BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2393130	NA (NA)	6 (0.050)	6/164	NT	NA	intergenic (‑89/+75)	nuoM/nuoL	NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
*	?	NC_000913	= 2393162	NA (NA)	6 (0.050)	6/164	NT	NA	noncoding (32/36 nt)	REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 177 total aligned reads displayed.

TAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCC  >  NC_000913/2393033‑2393229

tagtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgt                                                                                                   >  1:2271555‑M1/1‑98 (MQ=255)

 agtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtc                                                                                                  >  2:2806562‑M1/1‑97 (MQ=255)

 agtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtc                                                                                                  <  2:1385155‑M1/100‑4 (MQ=255)

   taACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgg                                                                                                >  2:1082436‑M1/1‑95 (MQ=255)

    aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgga                                                                                               <  1:3102896‑M1/100‑7 (MQ=255)

    aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgga                                                                                               >  1:425756‑M1/1‑94 (MQ=255)

     aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggat                                                                                              <  1:1495458‑M1/100‑8 (MQ=255)

     aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggat                                                                                              <  1:1620690‑M1/100‑8 (MQ=255)

         ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAc                                                                                          <  1:2089866/100‑1 (MQ=255)

          gCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                                                         <  1:1014559/100‑1 (MQ=255)

           cGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcg                                                                                        <  1:1039674/100‑1 (MQ=255)

           cGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcg                                                                                        >  1:573335/1‑100 (MQ=255)

            gATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcgc                                                                                       <  1:2368470/100‑1 (MQ=255)

              tCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGa                                                                                     >  2:1768545/1‑100 (MQ=255)

              tCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGa                                                                                     <  1:740347/100‑1 (MQ=255)

                tttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAg                                                                                   <  1:1527074/100‑1 (MQ=255)

                 ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAg                                                                                   >  2:238202/1‑99 (MQ=255)

                    ttCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcgg                                                                               <  1:3348636/100‑1 (MQ=255)

                    ttCCTTGTAAAAGTCACGTCACGACCGAATTTTCAAAGAATTCTCACGTCGGAAAATTCTCTTCGGAGTGGGGGTAGTGTCGGATGCACCGCGAAggcgg                                                                               <  1:671313/100‑1 (MQ=255)

                     tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  2:1908879/100‑1 (MQ=255)

                     tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  1:2542589/100‑1 (MQ=255)

                     tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  1:31854/100‑1 (MQ=255)

                      ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                             <  2:233785/100‑1 (MQ=255)

                       cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCtt                                                                            <  1:2968011/100‑1 (MQ=255)

                          gTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATC                                                                         <  2:2287914‑M2/100‑1 (MQ=255)

                          gTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGAAGTGTCGGATGCACCGCGAAGGCGGCTTATC                                                                         <  2:2287089‑M2/100‑1 (MQ=255)

                            aaaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCG                                                                       <  2:595667‑M2/100‑1 (MQ=255)

                             aaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAACATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGA                                                                      <  2:2893888‑M2/100‑1 (MQ=255)

                               aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                                    <  1:789462/100‑1 (MQ=255)

                               aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAC                                                                     >  1:3155013‑M2/1‑99 (MQ=255)

                                gTCCCGTCAGGTCTGGATTTTCAACGTATTCTCACGACAGAAATTTCTCTTCGGACTGGGGGTAGTgtcggataagccgcgttcgcggtgcatccgacac                                                                   <  1:821419‑M1/100‑35 (MQ=255)

                                gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                   >  2:1318599/1‑100 (MQ=255)

                                gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                   >  2:1041186/1‑100 (MQ=255)

                                  cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTAc                                                                 >  2:2120640/1‑100 (MQ=255)

                                   ccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACg                                                                <  2:3000815/100‑1 (MQ=255)

                                   ccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACg                                                                <  1:1171599/100‑1 (MQ=255)

                                   ccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACg                                                                >  2:748517/1‑100 (MQ=255)

                                     gTCAGGACCGGATTTTCAACGAATTCTCACGACAGCAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                              >  1:3194079/1‑100 (MQ=255)

                                     gTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgacactaccc                                                              <  2:3626043‑M1/100‑40 (MQ=255)

                                         ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  2:2201277/100‑1 (MQ=255)

                                         ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  2:2249876/100‑1 (MQ=255)

                                           aCCGGATTTGCAACGAATTCTCACTACAGAAAATTCTCTTCGGACTGTGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                                         <  1:2655786/99‑1 (MQ=255)

                                            ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                       >  1:2876402/1‑100 (MQ=255)

                                            ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTATTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                       >  2:2671003/1‑100 (MQ=255)

                                               gATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcc                                                    <  2:3456582/100‑1 (MQ=255)

                                                aTTTTCAACGAATTCTCACGACAGACAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                     <  1:418735/98‑1 (MQ=255)

                                                  tttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAg                                                 >  2:1179333/1‑100 (MQ=255)

