New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2617968 =NA (NA)3 (0.020) 3/164 NT NA noncoding (1/37 nt) REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2618001 = NA (NA)noncoding (34/37 nt) REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 186 total aligned reads displayed.

ATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAAC  >  NC_000913/2617869‑2618067
                                                                                                   |                                                                                                   
 ttGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGc                                                                                                    <  2:2741860/100‑1 (MQ=255)
 gtgaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGc                                                                                                    <  2:503647‑M1/2‑1 (MQ=255)
  tgaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGcc                                                                                                   <  2:1780022‑M1/3‑1 (MQ=255)
  tgaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGcc                                                                                                   <  2:21122‑M1/3‑1 (MQ=255)
   gtgGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCg                                                                                                  >  2:3387486/1‑100 (MQ=255)
   gaaaggaattctgaagttgtagataaggtgtttattgtcggatggggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCg                                                                                                  >  1:1605446‑M1/97‑100 (MQ=255)
   gaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCg                                                                                                  <  2:3460481‑M1/4‑1 (MQ=255)
   gaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCg                                                                                                  <  1:2713053‑M1/4‑1 (MQ=255)
   gaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCg                                                                                                  <  1:2669672‑M1/4‑1 (MQ=255)
   gaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCg                                                                                                  <  2:1994649‑M1/4‑1 (MQ=255)
   gaaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCg                                                                                                  <  1:2926277‑M1/4‑1 (MQ=255)
    tgGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCgg                                                                                                 <  1:3386265/100‑1 (MQ=255)
    tgGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCgg                                                                                                 <  1:1116258/100‑1 (MQ=255)
    aaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCgg                                                                                                 >  2:361123‑M1/96‑100 (MQ=255)
    aaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCgg                                                                                                 >  1:1743400‑M1/96‑100 (MQ=255)
    aaagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCg                                                                                                  <  1:2001537‑M1/4‑1 (MQ=255)
     aagaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccataatattcgtagGCCGGa                                                                                                <  2:3737513‑M1/6‑1 (MQ=255)
      agaaattctgaagttgtagataaggtgtttattgtcgtatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCGGAt                                                                                               <  2:2661378‑M1/7‑1 (MQ=255)
      agaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCGGAt                                                                                               <  2:1018100‑M1/7‑1 (MQ=255)
      agaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCGGAt                                                                                               <  2:3008796‑M1/7‑1 (MQ=255)
      agaaattctgaagttgtagataaggtgtttattgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCGGAt                                                                                               >  1:1060505‑M1/94‑100 (MQ=255)
              tGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCt                                                                                       >  1:974589/1‑100 (MQ=255)
              tGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCCAGTTGAAGCACATTGCCGGATGCGACGCt                                                                                       >  1:992787/1‑100 (MQ=255)
              tGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGGTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATTCGACGCt                                                                                       >  1:2532934/1‑100 (MQ=255)
                  aaaGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGcc                                                                                   <  1:1093562/100‑1 (MQ=255)
                   aaGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCa                                                                                  <  2:3432263/100‑1 (MQ=255)
                    aGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCAc                                                                                 >  2:2934384/1‑100 (MQ=255)
                     gcgcGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACg                                                                                <  1:1978412/100‑1 (MQ=255)
                      ngcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGt                                                                               >  1:3737484/2‑100 (MQ=255)
                      cgcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGATAAGATGTGCTCCATCCCTCGTAGAATCACCTTGCCGGATGCGACGCTTGCCACGt                                                                               >  1:621509/1‑100 (MQ=255)
                          gATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCtt                                                                            >  2:3566425/1‑99 (MQ=255)
                              ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                                                       >  2:3157838/1‑100 (MQ=255)
                              ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                                                       >  1:956089/1‑100 (MQ=255)
                              ggTCGTCCACAGGAGCAGGCACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTCGATGAAGAGCAGTGCCGTATGCGACGCTTGCCACGTCTTATCCg                                                                       >  1:969198/1‑100 (MQ=255)
                               gtcgtcCACCGGAGCAGGTACTGGTAATCGTGGGTGAAGACGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCgg                                                                      <  1:497477/100‑1 (MQ=255)
                               gtcgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCgg                                                                      >  2:2837159/1‑100 (MQ=255)
                               gtcgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCgg                                                                      >  2:302056/1‑100 (MQ=255)
                               gtcgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCgg                                                                      >  1:1035744/1‑100 (MQ=255)
                                 cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                    <  1:2757203/100‑1 (MQ=255)
                                 cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                    >  2:561966/1‑100 (MQ=255)
                                 agtcCACCGGAGCAGGGACTGGAAATCGTGGGTTAAGATGGGCTCGATGCCTAGTTGAAGTAGATTGATGGATGTGACGCTTGCCAGGTCTTATcc                                                                        >  1:3220085/2‑96 (MQ=255)
                                     cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCTACGCTTGCCACGTCTTATCCGGCCTACg                                                                <  1:978823/100‑1 (MQ=255)
                                     cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACg                                                                >  1:1874003/1‑100 (MQ=255)
                                       gtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGaa                                                              >  1:2956096‑M1/61‑100 (MQ=255)
                                         ggAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATa                                                            >  1:716073/1‑100 (MQ=255)
                                         ggAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATa                                                            <  1:14315/100‑1 (MQ=255)
                                          gAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATAc                                                           <  2:1051806/100‑1 (MQ=255)
                                            gCAGGTACTGGAACTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACTAATACt                                                          >  1:450388/1‑99 (MQ=255)
                                              aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCATATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                                                       <  1:2119166/100‑1 (MQ=255)
                                              aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                                                       <  2:2775952/100‑1 (MQ=255)
                                               ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                      >  1:1236992/1‑100 (MQ=255)
                                                gaaCTGGAAATCGATGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCCGATACGACGATTACCGAGTATTATCCGACATACGCATa                                                            >  1:3675098/3‑93 (MQ=255)
                                                 tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                    >  1:161785/1‑100 (MQ=255)
                                                 tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                    >  2:1565169/1‑100 (MQ=255)
                                                   cTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTa                                                  >  1:2597812/1‑100 (MQ=255)
                                                    tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                                 >  2:1156190/1‑100 (MQ=255)
                                                     ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                <  2:380537/100‑1 (MQ=255)
                                                     ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                >  1:900131/1‑100 (MQ=255)
                                                     ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                >  2:3792367/1‑100 (MQ=255)
                                                     ggAAATCGTGGGTTAAGATGTACTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                <  2:1212742/100‑1 (MQ=255)
                                                         aTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcg                                            <  1:3768033/100‑1 (MQ=255)
                                                          tCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgc                                           <  2:116238/100‑1 (MQ=255)
                                                           cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                          <  2:2801596/100‑1 (MQ=255)
                                                            gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                         <  2:2272591/100‑1 (MQ=255)
                                                            gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                         >  1:3699687/1‑100 (MQ=255)
                                                              gggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAg                                       >  1:1018095/1‑100 (MQ=255)
                                                               ggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGt                                      >  1:2463871/1‑100 (MQ=255)
                                                                 ttAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTc                                    <  2:1451590/100‑1 (MQ=255)
                                                                  tAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCg                                   >  1:390005/1‑100 (MQ=255)
                                                                   aaGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCgg                                  <  2:2363944/100‑1 (MQ=255)
                                                                   aaGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCgg                                  >  2:2594436/1‑100 (MQ=255)
                                                                    aaatatgCTCCATCTCTATTTGAAGCACATTGCCGTATGCGACGCTTGCCACGTCTTATCCTGCCTACGAATACTATGGATTAACTTCGCGTAGTTCgg                                  <  1:3161962/94‑1 (MQ=255)
                                                                    aGATGTGCTCCATCGCTAGTTGAAGCACATTGCCTGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCCCGTAGTTCGGa                                 <  1:1997536/100‑1 (MQ=255)
                                                                     gATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAt                                >  1:2026756/1‑100 (MQ=255)
                                                                      aTGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                               <  1:3519538/100‑1 (MQ=255)
                                                                        gtgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAg                             <  2:843406/100‑1 (MQ=255)
                                                                         tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                            <  2:1716507/100‑1 (MQ=255)
                                                                         tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                            <  2:347490/100‑1 (MQ=255)
                                                                         tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                            >  1:3598523/1‑100 (MQ=255)
                                                                           cTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                          <  2:3703714/100‑1 (MQ=255)
                                                                           cTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                          <  2:648520/100‑1 (MQ=255)
                                                                            tCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGt                         >  1:436792/1‑100 (MQ=255)
                                                                               aTCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcg                      >  2:743290/1‑100 (MQ=255)
                                                                                tCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgc                     >  2:1743753/1‑100 (MQ=255)
                                                                                 cGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgcg                    >  2:1111650/1‑100 (MQ=255)
                                                                                 cGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgcg                    <  1:159284/100‑1 (MQ=255)
                                                                                  gCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTTCGAATACTATGGCTTCACTTCGCGTAGTTCGGATAAGGCGTCcgc                     >  1:1586772/1‑98 (MQ=37)
                                                                                  gCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCgcgc                   >  2:3514938/1‑100 (MQ=255)
                                                                                       ttGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCAt              >  2:2083431/1‑100 (MQ=255)
                                                                                       ttGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCAt              >  2:1973611/1‑100 (MQ=255)
                                                                                        tGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGACTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATc             >  1:2486280/1‑100 (MQ=255)
                                                                                         gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATcc            <  1:2859001/100‑1 (MQ=255)
                                                                                           aGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGa          >  1:2843801/1‑100 (MQ=255)
                                                                                           aGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGa          >  2:3657943/1‑100 (MQ=255)
                                                                                             cacaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACa        <  1:835589/100‑1 (MQ=255)
                                                                                              acaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACaa       <  1:2198106/100‑1 (MQ=255)
                                                                                               caTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACaa       >  1:2641533/1‑99 (MQ=255)
                                                                                               caTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAt      >  2:3199048/1‑100 (MQ=255)
                                                                                                aTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATa     <  2:3371306/100‑1 (MQ=255)
                                                                                                   GCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAac  <  1:3472493‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAAC  >  NC_000913/2617869‑2618067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.