New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2539674NA (NA)18 (0.140) 10/164 NT NA intergenic (‑91/+43) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
?NC_000913 = 2539688 NA (NA)intergenic (‑105/+29) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit

Only 100 of 218 total aligned reads displayed.

TGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGC  >  NC_000913/2539575‑2539772
                                                                                                   |                                                                                                  
    cTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgc                                                                                                >  1:2192762/1‑100 (MQ=255)
    cTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgc                                                                                                >  2:3838431/1‑100 (MQ=255)
     tCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgcg                                                                                               >  2:3538081/1‑100 (MQ=255)
     tCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgcg                                                                                               <  1:1459903/100‑1 (MQ=255)
      cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  1:953147/100‑1 (MQ=255)
      cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  2:2465680/100‑1 (MQ=255)
      cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              >  2:2458678/1‑100 (MQ=255)
       aCGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCggg                                                                                             >  2:1527123/1‑100 (MQ=255)
        cGATCTCTATCCATACGTGGTGTTGCCTGATGCGCCGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGa                                                                                            >  1:3456677/1‑100 (MQ=255)
        cGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCggg                                                                                             <  1:3105179/99‑1 (MQ=255)
          aTCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCAGATCGCGGGAAg                                                                                          <  2:1241864/100‑1 (MQ=255)
             tctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAgcg                                                                                        <  2:3049171/99‑1 (MQ=255)
                aTCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtc                                                                                    <  2:1336675‑M2/100‑3 (MQ=255)
                   cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgg                                                                                 <  1:2201011‑M2/100‑6 (MQ=255)
                   cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgc                                                                                 <  1:3928555‑M2/100‑6 (MQ=255)
                    aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                <  1:1092581‑M2/100‑7 (MQ=255)
                     tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAACCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggc                                                                               <  2:1580235‑M2/100‑8 (MQ=255)
                     tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggc                                                                               <  2:3383647‑M2/100‑8 (MQ=255)
                     tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAAACTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGcc                                                                                      >  2:2750575/1‑93 (MQ=255)
                      aCGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggct                                                                              <  1:2375751‑M1/100‑23 (MQ=255)
                      aCGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                                                              <  1:2805560/100‑1 (MQ=255)
                       cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                                                              >  2:1995593/1‑99 (MQ=255)
                        gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                            <  1:2011334/100‑1 (MQ=255)
                         tggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctttt                                                                           <  2:2223839‑M1/100‑26 (MQ=255)
                          ggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCTGGTCTATAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggcttttt                                                                          <  1:334587‑M1/100‑27 (MQ=255)
                          ggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTa                                                                          <  1:3783787/100‑1 (MQ=255)
                           gtgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTaa                                                                         >  2:617785/1‑100 (MQ=255)
                            tgtTGCTTGATGCGACGCTTGCGCGTCTTATCAGGTCTGCAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                        <  2:187094/100‑1 (MQ=255)
                            tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                        <  1:1563068/100‑1 (MQ=255)
                             gtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACa                                                                       >  1:2652680/1‑100 (MQ=255)
                              ttGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACAt                                                                      <  2:3775932/100‑1 (MQ=255)
                              ttGCCTGATGCGACGATTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctttttaatg                                                                      <  1:3865060‑M1/100‑31 (MQ=255)
                               tGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctttttaatgg                                                                     <  1:1032550‑M1/100‑32 (MQ=255)
                               tGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctttttaatgg                                                                     <  1:959682‑M1/100‑32 (MQ=255)
                                gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                    >  1:2974721/1‑100 (MQ=255)
                                acctgataagacgcgcaagcgtcgcatcaggTCTACAGGTTACAAACCTTGCCATTAAAAAAACCGGATCACGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                    >  1:1350479‑M2/32‑100 (MQ=255)
                                 cctgataagacgcgcaagcgtcgcatcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCa                                                                   >  2:1156445‑M2/31‑100 (MQ=255)
                                 CCTGCTGCGACGCTTCCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGCGACGCGCCTCCGGGCGTTTAACATTc                                                                    <  2:1822153‑M1/99‑1 (MQ=255)
                                   tgataagacgcgcaagcgtcgcatcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                 >  2:2966731‑M2/29‑100 (MQ=255)
                                   tgataagacgcgcaagcgtcgcatcaggTCTACAGGTTACAAACCTTGCCATTAAAAAACACGGATAGCGGGAAGCGACTCCGGGCGTTTAACATTCACt                                                                 >  1:1975005‑M2/29‑100 (MQ=255)
                                   tgataagacgcgcaagagaagcatcaggTCTACAGGTTAAAAACCTTGCCATTAAAAAGCCGGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                  >  2:471775‑M2/29‑99 (MQ=255)
                                   TGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                 >  1:2110085‑M1/1‑100 (MQ=255)
                                   TGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                 >  1:619107‑M1/1‑100 (MQ=255)
                                      TGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACATTGCCATTAAAAAGCCCGGCTCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCaa                                                              <  2:2130721‑M1/100‑1 (MQ=255)
                                       gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAACGCCCGGAggcgcttcccgcgatccgggctttttaatggcaaggtttg                                                            <  2:2712795‑M1/100‑41 (MQ=255)
                                        cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                                                            >  2:2245006/1‑100 (MQ=255)
                                        cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                                                            <  1:747189/100‑1 (MQ=255)
                                         gACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATAGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCt                                                           >  2:542607/1‑100 (MQ=255)
                                              ttGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAg                                                      <  2:717172/100‑1 (MQ=255)
                                               tGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAgg                                                     >  2:1666122/1‑100 (MQ=255)
