New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3217490NA (NA)14 (0.110) 9/164 NT NA noncoding (57/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3217522 NA (NA)noncoding (89/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 216 total aligned reads displayed.

CAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCG  >  NC_000913/3217391‑3217588
                                                                                                   |                                                                                                  
cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAg                                                                                                    >  2:768190/1‑100 (MQ=255)
  aCTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgc                                                                                                  >  2:1076776‑M1/1‑98 (MQ=255)
  aCTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgc                                                                                                  <  2:3470563‑M1/100‑3 (MQ=255)
  aCTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgc                                                                                                  <  2:1979428‑M1/100‑3 (MQ=255)
   cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcc                                                                                                 <  1:541149‑M1/100‑4 (MQ=255)
   cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcc                                                                                                 >  1:2259204‑M1/1‑97 (MQ=255)
   cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCCTATCCGGCCTACACCCGCTACACACCCCGCAGg                                                                                                   >  2:3814171‑M1/1‑97 (MQ=255)
    tGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcct                                                                                                <  1:1523498‑M1/100‑5 (MQ=255)
    tGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcct                                                                                                <  2:3370539‑M1/100‑5 (MQ=255)
    tGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcct                                                                                                <  1:1856287‑M1/100‑5 (MQ=255)
    tGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcc                                                                                                 <  2:2285303‑M1/99‑4 (MQ=255)
     ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCAGCAGgcctg                                                                                               >  2:1479007‑M1/1‑95 (MQ=255)
        ttAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATa                                                                                            <  1:3786292/100‑1 (MQ=255)
           aTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGa                                                                                         >  2:1405315/1‑100 (MQ=255)
           aTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGa                                                                                         >  1:1820489/1‑100 (MQ=255)
             cgccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGAt                                                                                        >  1:714426/1‑99 (MQ=255)
             cgccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATg                                                                                       <  2:2559861/100‑1 (MQ=255)
              gccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACAAACCCCGCAGGCCTGATAAGATgc                                                                                      >  1:1402485/1‑100 (MQ=255)
                 gcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCTTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGcc                                                                                   <  1:1202109/100‑1 (MQ=255)
                  cATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCa                                                                                  <  2:2976877/100‑1 (MQ=255)
                    tCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgc                                                                                >  1:1619377/1‑100 (MQ=255)
                      cGCCAGTGGCGCGGTGCACTTGCCGGATGCGATGCTTCCCGCGCCCTATCCGGCCTACACCCGCTACACACCCCGCAGTTCTGATAAGATGCGCCAgca                                                                               <  2:1853997/99‑1 (MQ=25)
                      cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                                              >  1:1492462/1‑100 (MQ=255)
                       gCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatc                                                                             <  1:516842/100‑1 (MQ=255)
                         cAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcgc                                                                           <  1:1913669/100‑1 (MQ=255)
                          aGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCA                                                                          >  1:444687‑M2/1‑100 (MQ=255)
                              gcgcGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCATgcctgatgcgatgctggcgcatcttatcag                                                                      <  1:309005‑M1/100‑31 (MQ=255)
                              gcgcGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAG                                                                      >  1:164958‑M2/1‑100 (MQ=255)
                               cgcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGG                                                                     >  1:1431835‑M2/1‑100 (MQ=255)
                               cgcgGTGCAATTGCAGGATGCGACGCTTGACGCGCCTTATCCGGCCTACCCCCGCTACACACCCCGCAGgcctgatgcgatgctggcgcatcttatcagg                                                                     <  2:2619194‑M1/100‑32 (MQ=255)
                                gcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCTTACATCCGCTACACACCCCGCAGgcctgatgcgatgctggcgcatcttatcaggc                                                                    <  1:3222357‑M1/100‑33 (MQ=255)
                                gcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGTTAAGATGCGCCAGCATCGCATCAG                                                                      >  2:3747552‑M2/1‑98 (MQ=255)
                                gcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGC                                                                    >  1:3640828‑M2/1‑100 (MQ=255)
                                gcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGC                                                                    >  1:112370‑M2/1‑100 (MQ=255)
                                 cgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcctgatgcgatgctggcgcatcttatcaggcc                                                                   <  1:1507029‑M1/100‑34 (MQ=255)
                                  ggTGAAATTGCCGGATGCGACGCTTGACGGGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGgcctgataagatgctggcgcatcttatca                                                                       <  2:930535‑M1/95‑30 (MQ=255)
                                   gTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCACAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCAtt                                                                 >  1:3194801/1‑100 (MQ=255)
                                     gCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtgt                                                               >  1:842656/1‑100 (MQ=255)
                                     gCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtgt                                                               >  2:2945373/1‑100 (MQ=255)
                                       aaTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGc                                                             <  2:3278334/100‑1 (MQ=255)
                                        aTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCt                                                            <  2:2883258/100‑1 (MQ=255)
                                         ttGCCGGATGTGACGCTTGACGCGCCTTATCCGGCCTACCCCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCt                                                            <  2:2427942/99‑1 (MQ=255)
                                         ttGCCGGATGTGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATCAGATGCGCCAGCATCGCATCAGGCATTGTGCTc                                                           <  2:2582775/100‑1 (MQ=255)
                                          tGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                                          <  1:627842/100‑1 (MQ=255)
                                           gCCGGATGCGACGCTTGACGCGCCTTTTCCGGCCTACACCCGCTACACACCCCGCAGgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgt                                                         <  1:1329410‑M1/100‑44 (MQ=255)
                                           gCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCa                                                         <  1:3834432/100‑1 (MQ=255)
                                           gCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCa                                                         <  2:92487/100‑1 (MQ=255)
                                            ccGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                                        >  1:1448039/1‑100 (MQ=255)
                                             cGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAc                                                       <  2:1620200/100‑1 (MQ=255)
                                              ggATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAcc                                                      <  2:896627/100‑1 (MQ=255)
                                                 tGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCTTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgcc                                                   >  1:1792351/1‑100 (MQ=255)
                                                  gCGACGCTTGACGCGCTTTATCCGGCATACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgccg                                                  <  1:2722458/100‑1 (MQ=255)
                                                  gCGACGCTTGACGCGCCTTATCTGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATACGCCAGCATCGCATCAGGCATTGTCCTCCAAccgccg                                                  >  2:3649645/1‑100 (MQ=255)
                                                  gCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgccg                                                  <  2:942174/100‑1 (MQ=255)
                                                  gCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTACTCCAAccgccg                                                  >  1:1743234/1‑100 (MQ=255)
                                                  gCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCAGCGCATCAGGCATTGTGCTCCAAccgccg                                                  <  1:255784/100‑1 (MQ=255)
                                                   cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgccg                                                  >  1:2416056/1‑99 (MQ=255)
                                                   cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                                                 >  1:793383/1‑100 (MQ=255)
                                                   cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAAGCATTGTGCTCCAACCGCCgg                                                 >  1:865958/1‑100 (MQ=255)
                                                   cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAAATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                                                 >  1:2984278/1‑100 (MQ=255)
                                                    gACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGa                                                >  2:2848152/1‑100 (MQ=255)
                                                    gACGCTTGACGCGCATAATCCGGCCAACACCCGCGACAAACCCAGCAGGCCTGATACGGTGCGCAAGCATCGCATCAGGCATTGTGTCGCAAccgcc                                                   >  2:1210252/1‑97 (MQ=21)
                                                      cGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATc                                              >  1:709385/1‑100 (MQ=255)
                                                       gCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACACCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATcc                                             >  2:3037846/1‑100 (MQ=255)
                                                        cTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCg                                            <  2:860098/100‑1 (MQ=255)
                                                         ttGACGCGCCTTATCCGGTCTACACCCGCTACACACCCCGTAGgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtagcgggtgtagg                                           <  1:1464664‑M1/100‑58 (MQ=255)
                                                         ttGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCgg                                           <  2:2199195/100‑1 (MQ=255)
