| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 786696 = | NA (NA) | 7 (0.050) | 5/166 | NT | NA | intergenic (+11/+147) | aroG/gpmA | 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, phenylalanine repressible/phosphoglyceromutase 1 |
| ? | NC_000913 | 786726 = | NA (NA) | intergenic (+41/+117) | aroG/gpmA | 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, phenylalanine repressible/phosphoglyceromutase 1 | |||||
GCTTTTTTGTTGCTAACAATGGAGCACATTGCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/786799‑786696‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgaTGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGCTTTCT > NC_000913/786726‑786823 GCTTTTTTGTTGCTAACAATGGAGCACATTGCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCTGATACGCCACTCTGACGGCGCAT < 2:750231/100‑1GCTTTTTTGTTGCTAACAATGGAGCACATTGCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCAT > 1:3487312/1‑100 CTTTTTTGTTGCTAACAATGGAGCACATTGCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATC > 1:2876055/1‑100 TTCATCGGATACGCCACTCTGACGGCGCATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAAC > 1:223709/1‑100 TCATCGGATACGCCACTCTGACGGCGCATCCGATGAATCACCACAAGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACA > 1:2251805/1‑100 CATCGGATACGCCACTCTGACGGCGCATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAA > 1:1646974/1‑100 CATCGGATACGCCACTCTGACGGCGCATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAA > 1:360124/1‑100 CATCGGATACGCCACTCTGACGGCGAATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAA > 2:803145/1‑100 ATCGGATACGCCACTCTGACGGCGCATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAA > 1:683827/1‑100 CGGATACGCCACTCTGACGGCGCATACGATGAATCACAACAAGCCTGATACGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAA > 2:1750781/1‑100 ATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGATCCATTGTTAGCAAAAAAAAAGCCGACTCACTTGCAGTCGGCT > 1:1576176/1‑100 ATCCGATCAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGCT > 1:2051701/1‑100 TCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGat > 2:1406249/1‑97 CCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGCTTT > 2:1096069/1‑100 CGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGCTTTC > 2:3343729/1‑100 CGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGCTTTC > 2:755527/1‑100 CGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGAAACAAAAAAGCCGACTCACTTGCAGTCGGCTTTC > 1:2028299/1‑100 CGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTATTAGCAACAAAAAAGCCAACTCACTTGCAGTAGACTTTC > 1:3270800/1‑100 CGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTACATTATTAGCAAAAAAAAAGCAGACTCACTTGCAGTCGGCTTTC > 1:993296/1‑100 CGATGAATCACCACAGGCCTGATAAGTCGCGCAGCATCGCATCAGGCAATGGGCTCCATTGGTAGCAACAAAAAAGCGGACTCACTTGAAGTCGGGTT > 2:2677840/1‑98 GATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGCTTTCT < 1:2859550/100‑1 GCTTTTTTGTTGCTAACAATGGAGCACATTGCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/786799‑786696‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgaTGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCAATGTGCTCCATTGTTAGCAACAAAAAAGCCGACTCACTTGCAGTCGGCTTTCT > NC_000913/786726‑786823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |