  1:1682673/1‑100 (MQ=255)

                                     gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCCGACCATTGAACCCGGCACCGGGTTAGAGCAAg                                                              >  1:1871039/1‑100 (MQ=255)

                                      tgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAgg                                                             <  2:1806198/100‑1 (MQ=255)

                                         ttAGCGTCGGGGATGCGCGTTGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCgg                                                          >  2:1693155/1‑100 (MQ=255)

                                          tAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCggg                                                         <  2:70676/100‑1 (MQ=255)

                                            gCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCa                                                       >  2:1673785/1‑100 (MQ=255)

                                              gTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAgg                                                     >  2:1965337/1‑100 (MQ=255)

                                              gTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAgg                                                     >  2:512878/1‑100 (MQ=255)

                                              gTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAgg                                                     <  2:2180553/100‑1 (MQ=255)

                                              gTCGGGGATGCGCGTGGTATTGGGGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAgg                                                     >  2:345287/1‑100 (MQ=255)

                                                    gATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGc                                               <  2:1489530/100‑1 (MQ=255)

                                                    gATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGc                                               <  2:3712583/100‑1 (MQ=255)

                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                              <  2:1924808/100‑1 (MQ=255)

                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                              <  2:2753763/100‑1 (MQ=255)

                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                              <  2:3302079/100‑1 (MQ=255)

                                                     aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                                              <  2:2253015/100‑1 (MQ=255)

                                                      tGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCat                                             <  1:2836529/100‑1 (MQ=255)

                                                        cgcgTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCatat                                           >  1:1888416/1‑100 (MQ=255)

                                                           gTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATccc                                        <  2:74180/100‑1 (MQ=255)

                                                              gTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCttt                                     <  1:139138/100‑1 (MQ=255)

                                                               tATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTa                                    >  2:3414004/1‑100 (MQ=255)

                                                                 ttGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTagc                                  >  2:1954406/1‑98 (MQ=255)

                                                                      gtggtgAAAGCGCCTGAAGTTAACGGAACggcgctttcaccacaccaataccacgcgcatccccgacgctaatcacaataaatggcttgcctaaggtgat                             <  1:1977131‑M2/100‑72 (MQ=255)

                                                                        ggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAggg                           >  2:275045/1‑100 (MQ=255)

                                                                           gAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGAc                        <  1:3503461/100‑1 (MQ=255)

                                                                             aaGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTg                      <  2:1498436/100‑1 (MQ=255)

                                                                              aGCGCCTGAAGTTAACGGAACggcgctttcaccacaccaataccacgcgcatccccgacgctaatcacaataaatggcttgcctaaggtgatatttggcg                     <  1:2486913‑M2/100‑80 (MQ=255)

                                                                              aGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTgg                     >  1:524851/1‑100 (MQ=255)

                                                                                cgcCTGAAGTTAACGGAACggcgctttcaccacaccaataccacgcgcatccacgacgctaatcacaataaatggcttgcctaaggtggtatttggcgcg                   <  1:767429‑M2/100‑82 (MQ=255)

                                                                                cgcCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCg                   <  2:3090943/100‑1 (MQ=255)

                                                                                    tGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGaa                <  1:2690737/99‑1 (MQ=255)

                                                                                    tGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCGTTACCTGAAGGGGACTGGCGGAAg               >  2:2794391/1‑100 (MQ=255)

                                                                                     gAAGTTAACGGAACGGCACTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGc              <  1:2113081/100‑1 (MQ=255)

                                                                                       aGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAg            >  2:2268210/1‑100 (MQ=255)

                                                                                       aGTTAACGGAACGGCGCTGACCAGTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAg            <  1:1734140/100‑1 (MQ=255)

                                                                                        gTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATGTCCCTTTACCTGAAGGGGACTGGCGGAAGCAGa           <  1:3299550/100‑1 (MQ=255)

                                                                                        gTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGa           >  1:727050/1‑100 (MQ=255)

                                                                                          tAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAAc         >  2:3241556/1‑100 (MQ=255)

                                                                                          tAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAAc         >  1:485844/1‑100 (MQ=255)

                                                                                          tAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAAc         >  2:2991273/1‑100 (MQ=255)

                                                                                          tAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAAc         <  2:1797122/100‑1 (MQ=255)

                                                                                            acggaacggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCt       >  2:298196/1‑100 (MQ=255)

                                                                                             cggaacggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTg      <  1:373146/100‑1 (MQ=255)

                                                                                             cggaacggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTg      <  2:377122/100‑1 (MQ=255)

                                                                                              ggaacggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGa     >  1:2742391/1‑100 (MQ=255)

                                                                                               gaacggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGaa    >  1:3068086/1‑100 (MQ=255)

                                                                                               gaacggCGCTGACCATCGAACCCGTCACCGGGTTAGAGCAAGGCGTGCAGGGCGCGCATATCCCTTTACCTGCAGGGGACTGGCGGAAGCAGACCTTGa     >  1:3131698/1‑99 (MQ=255)

                                                                                                 acggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGc  <  1:600475/100‑1 (MQ=255)

                                                                                                 acggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGc  <  1:2407886/100‑1 (MQ=255)

                                                                                                 acggCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGc  <  1:305872/100‑1 (MQ=255)

CAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGC  >  NC_000913/4638570‑4638766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.