                                                          tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                                          <  2:1466722/100‑1 (MQ=255)
                                                             cgcgCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATa                                       >  2:2030599/1‑100 (MQ=255)
                                                              gcgcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAc                                      <  2:2445593/100‑1 (MQ=255)
                                                               cgcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAcc                                     <  2:1776830/100‑1 (MQ=255)
                                                               cgcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAcc                                     <  2:389839/100‑1 (MQ=255)
                                                                gcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCTACCGCCGGATCCGGCATACCg                                    <  2:3720063/100‑1 (MQ=255)
                                                                gcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCg                                    <  1:3009270/100‑1 (MQ=255)
                                                                gcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCAACAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCg                                    >  1:3439285/1‑100 (MQ=255)
                                                                  cTTATCCGGCCTACACCCGCTACACTCCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCATGCATTTTGCTCCAACCGCCGGATACGACATACCGAt                                  >  1:3135087/1‑100 (MQ=38)
                                                                     aTCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTaa                               >  1:2897845/1‑100 (MQ=255)
                                                                       ccGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg                             >  2:1059205/1‑100 (MQ=255)
                                                                       ccGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg                             >  2:1683053/1‑100 (MQ=255)
                                                                       ccGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg                             <  1:3404754/100‑1 (MQ=255)
                                                                       ccGGCCTACACACGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg                             >  2:2325229/1‑100 (MQ=255)
                                                                        cGGCCTACACCCGCTACACACCCCTCAGGCCTTATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc                            <  1:3922808/100‑1 (MQ=255)
                                                                         ggCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAAt                              <  2:1001254/97‑1 (MQ=255)
                                                                             tACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTAc                       >  1:3587445/1‑100 (MQ=255)
                                                                               cacCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCCCAGGATCCGGCATACCGATTAATGCAGTACCg                     >  1:1731068/1‑100 (MQ=255)
                                                                                acCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGt                    <  1:2379739/100‑1 (MQ=255)
                                                                                 cccGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCctgcggggtgtgtagcgggtgtaggccggataaggcgcgtcaagcgtc                    <  2:1574051‑M2/99‑49 (MQ=255)
                                                                                 cccGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTC                   <  1:2174540‑M1/100‑1 (MQ=255)
                                                                                       acacacCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCG             <  2:467624‑M1/100‑1 (MQ=255)
                                                                                         acacCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTc           >  1:3793736/1‑100 (MQ=255)
                                                                                         acacCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTc           >  1:928285/1‑100 (MQ=255)
                                                                                           acCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGTCATTGTGCTCCAACCGCCGGATCCGGCATACCGAGTAATGCAGTACCGTCACCGCGTCtt         <  1:401897/100‑1 (MQ=255)
                                                                                            ccccGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTc        >  2:1565827/1‑100 (MQ=255)
                                                                                            ccccGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTc        >  1:819883/1‑100 (MQ=255)
                                                                                             cccGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTcc       >  1:15382/1‑100 (MQ=255)
                                                                                              ccGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAATACCGTCACCGCGTCTTCCa      >  1:3567090/1‑100 (MQ=255)
                                                                                               ngCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAg     >  2:249293/2‑100 (MQ=255)
                                                                                               cGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAg     <  2:2668979/100‑1 (MQ=255)
                                                                                                 cAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCTACCGCCGGATTCGGTATTCTTATTAATTCTGTACCTTCACCTCTTTTTcc       <  2:318201/96‑1 (MQ=16)
                                                                                                  aGGCCTGATAAGATGCGCCAGCATCGCATCAGGCctgcggggtgtgtagcgggtgtagaccgaataaggcgcgtcaagagtcgcatccggcaattgcacc  <  1:336001‑M2/100‑67 (MQ=255)
                                                                                                   |                                                                                                  
CAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCG  >  NC_000913/3217391‑3217588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.