                                                   ttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                                                >  1:1422538/1‑100 (MQ=255)

                                                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGTATGCACCACGACGGCGGCTTATCCCAGactaaccccagtccgacgagaa                                               <  1:1370517‑M2/99‑23 (MQ=255)

                                                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                              <  1:3799135/100‑1 (MQ=255)

                                                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                              <  1:1274054/100‑1 (MQ=255)

                                                      aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcccctgggc                                             <  1:3080279/100‑7 (MQ=255)

                                                      aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                             <  2:1302975/100‑1 (MQ=255)

                                                       aCGGATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                              <  1:1844044/98‑1 (MQ=255)

                                                          aaTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATc                                         <  1:3415596/100‑1 (MQ=255)

                                                           aTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATcc                                        <  1:1970100/100‑1 (MQ=255)

                                                            ttCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATccc                                       <  2:3183350/100‑1 (MQ=255)

                                                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     <  2:573338/100‑1 (MQ=255)

                                                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     <  2:354406/100‑1 (MQ=255)

                                                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGCCTGCACTGCGAAGACGGCTCATTCGACCTACGTTCTTATCTGCCCCGCGGCAATcc                                        >  1:3703/1‑97 (MQ=255)

                                                                cACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACaa                                   <  2:1036022/100‑1 (MQ=255)

                                                                cACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCAGACCTACGTTCTTATATGCCCAGGGGCAATCCCACaa                                   >  2:815481/1‑100 (MQ=255)

                                                                 aCGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAAt                                  <  2:3636913/100‑1 (MQ=255)

                                                                   gACATAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc                                <  1:730361/100‑1 (MQ=255)

                                                                    aaaGAAAATTCTCGTCGGACTGGGGGTAGTGCCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCt                               >  2:2557222/3‑100 (MQ=255)

                                                                       gAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                            >  2:1621251/1‑100 (MQ=255)

                                                                       gAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                            >  2:304759/1‑100 (MQ=255)

                                                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           >  1:170038/1‑100 (MQ=255)

                                                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  2:706265/100‑1 (MQ=255)

                                                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  1:441024/100‑1 (MQ=255)

                                                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           >  1:64917/1‑100 (MQ=255)

                                                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  1:146386/100‑1 (MQ=255)

                                                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  2:132785/100‑1 (MQ=255)

                                                                         aaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACt                          >  1:280665/1‑100 (MQ=255)

                                                                          aaTTCTCTTCGCACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAACTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                            <  1:506042/97‑1 (MQ=255)

                                                                           aTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCa                        >  1:2205373/1‑100 (MQ=255)

                                                                           aTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCa                        <  2:393374/100‑1 (MQ=255)

                                                                             tctcTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGTAATCCCACAATCCTTAACTCAAc                      <  1:1082431/100‑1 (MQ=255)

                                                                             tctcTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAAc                      >  1:1632377/1‑100 (MQ=255)

                                                                              ctctTCGGACTGGGGGTAGTGTCGGATGCACCGCCAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACg                     <  2:3229514/100‑1 (MQ=255)

                                                                                ctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCa                   >  1:1288227/1‑100 (MQ=255)

                                                                                 ttCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAg                  <  2:468991/100‑1 (MQ=255)

                                                                                 ttCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAg                  <  1:1705540/100‑1 (MQ=255)

                                                                                  tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                 >  2:3729434/1‑100 (MQ=255)

                                                                                   cGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTa                <  2:2317343/100‑1 (MQ=255)

                                                                                   cGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTa                >  2:2073550/1‑100 (MQ=255)

                                                                                      aCTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCa             >  2:2396990/1‑100 (MQ=255)

                                                                                       cTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCAt            <  2:44801/100‑1 (MQ=255)

                                                                                         gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          >  2:2450412/1‑100 (MQ=255)

                                                                                         gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          >  2:556680/1‑100 (MQ=255)

                                                                                         gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          <  2:389601/100‑1 (MQ=255)

                                                                                         gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          <  1:2421164/100‑1 (MQ=255)

                                                                                          ggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCGAGGGGCAATCACACAATCCTTAACTCAACGCAGTACCAtaa          <  1:2261345/99‑3 (MQ=255)

                                                                                            ggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtcctgacg       <  2:3490217‑M2/100‑63 (MQ=255)

                                                                                            ggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACa       <  2:1706560/100‑1 (MQ=255)

                                                                                             gTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAg      <  2:1876159/100‑1 (MQ=255)

                                                                                               aGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtacagacggga    <  1:2090270‑M2/100‑66 (MQ=255)

                                                                                                gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGc   <  1:2330881/100‑1 (MQ=255)

                                                                                                gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGc   <  1:2083268/100‑1 (MQ=255)

                                                                                                 tgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGcc  <  2:1043104/100‑1 (MQ=255)

TAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCC  >  NC_000913/2393033‑2393229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.