BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2568139 =	NA (NA)	12 (0.090)	6/164	NT	NA	noncoding (1/183 nt)	REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences
*	?	NC_000913	3231282 =	NA (NA)	12 (0.090)	6/164	NT	NA	noncoding (31/283 nt)	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 229 total aligned reads displayed.

ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238

gcggataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagg                                                                                                     <  1:1373496‑M1/1‑1 (MQ=255)

gcggataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagg                                                                                                     >  2:3296921‑M1/100‑100 (MQ=255)

gcggataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagg                                                                                                     >  2:1350056‑M1/100‑100 (MQ=255)

gcggataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagg                                                                                                     <  1:2689558‑M1/1‑1 (MQ=255)

gcggataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagg                                                                                                     >  1:3503175‑M1/100‑100 (MQ=255)

 tCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGAATTTACTCCCTGTTATTTGTTATTTCTTgg                                                                                                    >  2:1254269/1‑100 (MQ=255)

  ggataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGc                                                                                                   <  2:2964149‑M1/3‑1 (MQ=255)

  ggataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGc                                                                                                   <  1:3145795‑M1/3‑1 (MQ=255)

  ggataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGc                                                                                                   <  1:3013727‑M1/3‑1 (MQ=255)

   gataaggcgttcacgccggatccgccagttgcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCg                                                                                                  >  1:542252‑M1/97‑100 (MQ=255)

   gataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCg                                                                                                  >  2:3355549‑M1/97‑100 (MQ=255)

   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTcgcg                                                                                                  >  2:1805156/1‑100 (MQ=255)

   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCg                                                                                                  >  2:3231315/1‑100 (MQ=255)

   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCg                                                                                                  <  1:2578847/100‑1 (MQ=255)

    ataaggcgttcacgccgcatccgtcagtggcgcggtgtaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCgg                                                                                                 >  1:1449057‑M1/96‑100 (MQ=255)

    ataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCgg                                                                                                 <  1:3776726‑M1/5‑1 (MQ=255)

    ataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcttcttatccagcctacgggattgcacatgtagGGCgg                                                                                                 >  1:2767477‑M1/96‑100 (MQ=255)

     taatgcgttcacgccgcatccgccagtggcgcgttgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCgg                                                                                                 >  2:2260105‑M1/95‑99 (MQ=255)

     taaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgattgccgcgtcttatccagcctacgggattgcacatgtagGGCGGa                                                                                                <  1:1002645‑M1/6‑1 (MQ=255)

     gTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGCTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCgg                                                                                                 >  2:3448398/1‑99 (MQ=255)

     gTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGa                                                                                                <  2:2394464/100‑1 (MQ=255)

       cTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATg                                                                                              >  1:2787976/1‑100 (MQ=255)

        tACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGCTTTCGTTCATTCCCATCGACTTTACTCCCTGTTAGTTGTTATTTATTAGCGGATg                                                                                              >  1:803623/1‑99 (MQ=255)

         aCGGCAGCTATCAGCATAAAGAACATCATGATGTATATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcg                                                                                            <  1:1194454/100‑1 (MQ=255)

           ggCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcggc                                                                                          >  1:368278/1‑100 (MQ=255)

            gCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcggcg                                                                                         <  1:2850672/100‑1 (MQ=255)

            gCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcggcg                                                                                         >  1:1859106/1‑100 (MQ=255)

            gCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcggcg                                                                                         <  1:3105586/100‑1 (MQ=255)

             cAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGt                                                                                        <  1:1936860/100‑1 (MQ=255)

                  aTCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACg                                                                                   <  1:3752058/100‑1 (MQ=255)

                  aTCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACg                                                                                   <  2:2935070/100‑1 (MQ=255)

                  aTCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACg                                                                                   <  1:2039875/100‑1 (MQ=255)

                   tCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGc                                                                                  >  2:3122840/1‑100 (MQ=255)

                   tCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGc                                                                                  <  2:1928452/100‑1 (MQ=255)

                    cAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGcc                                                                                 <  1:2200396/100‑1 (MQ=255)

                    cAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGcc                                                                                 >  2:3571692/1‑100 (MQ=255)

                    cAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCATTTACTCACTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGcc                                                                                 >  1:2237563/1‑100 (MQ=255)

                      gCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTTTTGGCGGATGCGGCGTAAACGCCtt                                                                               <  2:1025225/100‑1 (MQ=255)

                         tAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  2:208821/1‑100 (MQ=255)

                           ccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCg                                                                          >  1:1058528‑M1/73‑100 (MQ=255)

                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGc                                                                         <  2:264670/99‑1 (MQ=255)

                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGACGTAAACGCCTTATCCGcc                                                                        >  1:3623082/1‑100 (MQ=255)

                             agtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGcc                                                                        >  1:2618111‑M1/71‑100 (MQ=255)

                              gtggcgcggtgcagttgccggatgcaacgcttgtcgcgttttatccggctaggaggattgcacttgtagGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                       >  1:2329234‑M1/70‑100 (MQ=255)

                              gtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                       >  2:1330898‑M1/70‑100 (MQ=255)

                               aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      <  1:904102/100‑1 (MQ=255)

                               aCATCATGATGTACATGATGATTTCGTTAATCCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      <  2:2703066/100‑1 (MQ=255)

