BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2568139 =	NA (NA)	12 (0.090)	6/164	NT	NA	noncoding (1/183 nt)	REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences
*	?	NC_000913	3231282 =	NA (NA)	12 (0.090)	6/164	NT	NA	noncoding (31/283 nt)	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 222 total aligned reads displayed.

TCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCC  >  NC_000913/3231183‑3231381

tcCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                                                     <  2:2381747/100‑1 (MQ=255)

tcCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                                                     >  2:3721806/1‑100 (MQ=255)

  cTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                   >  2:3501554/1‑100 (MQ=255)

  cTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCATAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                                                    <  1:3684351/99‑1 (MQ=255)

   tGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTAc                                                                                                  >  2:220429/1‑100 (MQ=255)

    ggAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                 <  1:2755866/100‑1 (MQ=255)

    ggAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                 <  1:1586211/100‑1 (MQ=255)

      aGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                                               <  1:3758795/100‑1 (MQ=255)

       gTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgt                                                                                              >  1:1739612/1‑100 (MQ=255)

        tGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGTATGTTGCGTAAACGCCTTATCCGCCCTACAtgtg                                                                                             <  2:1856253/100‑1 (MQ=255)

         gCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                                                            >  2:1235498/1‑100 (MQ=255)

         gCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATACGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                                                            >  1:2445430/1‑100 (MQ=255)

          ccGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                                                           >  2:1098359/1‑100 (MQ=255)

          ccGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                                                           >  2:488471/1‑100 (MQ=255)

             cgcATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtc                                                                                        >  2:1051377/1‑100 (MQ=255)

              gcATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcc                                                                                       <  1:1374793/100‑1 (MQ=255)

              gcATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcc                                                                                       <  2:2363227/100‑1 (MQ=255)

               cATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGCATGCGGCGTAAACGCCTTATCCGCCCTCCATGTGCACtcc                                                                                       >  2:159825/1‑99 (MQ=255)

                 tttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcctcc                                                                                    <  2:3464783/100‑1 (MQ=255)

                 tttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcctcc                                                                                    <  2:1763120/100‑1 (MQ=255)

                 tttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcctcc                                                                                    >  2:898337/1‑100 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  <  2:3785503/100‑1 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  <  2:527376/100‑1 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  >  1:3496890/1‑100 (MQ=255)

                      atatGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGcc                                                                               >  1:2826389/1‑100 (MQ=255)

                        atGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCgg                                                                             >  2:2594104/1‑100 (MQ=255)

                        atGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCAGATGCAGCATAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCgg                                                                             >  1:1002036/1‑100 (MQ=255)

                         tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                            <  2:1957208/100‑1 (MQ=255)

                         tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                            <  1:877305/100‑1 (MQ=255)

                         tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                            >  1:1251339/1‑100 (MQ=255)

                             gtATAACGATTTTTTCCGTAAGCAATAATTTGCCACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaaa                                                                        >  1:407707/1‑100 (MQ=255)

                               ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAc                                                                      <  1:3708737/100‑1 (MQ=255)

                                taACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAc                                                                      >  2:1294959/1‑99 (MQ=255)

                                 aaCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTCACGAATGCGGCGTAAACGCCTTATCATCACCACATGTGCAATGCTCCTGGCCGGATAAAAcgc                                                                    >  2:1607722/1‑100 (MQ=37)

                                  aCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcgcg                                                                   >  1:2019957/1‑100 (MQ=255)

                                  aCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcgcg                                                                   >  2:717193/1‑100 (MQ=255)

                                   cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCgg                                                                  >  2:1701029/1‑100 (MQ=255)

                                   cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCgg                                                                  <  1:999439/100‑1 (MQ=255)

                                    gATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGc                                                                 <  1:2937292/100‑1 (MQ=255)

                                      ttttttCCGCAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGc                                                                 <  2:2301132/98‑1 (MQ=255)

                                           tCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGtt                                                          <  1:2775686/100‑1 (MQ=255)

                                           tCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGtt                                                          <  1:2659773/100‑1 (MQ=255)

                                            ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTg                                                         <  2:3836668/100‑1 (MQ=255)

                                            ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTg                                                         <  2:761835/100‑1 (MQ=255)

                                            ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTg                                                         <  1:1087227/100‑1 (MQ=255)

                                             ngTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGc                                                        >  1:3127868/2‑100 (MQ=255)

                                             cGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCATATCCGCCCTACGTGTGCAATCCTCCTGGACGGATAAAACGCGGCa                                                                >  2:3186116/1‑92 (MQ=255)

                                                aaGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATc                                                     >  2:3346027/1‑100 (MQ=255)

                                                 aGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                    >  1:1436486/1‑100 (MQ=255)

                                                  gCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCg                                                   >  1:3641006/1‑100 (MQ=255)

                                                    aatagtTTGCAGCTGCTGGCAAATGCGGCGTAAAAGCCTTATCGCCCCTACATGTGCAATCCTCCTGGATGGATCAAACGAGGCAGACGtt                                                          >  2:2719641/1‑91 (MQ=16)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATTCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGc                                                 <  1:3386708/100‑1 (MQ=255)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGc                                                 >  1:302542/1‑100 (MQ=255)