                                                  gcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTCTCAGgcgc                                                  <  2:2218818/100‑1 (MQ=255)
                                                  gcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgcgc                                                  <  2:2067513/100‑1 (MQ=255)
                                                      cTTATCAGGTCTACAGGTTACAAACCTTGCTATTAAAAAGCCCGGAgtcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacct                                              <  1:3344239‑M1/100‑55 (MQ=255)
                                                        tATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgtg                                            <  2:3467638/100‑1 (MQ=255)
                                                        tATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgtg                                            >  2:3437542/1‑100 (MQ=255)
                                                        tATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCACCTCCGGGAGTTTAACATTCAATCAACCTATAAGACGCtt                                                >  1:3535551/1‑96 (MQ=255)
                                                           caggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCga                                         <  2:1315612‑M2/96‑1 (MQ=255)
                                                              gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                      >  1:1082861‑M2/2‑100 (MQ=255)
                                                                    aGGTTACAAACCTTGCCATTAAAAAGGCCGGAACGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGtt                                >  2:2819002/1‑100 (MQ=255)
                                                                      gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCTGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                              <  1:3368644/100‑1 (MQ=255)
                                                                      gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                              <  1:1165380/100‑1 (MQ=255)
                                                                      gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                              <  2:2860570/100‑1 (MQ=255)
                                                                       ttACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCt                             <  1:2949825/100‑1 (MQ=255)
                                                                       ttACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCt                             <  2:3483403/100‑1 (MQ=255)
                                                                         aCAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCa                           <  1:3580546/100‑1 (MQ=255)
                                                                          cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                          <  2:1571686/100‑1 (MQ=255)
                                                                          cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                          >  1:1947619/1‑100 (MQ=255)
                                                                             aCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATcgc                       <  1:1835391/100‑1 (MQ=255)
                                                                             aCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATcgc                       >  2:651141/1‑100 (MQ=255)
                                                                               cTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCgg                     >  1:3277992/1‑100 (MQ=255)
                                                                                ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCTGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCggg                    <  1:664327/100‑1 (MQ=255)
                                                                                ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCggg                    <  1:1315534/100‑1 (MQ=255)
                                                                                ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTAACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATcgcg                      >  1:1078930/1‑98 (MQ=255)
                                                                                  gCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGtt                  >  1:3879055/1‑100 (MQ=255)
                                                                                   ccATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggca                 <  2:2674157‑M2/100‑70 (MQ=255)
                                                                                   ccATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggca                 <  2:3305317‑M2/100‑70 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaa                <  2:1088832‑M2/100‑71 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggcattttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaa                <  2:2082899‑M2/100‑71 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCATGCGCTTTGTGCGAGAGCAAGTTCCCCATCGCGGGTTTc                <  2:2410847/100‑1 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCTTCATCGCGGGtttt                >  1:860284/1‑99 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                <  2:2634864/100‑1 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                <  1:2380660/100‑1 (MQ=255)
                                                                                     aTTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaac               <  1:544311‑M2/100‑72 (MQ=255)
                                                                                     aTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCg               >  2:3367953/1‑100 (MQ=255)
                                                                                     aTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCg               >  2:2189864/1‑100 (MQ=255)
                                                                                     aTTAAAAAGCCCGGATCACGGGAAGCGCCtccgggctttttaatggcaaggttagtaaactgtagacctgaaacgacgcgcaagc                              <  2:3519137‑M2/85‑57 (MQ=255)
                                                                                      ttAAAAAGCCCGGATCGCGGGAAGCGTCTCCGGGCTTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGa              <  1:838509/100‑1 (MQ=255)
                                                                                      ttAAAAAGCCCGGATCGCGGGAAGCGCCTCTGGGTGTTTAACATTCACTCAACCTATCAGGTGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGa              <  1:510239/100‑1 (MQ=255)
                                                                                      ttAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGa              <  2:1082850/100‑1 (MQ=255)
                                                                                       tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAAGCGCTTTGTACGAGAGCAAGTTCCTCATCGCGGGTTTCGAt             >  1:1375054/1‑100 (MQ=255)
                                                                                        aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa            <  1:3602696/100‑1 (MQ=255)
                                                                                        aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa            <  2:2313052/100‑1 (MQ=255)
                                                                                         aaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATAc           >  1:2848533/1‑100 (MQ=255)
                                                                                            aGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacg         <  2:2516274‑M2/99‑78 (MQ=255)
                                                                                             gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta       <  1:2198737‑M2/100‑80 (MQ=255)
                                                                                              cccGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataaaacacgcaagcgtcgcatcaggcaacaccacgtat      <  1:54849‑M2/100‑81 (MQ=255)
                                                                                              cccGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcg      >  1:1257306/1‑100 (MQ=255)
                                                                                               ccGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatg     <  1:2059998‑M1/100‑96 (MQ=255)
                                                                                                 ggATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtcg   >  1:2593189/1‑100 (MQ=255)
                                                                                                  gAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatggat  <  1:3366136‑M1/100‑99 (MQ=255)
                                                                                                   |                                                                                                  
TGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGC  >  NC_000913/2539575‑2539772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.