BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_000913	1,978,503	Δ776 bp	100%		insB1–insA	insB1, insA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1978503–1979270	1979278	9–776	121 [0]	[0] 121	insB1–insA	insB1, insA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1978502	0 (0.000)	104 (0.820)	69/162	NT	100%	intergenic (‑305/+16)	flhD/insB1	flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
*	?	NC_000913	1979279 =	0 (0.000)	104 (0.820)	69/162	NT	100%	intergenic (‑64/‑474)	insA/uspC	IS1 repressor TnpA/universal stress protein

Only 100 of 121 total aligned reads displayed.

GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGT  >  NC_000913/1979181‑1979378

gtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgta                                                                                                    <  2:171026‑M2/2‑1 (MQ=255)

 tactcgtcactacacgcacatacaacggaggggtgctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgtat                                                                                                   <  1:3369389‑M2/3‑1 (MQ=255)

   ctcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                 >  2:1976491‑M2/96‑100 (MQ=255)

     cgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGt                                                                                               >  2:325960‑M2/94‑100 (MQ=255)

     cgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGt                                                                                               >  2:1713605‑M2/94‑100 (MQ=255)

        cactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCAt                                                                                            >  2:1229671‑M2/91‑100 (MQ=255)

         actacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATa                                                                                           >  2:1795363‑M2/90‑100 (MQ=255)

          ctacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATAc                                                                                          >  2:2393914‑M2/89‑100 (MQ=255)

            acacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACtt                                                                                        >  2:3065323‑M2/87‑100 (MQ=255)

            acacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACtt                                                                                        >  2:2632146‑M2/87‑100 (MQ=255)

             cacgcacatacaacggaggggggctgcgattttcaatactgcgtgatgcagctcccacaaaacactcaattacttaacataaatgTATAAGTCATACttt                                                                                       >  1:1107940‑M2/86‑100 (MQ=255)

             cacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttt                                                                                       <  2:138739‑M2/15‑1 (MQ=255)

              acgcacatacaacggagcggggctgcgatcttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttt                                                                                       <  2:3695842‑M2/15‑1 (MQ=255)

               cgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                     <  1:642740‑M2/17‑1 (MQ=255)

               cgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                     <  1:3569594‑M2/17‑1 (MQ=255)

               cgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                     >  2:1893982‑M2/84‑100 (MQ=255)

               cgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                     >  1:315866‑M2/84‑100 (MQ=255)

               cgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                     <  2:220029‑M2/17‑1 (MQ=255)

               cgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                     <  1:1826827‑M2/17‑1 (MQ=255)

                 cacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtt                                                                                   <  2:2360596‑M2/19‑1 (MQ=255)

                  acatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttt                                                                                  <  1:2802908‑M2/20‑1 (MQ=255)

                    atacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttttg                                                                                <  1:608172‑M2/22‑1 (MQ=255)

                     tacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTgg                                                                               >  1:2643795‑M2/78‑100 (MQ=255)

                     tacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTgg                                                                               >  1:3436931‑M2/78‑100 (MQ=255)

                      acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTggg                                                                              <  2:1472271‑M2/24‑1 (MQ=255)

                       caacggaggggggctgcgcttttcaatactgcgtgatgcagatcacccaaaacactcaattacttaacataaatgTATAAGTCATACttttgtttt                                                                                 >  1:1305919‑M2/76‑96 (MQ=255)

                       caacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgt                                                                             >  1:1601703‑M2/76‑100 (MQ=255)

                       caacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgt                                                                             >  1:2974781‑M2/76‑100 (MQ=255)

                       caacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgt                                                                             >  2:1733731‑M2/76‑100 (MQ=255)

                       caacggaggggggctgcgattttaaataatgcgttatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgt                                                                             <  1:3478737‑M2/25‑1 (MQ=255)

                       caaaggaggggggccgcgcttttcaataatgcgtgatgcagatcacgcaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgt                                                                             >  1:2600135‑M2/76‑100 (MQ=255)

                        aacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgtg                                                                            <  1:1374499‑M2/26‑1 (MQ=255)

                        aacggaggggggctacgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgtg                                                                            <  1:1495789‑M2/26‑1 (MQ=255)

                              ggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTc                                                                      <  2:1386137‑M2/32‑1 (MQ=255)

                                ggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCaa                                                                    >  1:839945‑M2/67‑100 (MQ=255)

                                ggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCaa                                                                    <  1:505809‑M2/34‑1 (MQ=255)

                                  ggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATc                                                                  <  1:1549751‑M2/36‑1 (MQ=255)

                                  ggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATc                                                                  >  2:3650770‑M2/65‑100 (MQ=255)

                                  ggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATc                                                                  >  1:1558769‑M2/65‑100 (MQ=255)

                                   gctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCt                                                                 <  2:1949748‑M2/37‑1 (MQ=255)

                                    ctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTg                                                                >  1:1621175‑M2/63‑100 (MQ=255)

                                    ctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTg                                                                >  1:1433179‑M2/63‑100 (MQ=255)

                                    ctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTg                                                                >  1:191621‑M2/63‑100 (MQ=255)

                                     tgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTg                                                                <  1:777871‑M2/38‑1 (MQ=255)

                                      gcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGt                                                               >  1:3544295‑M2/61‑99 (MQ=255)

                                       cgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTa                                                             <  2:3428806‑M2/41‑1 (MQ=255)

                                          ttttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaa                                                          <  2:1081983‑M2/44‑1 (MQ=255)

                                           tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                         <  1:3620218‑M2/45‑1 (MQ=255)

                                           tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                         >  2:2182784‑M2/56‑100 (MQ=255)

                                           tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTGTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                         >  1:2134087‑M2/56‑100 (MQ=255)

