New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3619655 =	NA (NA)	7 (0.050)	6/168	NT	100%	coding (464/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3619677 =	0 (0.000)					coding (486/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCG  >  NC_000913/3619578‑3619776                                                                                                    |                                                                                                    aaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccag                                                                                                     >  2:2610823‑M2/100‑100 (MQ=255) aaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccag                                                                                                     <  2:1570133‑M2/1‑1 (MQ=255) aaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccag                                                                                                     >  1:36340‑M2/100‑100 (MQ=255) aaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccag                                                                                                     >  1:3102237‑M2/100‑100 (MQ=255) aaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccag                                                                                                     >  2:476116‑M2/100‑100 (MQ=255) aaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagagcctgccagagtgaggccag                                                                                                     <  1:562042‑M2/1‑1 (MQ=255)  accgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGc                                                                                                    <  1:396148‑M2/2‑1 (MQ=255)  accgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGc                                                                                                    >  2:3398732‑M2/99‑100 (MQ=255)  accgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGc                                                                                                    >  1:1574867‑M2/99‑100 (MQ=255)   ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   <  2:3215537‑M2/3‑1 (MQ=255)   ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   <  1:2377807‑M2/3‑1 (MQ=255)   ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   >  2:2792791‑M2/98‑100 (MQ=255)   ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   >  1:3733782‑M2/98‑100 (MQ=255)   ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   >  2:3532265‑M2/98‑100 (MQ=255)   ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   <  2:1916554‑M2/3‑1 (MQ=255)   ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   <  1:1531832‑M2/3‑1 (MQ=255)    cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc                                                                                                   <  1:1203069‑M2/3‑1 (MQ=255)    cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCg                                                                                                  <  2:3641675‑M2/4‑1 (MQ=255)    cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagcgcggccaGCCg                                                                                                  >  1:1137630‑M2/97‑100 (MQ=255)     nagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg                                                                                                 >  2:3779038‑M2/96‑100 (MQ=255)     gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg                                                                                                 >  2:1777966‑M2/96‑100 (MQ=255)     gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg                                                                                                 >  2:1825039‑M2/96‑100 (MQ=255)     gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg                                                                                                 <  2:491897‑M2/5‑1 (MQ=255)      agcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg                                                                                                 >  1:3177184‑M2/95‑99 (MQ=255)                                                                     tcttccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgct                                 >  2:3108323‑M2/32‑100 (MQ=255)                                                                      cttccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgctg                                >  1:1573950‑M2/31‑100 (MQ=255)                                                                       ttccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgct                                 >  1:1856810‑M2/30‑98 (MQ=255)                                                                        tccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgctgct                              >  2:2195322‑M2/29‑100 (MQ=255)                                                                        tccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgctgc                               >  1:1180137‑M2/29‑99 (MQ=255)                                                                         ccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTc                             >  2:3431884‑M2/28‑100 (MQ=255)                                                                           ggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCgg                           >  2:1718421‑M2/26‑100 (MQ=255)                                                                                                 gccGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGaa     <  2:2875065‑M2/97‑1 (MQ=255)                                                                                                    GCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCg  <  2:2266426‑M2/100‑1 (MQ=255)                                                                                                    GCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCg  <  2:1633382‑M2/100‑1 (MQ=255)                                                                                                    GCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCg  <  1:200810‑M2/100‑1 (MQ=255)                                                                                                    GCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCg  <  1:1736011‑M2/100‑1 (MQ=255)                                                                                                    GCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCg  >  2:574008‑M2/1‑100 (MQ=255)                                                                                                    GCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTGGGTGTGAGCGGGTGCCGGAAGCg  <  1:1938945‑M2/100‑1 (MQ=255)                                                                                                    |                                                                                                    TGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCG  >  NC_000913/3619578‑3619776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.