New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2835118NA (NA)12 (0.090) 6/164 NT NA noncoding (52/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4317999 NA (NA)noncoding (83/83 nt) REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 235 total aligned reads displayed.

CGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTCCACCACTTG  >  NC_000913/4317900‑4318098
                                                                                                   |                                                                                                   
cgcgTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                                                     <  1:269710/100‑1 (MQ=18)
cGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                                                     >  1:961671‑M2/1‑100 (MQ=255)
 gCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcc                                                                                                    <  1:1367349/100‑2 (MQ=18)
 gCCTCGTGGTTCGGGTGTCGGATGCGACACTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                                                    >  1:156610/1‑100 (MQ=255)
   cTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAcc                                                                                                  >  2:286530/1‑100 (MQ=255)
     cGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCgg                                                                                                <  2:3773730/100‑1 (MQ=255)
      gTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGc                                                                                               <  1:1951611/100‑1 (MQ=255)
       tGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCAGCACCGGCt                                                                                              >  1:3424071/1‑100 (MQ=255)
        ggTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTCCGCCGCATCCGGCACCGGCTc                                                                                             <  1:834090/100‑1 (MQ=255)
          ttCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCaa                                                                                           <  2:3626048/100‑1 (MQ=255)
          ttCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCaa                                                                                           >  1:487539/1‑100 (MQ=255)
           tCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAAt                                                                                          <  2:2075243/100‑1 (MQ=255)
           tCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAAt                                                                                          >  1:2000098/1‑100 (MQ=255)
            cGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAAtt                                                                                         >  2:3342559/1‑100 (MQ=255)
             gggTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTc                                                                                        >  2:3698694/1‑100 (MQ=255)
              ggTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCt                                                                                       >  1:1522326/1‑100 (MQ=255)
               gtgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCGTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                                                                      <  1:3104104/100‑1 (MQ=255)
               gtgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                                                                      <  2:3521887/100‑1 (MQ=255)
               gtgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                                                                      <  2:63680/100‑1 (MQ=255)
                tgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGGGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc                                                                                     <  2:3248008/100‑1 (MQ=255)
                ggtcggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc                                                                                     >  1:3676988‑M2/34‑100 (MQ=255)
                 GTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGGGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc                                                                                     <  1:1972448‑M1/99‑1 (MQ=255)
                    ggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCaaaa                                                                                 >  1:806840‑M2/30‑100 (MQ=255)
                    ggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATCGGTAGGCCGGATCAGGCCTCTACGCCGCATCCGGCACCGGCTCAATTCTGCaa                                                                                   >  1:2639808‑M2/30‑98 (MQ=255)
                    GGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCaaaa                                                                                 <  1:1855115‑M1/100‑1 (MQ=255)
                     gataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAAc                                                                                >  1:125127‑M2/29‑100 (MQ=255)
                     gataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCACCCGGCACCGGCTCAATTCTGCAAAAc                                                                                >  2:3580696‑M2/29‑100 (MQ=255)
                         cGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGAt                                                                            >  1:1776900/1‑100 (MQ=255)
                          gACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATg                                                                           <  1:2092303/100‑1 (MQ=255)
                           aCGCTGACGCGTCTTATCCGACCTACGGGGAGCGCCTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAACCCGATGa                                                                          >  1:630961/1‑100 (MQ=255)
                             gCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGaca                                                                        >  2:130573/1‑100 (MQ=255)
                              cTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGacac                                                                       <  2:3443896/100‑1 (MQ=255)
                                 aCGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACcag                                                                    >  2:1175922/1‑100 (MQ=255)
                                  cgcgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACcagc                                                                   >  1:200225/1‑100 (MQ=255)
                                  cgcgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACcagc                                                                   <  1:3606238/100‑1 (MQ=255)
                                       cTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtg                                                              >  1:1679180/1‑100 (MQ=255)
                                        ttATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgt                                                             >  2:2679620/1‑100 (MQ=255)
                                         tATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgtg                                                            <  1:3503256/100‑1 (MQ=255)
                                         tATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgtg                                                            >  2:2153863/1‑100 (MQ=255)
                                         tATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgtg                                                            <  2:405761/100‑1 (MQ=255)
                                          atccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTgtgt                                                           >  2:2798919‑M2/8‑100 (MQ=255)
                                            ccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGtat                                                         <  1:576969‑M2/95‑1 (MQ=255)
                                            ccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGtat                                                         <  1:785469‑M2/95‑1 (MQ=255)
                                              ggcCTACGGGGGGCGCATTGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgtg                                                            <  1:925730‑M2/92‑1 (MQ=255)
                                                cCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACg                                                      <  1:2299262‑M2/98‑1 (MQ=255)
                                                 cTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGga                                                    <  2:437051/100‑1 (MQ=255)
                                                  tACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGgat                                                   <  2:2535187/100‑1 (MQ=255)
                                                  tACGGGGAGCGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGgat                                                   <  1:231403/100‑1 (MQ=255)
                                                   aCGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACg                                                      <  1:3121455/96‑1 (MQ=255)