                                              caataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGtt                                                      >  1:1911382‑M2/53‑100 (MQ=255)

                                              caataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGtt                                                      <  1:2415659‑M2/48‑1 (MQ=255)

                                               aataatgcgtgatgcagatcacacaaaacactcaattacttaacatatatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttt                                                     <  1:3675557‑M2/49‑1 (MQ=255)

                                               aataatgcgtgatgcagatcacacaaaacactcaattacgtaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttt                                                     <  1:325350‑M2/49‑1 (MQ=255)

                                               aataatgcgtgatgcagatcacacaaaacaatcaattacttaacataaatgTATAAGTAATACTTTTGTTTTGTGTGTATTTCAATCTGTTAAAAAGttt                                                     >  1:854637‑M2/52‑100 (MQ=255)

                                                  aatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTc                                                  <  1:990043‑M2/52‑1 (MQ=255)

                                                  aatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTc                                                  <  2:1733663‑M2/52‑1 (MQ=255)

                                                    tgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgc                                                <  1:319059‑M2/54‑1 (MQ=255)

                                                    tgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgc                                                <  1:1961352‑M2/54‑1 (MQ=255)

                                                     gcgtaatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgct                                               >  1:280570‑M2/46‑100 (MQ=255)

                                                         gatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgc                                           >  2:822148‑M2/42‑100 (MQ=255)

                                                          atgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgct                                          >  2:1848129‑M2/41‑100 (MQ=255)

                                                           tgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTgttaaaaagtttttttttttttt                                          >  1:1144902‑M2/40‑90 (MQ=255)

                                                           tgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgcta                                         >  2:3584180‑M2/40‑100 (MQ=255)

                                                            gcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTTGGTGTATTTCAATATGTTAAAAGGTTTTTcgctacgcta                                         >  1:1621127‑M2/39‑99 (MQ=255)

                                                             cagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagc                                       >  2:252774‑M2/38‑100 (MQ=255)

                                                              agatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGCTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagca                                      >  1:1453528‑M2/37‑100 (MQ=255)

                                                               gatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaa                                     <  1:2047355‑M2/65‑1 (MQ=255)

                                                                atcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaag                                    <  1:2427868‑M2/66‑1 (MQ=255)

                                                                 tcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaagc                                   >  2:819877‑M2/34‑100 (MQ=255)

                                                                 tcaaacaaaacactcgatttcttaacataaatgTATAATTCATACTTTTGTCTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaag                                    <  1:722753‑M2/66‑1 (MQ=255)

                                                                  cacacaaaacactcaattacttaacataaatgTCTAAGTCATACTTTAGTTTTGGGTGTATTTAAATCTGTTAAAAAGTTTTTAGATACGCtatcaat                                    >  1:1709311‑M2/33‑97 (MQ=255)

                                                                  cacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaagca                                  <  1:182969‑M2/68‑1 (MQ=255)

                                                                   acacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAgcaagcaa                                 >  1:1166147‑M2/32‑100 (MQ=255)

                                                                    cacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCaaa                                >  2:935174‑M2/31‑100 (MQ=255)

                                                                       aaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAAt                             >  2:1409270‑M2/28‑100 (MQ=255)

                                                                       aaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAAt                             >  1:2611101‑M2/28‑100 (MQ=255)

                                                                        aaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATg                            <  1:2550027‑M2/74‑1 (MQ=255)

                                                                        aaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATg                            >  1:2134992‑M2/27‑100 (MQ=255)

                                                                          acactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGaa                          <  2:49533‑M2/76‑1 (MQ=255)

                                                                           cactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGaaa                         <  2:2165235‑M2/77‑1 (MQ=255)

                                                                            actcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAAc                        <  1:3341218‑M2/78‑1 (MQ=255)

                                                                               caattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAgg                     <  1:1048503‑M2/81‑1 (MQ=255)

                                                                               caattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAgg                     >  2:1273576‑M2/20‑100 (MQ=255)

                                                                               caattacttaacataaatgTATAAGTCATACTTTTGTTTTGGATGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAgg                     >  1:2763629‑M2/20‑100 (MQ=255)

                                                                               caattacttaacataaatgTATAAGTCATACTGTTGTTTTGGGGGTATTTCAATTTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAgg                     <  1:2437209‑M2/81‑1 (MQ=255)

                                                                                aattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCATAAATGAAACAgg                     <  2:2489541‑M2/81‑1 (MQ=255)

                                                                                   tacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                 >  2:2898272‑M2/16‑100 (MQ=255)

                                                                                   tacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                 >  2:1191530‑M2/16‑100 (MQ=255)

                                                                                   tacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                 >  1:3295567‑M2/16‑100 (MQ=255)

                                                                                    acttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaataa                >  1:3432162‑M2/15‑100 (MQ=255)

                                                                                    acttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAAACTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaataa                <  1:2318776‑M2/86‑1 (MQ=255)

                                                                                       taacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTATCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCg             >  1:2670586‑M2/12‑100 (MQ=255)

                                                                                         acataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaa           <  2:3151416‑M2/91‑1 (MQ=255)

                                                                                          nataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaaa          >  2:946167‑M2/9‑100 (MQ=255)

                                                                                          cataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAATCAAAAATGAAACAGGAATAATCGaaa          <  2:2310492‑M2/92‑1 (MQ=255)

                                                                                          cataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaaa          >  2:1076554‑M2/9‑100 (MQ=255)

                                                                                            taaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATg        >  2:1858049‑M2/7‑100 (MQ=255)

                                                                                                tgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGa     >  1:103384‑M2/3‑99 (MQ=255)

                                                                                                  tataAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGt  >  2:390585/1‑100 (MQ=255)

GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGT  >  NC_000913/1979181‑1979378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`