                                  tcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                   <  1:1680410/100‑1 (MQ=255)

                                  tcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                   >  1:3539991/1‑100 (MQ=255)

                                  tcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                   <  2:64368/100‑1 (MQ=255)

                                  ncatGATGTACATGATGATTTCGTTAATTCCCATCGCATTTACTCCCTGTTAGTTGTTATTTATTGGCGGCTGNGGCGTAAACGCCTTATCCGCCCTACa                                                                   >  2:659403/2‑100 (MQ=255)

                                      gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               >  1:3263847/1‑100 (MQ=255)

                                        tgTACATGATGATTTTGTTTATTCCCATCGCCTTTTCTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                              <  2:124122/99‑1 (MQ=255)

                                         gTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCaa                                                            >  2:1153731/1‑100 (MQ=255)

                                           aCATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATc                                                          >  1:1358724/1‑100 (MQ=255)

                                              tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                       >  2:3492273/1‑100 (MQ=255)

                                              tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                       >  1:2914065/1‑100 (MQ=255)

                                              tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGATGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGAGCAATCCCg                                                       >  2:51266/1‑100 (MQ=255)

                                                 tgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAg                                                    <  1:3432045/100‑1 (MQ=255)

                                                 tgatTTCGTTAATTCCCATCGCCTTTACTCACTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                      >  2:2476619/1‑98 (MQ=255)

                                                  gatgcgacgcttgccgtgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCTGCCCTACATGTGCAATCCCGTAgg                                                   >  1:1300473‑M1/50‑100 (MQ=255)

                                                   atTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGc                                                  >  2:2848235/1‑100 (MQ=255)

                                                    tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCt                                                 >  2:1474367/1‑100 (MQ=255)

                                                     ttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTg                                                <  2:3539952/100‑1 (MQ=255)

                                                      tCGTTAATTCCCATCGCCTTTTCTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTg                                                <  1:2542362/99‑1 (MQ=255)

                                                      tCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTgg                                               <  1:3814180/100‑1 (MQ=255)

                                                       cGTTAATTCCCATCGCCTTTACTACCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCGTTATCCGCCTTACATGTGCAATCACGTAGGc                                                  >  2:2542339/1‑96 (MQ=37)

                                                        gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                             <  2:1633147/100‑1 (MQ=255)

                                                         ttAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATa                                            >  1:3588481/1‑100 (MQ=255)

                                                          tAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATaa                                           >  2:89318/1‑100 (MQ=255)

                                                           aaTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTGTCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAg                                          >  1:2756106/1‑100 (MQ=255)

                                                           aaTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTAACGAATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAg                                          >  1:1087613/1‑100 (MQ=255)

                                                            aTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGTGGTTGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAg                                          <  1:2107363/99‑1 (MQ=255)

                                                               cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgc                                      >  1:3380178/1‑100 (MQ=255)

                                                                ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgcg                                     >  2:2186916/1‑100 (MQ=255)

                                                                ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgcg                                     >  1:1502689/1‑100 (MQ=255)

                                                                ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAAGCTGGATAAGAcgcg                                     >  1:700389/1‑100 (MQ=255)

                                                                 cATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCgg                                    >  1:356769/1‑100 (MQ=255)

                                                                  aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                   >  2:257232/1‑100 (MQ=255)

                                                                   tCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCa                                  <  2:1673998/100‑1 (MQ=255)

                                                                     gCCTTTACTCTCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCACTCCCGTAGGCTGGATAAGACGCGGCAAg                                >  2:118160/1‑100 (MQ=255)

                                                                     gCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCa                                  >  2:784195/1‑98 (MQ=255)

                                                                     gCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAg                                >  1:2887737/1‑100 (MQ=255)

                                                                      ccTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGc                               >  1:3547282/1‑100 (MQ=255)

                                                                      ccTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCAGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGc                               >  2:121778/1‑100 (MQ=255)

                                                                       cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                              >  2:2449598/1‑100 (MQ=255)

                                                                         ttACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTc                            <  1:172887/100‑1 (MQ=255)

                                                                          tACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                           <  1:3509103/100‑1 (MQ=255)

                                                                          tACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                           <  2:1422922/100‑1 (MQ=255)

                                                                                cTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCg                     >  2:2866979/1‑100 (MQ=255)

                                                                                  gTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGc                   <  2:3872644/100‑1 (MQ=255)

                                                                                       ttgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTg              <  1:83716/100‑1 (MQ=255)

                                                                                            atttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcg         <  2:2773491/100‑1 (MQ=255)

                                                                                            atttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCACGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcg         >  2:741132/1‑100 (MQ=255)

                                                                                              ttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgcg       >  1:688528/1‑100 (MQ=255)

                                                                                              tgtagGGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgcg       <  2:1206669‑M1/95‑1 (MQ=255)

                                                                                               tattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCgcgc      >  1:3028698/1‑100 (MQ=255)

                                                                                               tattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCgcgc      >  1:426761/1‑100 (MQ=255)

                                                                                                  gGGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCAc   <  1:512119‑M1/99‑1 (MQ=255)

                                                                                                   GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCCCCa    <  2:1483492‑M1/98‑1 (MQ=255)

ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.