                                                    cGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGGCGCATCCGGCAGCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGgat                                                   <  1:2324361/98‑1 (MQ=255)
                                                        gAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCg                                             <  2:2807790/100‑1 (MQ=255)
                                                          gcgcATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCggg                                           >  1:919624/1‑100 (MQ=255)
                                                          gcgcATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCggg                                           <  2:517706/100‑1 (MQ=255)
                                                           cgcATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCgg                                            >  1:1128112/1‑98 (MQ=255)
                                                           cgcATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGgt                                          <  1:3771739/100‑1 (MQ=255)
                                                              aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGgtcgt                                       >  2:2643656/1‑100 (MQ=255)
                                                                ttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCCATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGgtcgtcn                                     <  1:3195673/100‑2 (MQ=255)
                                                                ttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGtcgtcg                                     <  2:3023863/100‑1 (MQ=255)
                                                                  gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAg                                   >  1:3470929/1‑100 (MQ=255)
                                                                  gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAg                                   <  2:610824/100‑1 (MQ=255)
                                                                   tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGc                                  <  2:3118007/100‑1 (MQ=255)
                                                                    aGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtag                                 <  2:2613273‑M2/100‑69 (MQ=255)
                                                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagc                                <  1:1170450‑M2/100‑70 (MQ=255)
                                                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagc                                <  2:149445‑M2/100‑70 (MQ=255)
                                                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCAc                                >  2:1798343/1‑100 (MQ=255)
                                                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCAc                                >  2:8205/1‑100 (MQ=255)
                                                                      gCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcctcccacattttaggcccagtagc                                <  1:298133‑M2/99‑70 (MQ=255)
                                                                       ccGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTTGAGCAcgc                              <  2:2961395/100‑1 (MQ=255)
                                                                       ccGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCAcgc                              >  2:2202743/1‑100 (MQ=255)
                                                                              aGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggtcggt                       <  2:2326143/100‑1 (MQ=255)
                                                                              aGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggtcggt                       >  2:753269/1‑100 (MQ=255)
                                                                              aGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGGCGTCGAGCACGcggtcgg                        >  1:2553853/1‑99 (MQ=255)
                                                                               ggCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggtcggt                       <  2:3197275/99‑1 (MQ=255)
                                                                               ggCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggtcg                         >  1:2141538/1‑97 (MQ=255)
                                                                               ggCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTGGGtt                      >  1:2513453/1‑100 (MQ=255)
                                                                                gCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTa                     >  2:2446610/1‑100 (MQ=255)
                                                                                 cGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTaa                    >  2:1101323/1‑100 (MQ=255)
                                                                                  gTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAAc                   >  2:1439398/1‑100 (MQ=255)
                                                                                   tttACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAAcc                  <  2:1138301/100‑1 (MQ=255)
                                                                                   tttACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAAcc                  <  2:711374/100‑1 (MQ=255)
                                                                                    ttACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAAccc                 <  1:28477/100‑1 (MQ=255)
                                                                                      aCGCCGCATCCGGCACCGGCTCAAGTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCAc               <  2:1027408/100‑1 (MQ=255)
                                                                                       cgccgcATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCAct              <  2:2799502/100‑1 (MQ=255)
                                                                                        gccgcATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCActc             >  2:104165/1‑100 (MQ=255)
                                                                                         ccgcATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCActct            <  2:272902/100‑1 (MQ=255)
                                                                                           gcATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTcc          <  2:3543247/100‑1 (MQ=255)
                                                                                            tacccagcctacacatgcgtccccgtaggtcggataagacgcgccagcctcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttc         >  2:943976‑M2/4‑8 (MQ=255)
                                                                                            cATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTcca         <  2:193918/100‑1 (MQ=255)
                                                                                            cATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTcca         <  1:2179537/100‑1 (MQ=255)
                                                                                             aTCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTccac        <  2:850168/100‑1 (MQ=255)
                                                                                              tCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaa       >  2:2318679‑M2/1‑6 (MQ=255)
                                                                                              tCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTAAACCCACTCTccacc       >  1:898915/1‑100 (MQ=255)
                                                                                              tCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGGCGAGCACGCCCGCGGTTAACCCACtctc           >  1:3252327/1‑96 (MQ=255)
                                                                                               ccGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTccacca      >  2:650460/1‑100 (MQ=255)
                                                                                                cGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaaca     <  2:3595133‑M2/100‑97 (MQ=255)
                                                                                                 ggCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaacaa    <  2:953504‑M2/100‑98 (MQ=255)
                                                                                                 ggCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTCCACCACt    <  1:1453506/100‑1 (MQ=255)
                                                                                                  gCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaacaat   <  2:106231‑M2/100‑99 (MQ=255)
                                                                                                   cctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaaccatc  <  2:896762‑M2/100‑100 (MQ=255)
                                                                                                   cACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTCCACCACTTg  <  1:2399828/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTCCACCACTTG  >  NC_000913/4317900‑4318098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.