BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4266888 =	NA (NA)	7 (0.050)	6/164	NT	NA	noncoding (1/97 nt)	RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	4266918 =	NA (NA)	7 (0.050)	6/164	NT	NA	noncoding (31/97 nt)	RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 177 total aligned reads displayed.

TACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTG  >  NC_000913/4266819‑4267017

taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                                                     <  1:3514745/100‑1 (MQ=255)

taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                                                     <  1:2001056/100‑1 (MQ=255)

taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                                                     <  1:1081760/100‑1 (MQ=255)

taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                                                     <  2:1915073/100‑1 (MQ=255)

 cgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCa                                                                                                    >  1:1033766‑M1/69‑100 (MQ=255)

 aCGCGCCTGATTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGAGGCGTGAATGCCTTATCCGGcc                                                                                                     >  1:1544912/1‑99 (MQ=255)

 aCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTGTCCGGCCa                                                                                                    <  1:1280360/100‑1 (MQ=255)

  cgcgCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCaa                                                                                                   >  1:1118241/1‑100 (MQ=255)

  cgcgCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCa                                                                                                    <  1:63707/99‑1 (MQ=255)

    cgcCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATa                                                                                                 <  2:2343835/100‑1 (MQ=255)

    cgcCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCAGTACCGGATGCGGCGTGAATGCCTTATCCGGCCaa                                                                                                   >  2:1773999/1‑98 (MQ=255)

      ccTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaaa                                                                                               >  2:2693562/1‑100 (MQ=255)

          aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                                                           <  1:1008267/100‑1 (MQ=255)

           cTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCt                                                                                          >  1:402999/1‑100 (MQ=255)

           cTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCt                                                                                          >  1:1655862/1‑100 (MQ=255)

            ttCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTa                                                                                         >  2:348581/1‑100 (MQ=255)

             tCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaa                                                                                        >  2:26875/1‑100 (MQ=255)

             tCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaa                                                                                        <  1:2365471/100‑1 (MQ=255)

                 gggTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAAt                                                                                    <  1:2611145/100‑1 (MQ=255)

                   gTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAAtt                                                                                   >  2:1199385/1‑99 (MQ=255)

                   gTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTc                                                                                  <  2:3106740/100‑1 (MQ=255)

                    tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                                                 <  1:1899374/100‑1 (MQ=255)

                     cgcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATTAGGCCAATAAAATCCTAAAAAtt                                                                                   >  1:3547708/1‑97 (MQ=255)

                     cgcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCAGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                                                 <  1:3540719/99‑1 (MQ=255)

                      gcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTc                                                                                  <  1:2843417/97‑1 (MQ=255)

                         aTGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAg                                                                            <  2:470552/100‑1 (MQ=255)

                          tGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGt                                                                           <  1:1814791/100‑1 (MQ=255)

                           gAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGtt                                                                          <  2:3496520/100‑1 (MQ=255)

                           gAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGtt                                                                          <  1:112056/100‑1 (MQ=255)

                               tgcGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATg                                                                      <  1:777277/98‑1 (MQ=255)

                               tACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATg                                                                      <  2:3556744/100‑1 (MQ=255)

                                 cGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGtt                                                                    >  2:674929/1‑100 (MQ=255)

                                       ttAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCa                                                              <  1:1342596/100‑1 (MQ=255)

                                         aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCTGCCAATAAAATTCTAAAAATTCAGTCAGTTGATGTTTTTTCATg                                                            >  1:2398843/1‑100 (MQ=38)

                                         aaTCGCCCTGTAATATTTGACTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                                                            <  2:2459665/100‑1 (MQ=255)

                                          aTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGc                                                           <  2:207830/100‑1 (MQ=255)

                                           tCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGct                                                          >  1:3248289/1‑100 (MQ=255)

                                            cGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctc                                                         >  1:856319/1‑100 (MQ=255)

                                            cGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctc                                                         >  2:2260269/1‑100 (MQ=255)

                                            cGTTCTGTAATATTTGATTGTCTGTGACGAATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                                                            <  1:1036620/97‑1 (MQ=255)

                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  1:411973/100‑1 (MQ=255)

                                              ttCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCtt                                                       <  2:3291211/100‑1 (MQ=255)

                                               tCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                                                      <  2:3143548/100‑1 (MQ=255)

                                               tCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                                                      <  2:2906778/100‑1 (MQ=255)

                                                cTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCCATAAGTTGATGTTCTTTCATGCTCTtat                                                     >  2:1943311/1‑100 (MQ=255)

                                                cTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtat                                                     >  1:2337174/1‑100 (MQ=255)

                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                                                    <  1:3059629/100‑1 (MQ=255)

                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                                                    <  2:2466488/100‑1 (MQ=255)

                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                                                    <  2:1400789/100‑1 (MQ=255)

                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtat                                                     <  1:1961418/99‑1 (MQ=255)

                                                  ggaaTATTTGATTGTCTGTGCCGGAGGCGGCGTGCATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTCCATGCTCTTATaa                                                   <  1:3158855/98‑1 (MQ=39)

                                                  gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                                                   >  1:2167091/1‑100 (MQ=255)

                                                     atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                                                >  1:3006780/1‑100 (MQ=255)

                                                      tatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGt                                               >  2:107985/1‑100 (MQ=255)

                                                      tatTTGATTGTCGGTGCCGGGTGCGGCGTGAATGCGTTATCCTGCCAATAAAATCCTAAAGATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAAGt                                               >  1:1693004/1‑100 (MQ=255)

                                                        tttGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCg                                             >  2:2951106/1‑100 (MQ=255)

                                                        taggattttattggccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCg                                             >  2:195950‑M2/44‑100 (MQ=255)

                                                           gATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGc                                          <  2:75296/100‑1 (MQ=255)

                                                            aTTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGcc                                         <  2:345534/100‑1 (MQ=255)

                                                            aTTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGcc                                         <  2:665678/100‑1 (MQ=255)

                                                            aTTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGcc                                         <  1:1746974/100‑1 (MQ=255)

                                                             ttttattggccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCct                                        >  1:2692271‑M2/39‑100 (MQ=255)

                                                              tGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCCATAAGTTGATCTTCTTTCATGCTCTTATAAAGGTCGTGccgc                                       <  2:2568513/100‑3 (MQ=255)

                                                              tGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctc                                       <  2:2072033/100‑1 (MQ=255)

                                                                 cTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCTAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctct                                      >  1:147120/1‑98 (MQ=255)

                                                                 cTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTgg                                    <  2:3629499/100‑1 (MQ=255)

                                                                  tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc                                   <  2:394589/100‑1 (MQ=255)

                                                                  tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc                                   <  1:604614/100‑1 (MQ=255)

                                                                    tgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGGTGTTCTTTCGTGCTCTTATAAAGGTCGTGCCTCTTGCgg                                 >  2:172068/1‑100 (MQ=255)

                                                                     GCCGGATGCGGGGTGAATGCCTTATCCGGCCAATAAAATCCTAATAAGTCAGTAAGTTGATGCTCTTTCATGCTCTTATAAAGATCGTGCCACTGGCgg                                 <  1:1840286‑M1/99‑1 (MQ=255)

                                                                     GCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGa                                >  1:1212497‑M1/1‑100 (MQ=255)

                                                                      ccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGAt                               >  2:2949565‑M2/30‑100 (MQ=255)

                                                                      CCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGAt                               >  1:2826154‑M1/1‑100 (MQ=255)

                                                                         GATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTa                            >  1:706708‑M1/1‑100 (MQ=255)

                                                                           TGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACg                          >  2:2796709‑M1/1‑100 (MQ=255)

                                                                             cggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTTTTATAAAGGTCGTGCCTCTGGCGGATGTACGtt                        >  1:345773/1‑100 (MQ=255)

                                                                              ggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGttt                       >  2:2537857/1‑100 (MQ=255)

                                                                              ggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGttt                       >  2:371059/1‑100 (MQ=255)

                                                                               gcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTg                      <  2:1820923/100‑1 (MQ=255)

                                                                                cgTGAATGCCTTATCCGGCCAATAAAGTCGTAAAAATTGAATAAGTTGATGTTCTTTCATGCGCTTATACAGGTCGTGCCTCTGGCGGATGTACGTTTg                      <  1:1610612/99‑1 (MQ=255)

                                                                                cgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGt                     >  1:1390878/1‑100 (MQ=255)

                                                                                cgTGAATGCCTTATCCGGCAAAGAAAATCCTAAAACTGCAATAAGTTAGTGTTATTTCATGCGCTTATAAAGTTAGTGTCTCTGACGGCTGTACGTTTg                      >  1:748881/1‑99 (MQ=255)

                                                                                  tGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTTAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCa                   <  2:2143927/100‑1 (MQ=255)

                                                                                    aaTGCCTTATGCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATg                 <  1:589170/100‑1 (MQ=255)

                                                                                    aaTGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATg                 <  1:13710/100‑1 (MQ=255)

                                                                                     aTGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGa                >  2:1511201/1‑100 (MQ=255)

                                                                                      tGCCTTATCCTGCCAATAAAATCCTAATATTTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAg               <  2:1429548/100‑1 (MQ=255)

                                                                                      tGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAg               <  2:3322927/100‑1 (MQ=255)

                                                                                      tGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTAGTGCCTCTGGCGGATGTACGTTTGTCATGAg               >  2:3775616/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGtc             <  2:2012763/100‑1 (MQ=255)

                                                                                          ttATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGtctc           <  2:1074213/100‑1 (MQ=255)

                                                                                           tATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCa          >  1:3344715/1‑100 (MQ=255)

                                                                                            atccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCAc         <  2:1281050‑M2/93‑1 (MQ=255)

                                                                                             tccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCTTGCCACTGGCGGATGTACGTTTGTCATGAGTCtcaat        >  1:1797087‑M2/7‑98 (MQ=255)

                                                                                              ccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCActc       >  2:2479139‑M2/6‑100 (MQ=255)

                                                                                              ccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCActc       >  1:3644682‑M2/6‑100 (MQ=255)

                                                                                               cGGCCAATACAATCATAAAAAGTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCATTCCTCTGGCGGATGTACGTTTGTCATGAGAGCCActct      >  1:3758655/1‑100 (MQ=255)

                                                                                                 gcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGt    <  2:26027‑M2/98‑1 (MQ=255)

                                                                                                  cCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGtt   <  2:2426800‑M2/99‑1 (MQ=255)

                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTACATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTg  >  1:2016148/1‑100 (MQ=255)

TACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTG  >  NC_000913/4266819‑4267017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.