| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 39151 = | NA (NA) | 9 (0.070) | 6/164 | NT | NA | noncoding (1/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 39181 = | NA (NA) | noncoding (31/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 222 total aligned reads displayed.
TACCGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGG > NC_000913/39052‑39250 | tACCGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGCAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTg > 1:2058529/1‑100 (MQ=255) cgctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGc < 1:2187881‑M1/2‑1 (MQ=255) gctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtaggcn > 2:3448184‑M1/98‑99 (MQ=255) gctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGcc > 2:3641490‑M1/98‑100 (MQ=255) gctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGcc > 2:1567622‑M1/98‑100 (MQ=255) ccGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGcc > 2:1624671/1‑100 (MQ=255) cGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCg > 2:902747/1‑100 (MQ=255) cGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCg < 2:2444420/100‑1 (MQ=255) ggAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCgg > 1:1119628/1‑100 (MQ=255) gggtggtggggtgctgaagcaataccggtaagtgcgtgcgctgcctgaggcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGa > 1:863524‑M1/95‑100 (MQ=255) gggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGa < 1:2909678‑M1/6‑1 (MQ=255) gggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGa > 2:353206‑M1/95‑100 (MQ=255) gagaAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGa < 1:1386135/100‑1 (MQ=255) aagaCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgc > 1:1782512/1‑100 (MQ=255) gaCAACGCGCCATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGGAAGATTTATGTAGCGCATGACTGCCGGATgcgg < 1:2499752/100‑1 (MQ=255) aCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcggc < 2:3718020/100‑1 (MQ=255) cAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcggcg < 2:1798989/100‑1 (MQ=255) cAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcggcg > 2:2237093/1‑100 (MQ=255) aaCGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGCATccggcag < 2:831074/100‑3 (MQ=255) cgcAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAAc < 1:1623994/100‑1 (MQ=255) cAATCCGGCTAACGGCACGAATTGCGGCATGGGTAGATGTTCCATTATTTGCTCCTGGATAATTTATGTAGCGCATGACTGCCGGATGCCGCGTAAACGc < 1:824664/100‑1 (MQ=38) aaTCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCt < 2:3334221/100‑1 (MQ=255) tCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCttt > 1:578281/1‑100 (MQ=255) ggCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATc > 2:3446767/1‑100 (MQ=255) ggCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATc > 1:2732524/1‑100 (MQ=255) gCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATcc > 2:3310781/1‑100 (MQ=255) gCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATcc > 2:3540007/1‑100 (MQ=255) accAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTCGCGCATGACTGACGGATGCAGCGTAAACGATTTATcc > 1:668137/2‑100 (MQ=255) cAACGGCCCGAATTTGGGCATGGGTAGATGATCCATTATTTGCTCCGGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCgg < 1:3674835/100‑1 (MQ=255) ccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGc > 1:3308029‑M1/71‑100 (MQ=255) aaCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGc < 2:2507355/100‑1 (MQ=255) aaCGGCCCCGATCTCGACATGGGTGAGTGACCCATTAGTTCCTCCTTAAAAAGTTATGCAGCGCATGACTGCCGGATGCGGCGTAAACTCGTTATCCGGc < 1:3050629/100‑1 (MQ=12) aCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGcc < 2:3034669/100‑1 (MQ=255) gctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCt > 1:1340180‑M1/69‑100 (MQ=255) ggCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTa < 2:3194885/100‑1 (MQ=255) ggCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTa < 1:237350/100‑1 (MQ=255) ctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCTa > 2:1120341‑M1/68‑100 (MQ=255) gCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTAc > 2:782007/1‑100 (MQ=255) cccGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACa > 2:2024385/1‑100 (MQ=255) ggccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACa > 1:500815‑M1/64‑98 (MQ=255) cGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACAtt > 1:2528320/1‑100 (MQ=255) cGAATTTCGGCATGGGTAGATGATAAATTATTTGCTCCTGAAAAATATATGTAGCGCATGACTGCCGGATGCGACGTAAACGCTTTATCCGGCCTACAtt > 1:3224712/1‑100 (MQ=37) aaTTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCg < 2:1449842/100‑1 (MQ=255) aaTTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCg < 1:2003224/100‑1 (MQ=255) aTTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGt < 2:2863127/100‑1 (MQ=255) tttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTg < 2:508354/100‑1 (MQ=255) tttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTg < 2:2750713/100‑1 (MQ=255) tttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTg < 2:3784988/100‑1 (MQ=255) ttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGc < 1:3783550/100‑1 (MQ=255) ttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGc < 2:1457266/100‑1 (MQ=255) tGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTa < 1:2837609/100‑1 (MQ=255) gggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAg > 2:1381890/1‑100 (MQ=255) ggTAGGTGAAACATCATTTGCTCCTGAAAACTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATGCGGCCTACATTCGTGCTCCCGTAgg > 1:1929135/1‑100 (MQ=37) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCGCGTAgg > 1:2251900/1‑100 (MQ=255) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg > 1:1364872/1‑100 (MQ=255) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg > 2:2980776/1‑100 (MQ=255) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg < 2:1531032/100‑1 (MQ=255) tAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGcc > 1:3543711/1‑100 (MQ=255) tAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGcc > 1:2297359/1‑100 (MQ=255) gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCt > 1:1580772/1‑99 (MQ=255) atgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGa < 2:2754206/100‑1 (MQ=255) tgatCAACTATATGCTCCTGAAAATATTATGTAGCGCATGACTCCCGGATGCGGAATAAAAGCTTTAACCGGCCTACCTTCATGCTCCCGTAAACCTGAt < 1:2460282/100‑1 (MQ=255) gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa > 1:1029930/1‑100 (MQ=255) gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa > 1:3477409/1‑100 (MQ=255) gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa > 1:1903531/1‑100 (MQ=255) atCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATaa < 1:1936186/100‑1 (MQ=255) tCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAg < 2:1942572/100‑1 (MQ=255) tCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAg < 2:890574/100‑1 (MQ=255) cATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc < 1:546923/100‑1 (MQ=255) attattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACg > 2:3417173/1‑100 (MQ=255) tttGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATc > 2:2660667/1‑100 (MQ=255) tGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAg > 2:12971/1‑100 (MQ=255) tGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAg < 2:2801518/100‑1 (MQ=255) gCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGc > 1:1396728/1‑100 (MQ=255) cTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCTGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCg < 1:1174157/100‑1 (MQ=255) ccTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTc > 2:804228/1‑100 (MQ=255) ccTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTc < 1:1097951/100‑1 (MQ=255) ccTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTc > 1:3652158/1‑100 (MQ=255) cTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCg > 2:2215148/1‑100 (MQ=255) cTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTACGCCTGATAAGACGCATCAGCGTCg > 1:1665724/1‑100 (MQ=255) tGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGc < 2:1548454/100‑1 (MQ=255) gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCa < 2:593720/100‑1 (MQ=255) gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCa > 2:3619806/1‑100 (MQ=255) aaaTTTATGTAGCGCATGACTGCTGGATGCGGCGTAATCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATc < 1:2929162/99‑1 (MQ=255) tttATGTATCGCATGAATGCTGGAGGCTGCGTAAACGCTTTAGCCGGTCTACATCCGTGCTCCCGGAGGCCTGATAGTACGCAGCAGCGTCGCATCAGGc < 1:775556/100‑1 (MQ=21) gTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgc > 2:259532/1‑100 (MQ=255) tAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCa < 2:651994/100‑1 (MQ=255) gcgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACg > 1:187870/1‑100 (MQ=255) cgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACgg < 2:2131139/100‑1 (MQ=255) cgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACgg < 1:130019/100‑1 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc < 1:621026/100‑1 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc < 2:1660644/100‑1 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc < 1:3406205/100‑1 (MQ=255) tGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt > 2:966534/1‑100 (MQ=255) tGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt > 1:828326/1‑100 (MQ=255) tGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt > 2:2826808/1‑100 (MQ=255) gACTGCCGGATGCGGCGTAAACGCTTGATCCGGCCTACAGTCGTGCTGCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt < 1:3111094/99‑1 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCTTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg > 1:3488996‑M1/1‑100 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg > 2:3245326‑M1/1‑100 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg < 2:3126400‑M1/100‑1 (MQ=255) | TACCGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGG > NC_000913/39052‑39250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |