New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2617968 =NA (NA)3 (0.020) 3/164 NT NA noncoding (1/37 nt) REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2618001 = NA (NA)noncoding (34/37 nt) REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 165 total aligned reads displayed.

CGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCAC  >  NC_000913/2617902‑2618098
                                                                                                   |                                                                                                 
tttattgtcggatgcggcgcgaacgccttatccgaattacgcgaagttaatccatagtattcgtagGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                                                   >  1:2092071‑M1/67‑100 (MQ=255)
cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                                                   <  1:2757203/100‑1 (MQ=255)
cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                                                   >  2:561966/1‑100 (MQ=255)
    cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCTACGCTTGCCACGTCTTATCCGGCCTACg                                                                                               <  1:978823/100‑1 (MQ=255)
      gtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGaa                                                                                             >  1:2956096‑M1/61‑100 (MQ=255)
        ggAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATa                                                                                           >  1:716073/1‑100 (MQ=255)
         gAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATAc                                                                                          <  1:2314265/100‑1 (MQ=255)
           gCAGGTACTGGAACTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACTAATACt                                                                                         >  1:450388/1‑99 (MQ=255)
             aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCATATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                                                                                      <  1:2119166/100‑1 (MQ=255)
             aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                                                                                      <  2:2775952/100‑1 (MQ=255)
              ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                                                     <  2:2894311/100‑1 (MQ=255)
              ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGCTGAAGCACATTGCCGGATGCGACGCATGCCCCGTCTTATCCGGCCTACGAATACTATgg                                                                                     >  1:362000/1‑100 (MQ=255)
                tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                                                   <  2:2784636/100‑1 (MQ=255)
                tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                                                   >  1:161785/1‑100 (MQ=255)
                  cTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTa                                                                                 >  2:2407230/1‑100 (MQ=255)
                   tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                                                                >  2:1156190/1‑100 (MQ=255)
                   tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                                                                >  2:3614683/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               >  2:3792367/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               <  2:380537/100‑1 (MQ=255)
                        aTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcg                                                                           <  1:3768033/100‑1 (MQ=255)
                        aTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcg                                                                           <  2:809154/100‑1 (MQ=255)
                         tCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgc                                                                          <  2:116238/100‑1 (MQ=255)
                          cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                                                         <  2:1094855/100‑1 (MQ=255)
                          cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                                                         >  1:937797/1‑100 (MQ=255)
                          cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                                                         <  1:1882719/100‑1 (MQ=255)
                          cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgc                                                                          >  2:3378017/1‑99 (MQ=255)
                           gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                                                        >  1:3684476/1‑100 (MQ=255)
                           gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                                                        <  2:2272591/100‑1 (MQ=255)
                             gggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAg                                                                      >  1:1018095/1‑100 (MQ=255)
                                ttAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTc                                                                   <  2:1451590/100‑1 (MQ=255)
                                 tAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCg                                                                  >  1:390005/1‑100 (MQ=255)
                                  aaGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCgg                                                                 >  2:2594436/1‑100 (MQ=255)
                                   aaatatgCTCCATCTCTATTTGAAGCACATTGCCGTATGCGACGCTTGCCACGTCTTATCCTGCCTACGAATACTATGGATTAACTTCGCGTAGTTCgg                                                                 <  1:3161962/94‑1 (MQ=255)
                                   aGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGa                                                                >  2:1317594/1‑100 (MQ=255)
                                    gATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAt                                                               >  1:2026756/1‑100 (MQ=255)
                                    gATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAt                                                               >  1:5785/1‑100 (MQ=255)
                                       gtgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAg                                                            <  1:3226495/100‑1 (MQ=255)
                                       gtgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAg                                                            <  2:1208899/100‑1 (MQ=255)
                                        tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                                                           <  2:1716507/100‑1 (MQ=255)
                                        tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                                                           <  2:347490/100‑1 (MQ=255)
                                        tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                                                           >  2:3435155/1‑100 (MQ=255)
                                        tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                                                           >  1:3598523/1‑100 (MQ=255)
                                          cTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                                                         <  2:652738/100‑1 (MQ=255)
                                          cTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                                                         >  1:1994642/1‑100 (MQ=255)
                                          cTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                                                         <  2:3703714/100‑1 (MQ=255)
                                             cATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTc                                                      <  1:2615388/100‑1 (MQ=255)
                                              aTCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcg                                                     >  1:3503464/1‑100 (MQ=255)
                                               tCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgc                                                    >  1:1162323/1‑100 (MQ=255)
                                                cGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgcg                                                   >  2:1473383/1‑100 (MQ=255)
                                                cGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgcg                                                   >  2:1111650/1‑100 (MQ=255)
                                                 gCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTTCGAATACTATGGCTTCACTTCGCGTAGTTCGGATAAGGCGTCcgc                                                    >  1:1586772/1‑98 (MQ=37)
                                                 gCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCgcgc                                                  >  2:3514938/1‑100 (MQ=255)
                                                  cTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgcc                                                 >  2:3330811/1‑100 (MQ=255)
                                                    aGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccgc                                               >  2:1010208/1‑100 (MQ=255)
                                                      ttGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCAt                                             >  2:1973611/1‑100 (MQ=255)
                                                       tGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATc                                            >  2:2346152/1‑100 (MQ=255)
                                                       tGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGACTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATc                                            >  1:2486280/1‑100 (MQ=255)
                                                        gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATcc                                           <  1:2859001/100‑1 (MQ=255)
                                                        gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATcc                                           <  1:390687/100‑1 (MQ=255)
                                                         aaGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCg                                          >  2:1769821/1‑100 (MQ=255)
                                                           gCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc                                        <  2:2077692/100‑1 (MQ=255)
                                                           gCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAGTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc                                        <  2:1728865/100‑1 (MQ=255)
                                                            cacaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACa                                       <  1:3765380/100‑1 (MQ=255)
                                                            cacaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACa                                       <  1:835589/100‑1 (MQ=255)
                                                             acaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACaa                                      <  1:2198106/100‑1 (MQ=255)
                                                              caTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACaa                                      >  1:2641533/1‑99 (MQ=255)
                                                              caTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAt                                     <  1:3033897/100‑1 (MQ=255)
                                                              caTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAt                                     >  2:3199048/1‑100 (MQ=255)
                                                               aTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATa                                    >  1:1098865/1‑100 (MQ=255)
                                                                  gccggataagacgtggcaagcgtcgcatccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGACGTTCGCGCCGCATCCGACAATacac                                 >  1:2465069‑M2/34‑100 (MQ=255)
                                                                  GCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAac                                 <  1:3472493‑M1/100‑1 (MQ=255)
                                                                      GATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACAcc                              >  2:3219198‑M1/1‑99 (MQ=255)
                                                                      GATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCt                             <  2:3663397‑M1/100‑1 (MQ=255)
                                                                           gACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCt                        >  1:3344850/1‑100 (MQ=255)
                                                                             cGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTAc                      >  2:3403934/1‑100 (MQ=255)
                                                                              gCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACa                     <  1:1532395/100‑1 (MQ=255)
                                                                                  gCCACGTATTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACtt                 >  1:2778613/1‑100 (MQ=255)
                                                                                   ccACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTc                >  2:3073891/1‑100 (MQ=255)
                                                                                    cACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCa               <  1:851501/100‑1 (MQ=255)
                                                                                    cACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCa               <  2:691357/100‑1 (MQ=255)
                                                                                        tCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGAATAAAACATTCGCGCCACATCCAACAATAAACACCTTATATACAACTTCaaaa            >  1:1348895/1‑99 (MQ=255)
                                                                                         cTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtt          <  1:2270015/100‑1 (MQ=255)
                                                                                         cTTATCCGGCCTACGAATACTATGGATTAAATACGCGTAGTTCGGATAAGGCGTTCGCACCGAATAAGAAAATAAACACCTTATCTACAACATCAGAAtt          >  1:525581/1‑100 (MQ=255)
                                                                                            atccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttct       >  1:1060505‑M2/8‑100 (MQ=255)
                                                                                            atccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttct       <  2:3008796‑M2/93‑1 (MQ=255)
                                                                                            atccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttct       <  1:2735684‑M2/93‑1 (MQ=255)
                                                                                            atccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATACGACAATAAACACCTTATCTACAACTTCAGAAtttct       <  2:2661378‑M2/93‑1 (MQ=255)
                                                                                             tccggcCTACGAATATTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctt      <  2:3737513‑M2/94‑1 (MQ=255)
                                                                                              ccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt     >  2:361123‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctt      >  2:1025479‑M2/6‑99 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc    <  2:3460481‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc    <  2:1994649‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc    <  1:2926277‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc    <  1:2669672‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt     <  1:2001537‑M2/95‑1 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCCCATCCGACAATAAACACCTTATCTACAACTTCAGAAttcctttc    >  1:1605446‑M2/5‑100 (MQ=255)
                                                                                                ggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTca   <  2:21122‑M2/97‑1 (MQ=255)
                                                                                                ggCCTACGAGTACTATGGATTAACTCCGCGTAATTCTGATAACCCGTACGCGCCGCATCCGACAATAAACACCTTCCCCACAACTCCCGAATTTCTTTca   <  1:170922/100‑1 (MQ=255)
                                                                                                 ncCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGAATCCGACAATAATCACCTTATCTACTACTTCAGCAtttcttt     >  1:1801273‑M2/3‑97 (MQ=255)
                                                                                                 gcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTcac  <  2:503647‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
CGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCAC  >  NC_000913/2617902‑2618098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.