                                                     ataatTTGCAACTGCTGGCGGATGCGGCGTAAACGTCTTATTCGCTCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCa                                                <  1:2134559/100‑1 (MQ=255)

                                                     ataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCa                                                >  2:74848/1‑100 (MQ=255)

                                                      taatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCaa                                               <  2:364383/100‑1 (MQ=255)

                                                        atTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACt                                             <  2:3358866/100‑1 (MQ=255)

                                                           tGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCTCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCa                                          <  1:1235512/100‑1 (MQ=255)

                                                            gCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGACAAGCGTTGCATCCGGCAACAGCAc                                         >  2:1116230/1‑100 (MQ=255)

                                                             cAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAcc                                        <  1:3887656/100‑1 (MQ=255)

                                                                ctgctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTAGCCGGATAAAAAGCGGCAAGCGTTGCATCCGGCAACTGCACcgcg                                     >  1:2369261/1‑100 (MQ=255)

                                                                  gctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                   >  1:502205/1‑100 (MQ=255)

                                                                    gggcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAc                                 >  2:1330898‑M2/32‑100 (MQ=255)

                                                                     ggcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACt                                >  1:2618111‑M2/31‑100 (MQ=255)

                                                                      gcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                               >  2:3091924‑M2/30‑100 (MQ=255)

                                                                       cggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                              >  1:3621016‑M2/29‑100 (MQ=255)

                                                                       cGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGTCCGGATAAAACGCAACAAGCGTTACATCCAACAACTACACCTCGCCACt                                >  1:1707423/1‑98 (MQ=18)

                                                                        ggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             >  2:2435902‑M2/28‑100 (MQ=255)

                                                                        ggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             >  1:472242‑M2/28‑100 (MQ=255)

                                                                        ggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             >  1:354403‑M2/28‑100 (MQ=255)

                                                                        gcaTGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             <  1:2016937/98‑1 (MQ=255)

                                                                            gcggcgTAAACGCCTTATCCGCCCTACATGTGCACTCCTCCTGGCCGGATAAAACTCACCAAACGATACATCCGGCAACTACACCGCGCCACTGGCTGAt                         >  1:575386/1‑100 (MQ=18)

                                                                            gcggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGAt                         >  2:65305/1‑100 (MQ=255)

                                                                            gcggcgTAAACGCCTTATCCGCACTACATGTTCAATCATCCTGGCCGCATAAAACGCGGCAAGCGTTGCATTCGGCAACTGCACCGCGCCACTGGCGGAt                         <  2:2649123/100‑1 (MQ=18)

                                                                              ggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgc                       >  2:1533974/1‑100 (MQ=255)

                                                                                cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAATCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGAt                         <  2:2094968/96‑1 (MQ=255)

                                                                                cgTAAACCCCTTTTCCGCCCTACATTTGAAATCCTCCTGCCCGCATAAACCGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACGGGCGGa                          <  2:2895886/95‑1 (MQ=255)

                                                                                  tAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcggcg                   <  1:758973/100‑1 (MQ=255)

                                                                                    aaCGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                 <  1:3812962/100‑1 (MQ=255)

                                                                                    aaCGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                 >  2:1559326/1‑100 (MQ=255)

                                                                                    aaCGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg                 <  1:1539630/100‑1 (MQ=17)

                                                                                     aCGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGa                <  2:3622294/100‑1 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             <  2:3148132/100‑1 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             <  1:2782061/100‑1 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             <  1:2694523/100‑1 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCAGATGCGGCGTGAAc              >  1:3866885/1‑99 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTCGCGGATGCGGCGCGAACg             >  2:2984722/1‑100 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTACACCGCGCCACTGGCGGATACGGCGTGAACg             >  1:2203137/1‑100 (MQ=255)

                                                                                         cTTATCCGCCCTACATGTGCAATCCTCCTGGCCGAATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGc            >  2:1258011/1‑100 (MQ=255)

                                                                                          ttATCCGCCCTACATATGCAATACTCCAAGCAGGCTAAAACGAGGCAAGCGTTGCATCCGGCAACTGCACCGCGACACTGGCGGATGCGGCGTGAACAcc           >  2:2405416/1‑100 (MQ=17)

                                                                                            atccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCtt         <  2:1865994‑M2/93‑1 (MQ=255)

                                                                                            atccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCt          >  2:3459538‑M2/8‑99 (MQ=255)

                                                                                              ccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAACGCGCCACTGGCGGATGCGGCGTGAACGCATTa        >  2:2260105‑M2/6‑99 (MQ=255)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc      >  1:2964175‑M2/5‑100 (MQ=255)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc      <  2:272718‑M2/96‑1 (MQ=255)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCAACTGGCGGATCCGGCGTGAACGCCTTATc      >  1:542252‑M2/5‑100 (MQ=255)

                                                                                                  ccTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCAACTAACAGATGCAGCAAGAACACCTTATCCGc   >  1:3741841/1‑100 (MQ=18)

                                                                                                  cCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGc   >  2:3296921‑M2/2‑100 (MQ=255)

                                                                                                   cTATATGTGCAATCCTCCTGGCTGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGcc  <  1:2530457/100‑1 (MQ=255)

                                                                                                   cTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGcc  <  2:1458284/100‑1 (MQ=255)

TCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCC  >  NC_000913/3231183‑3231381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.