BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3674441	NA (NA)	11 (0.090)	6/164	NT	NA	noncoding (61/93 nt)	REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 3674473	NA (NA)	11 (0.090)	6/164	NT	NA	noncoding (93/93 nt)	REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 204 total aligned reads displayed.

CGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAA  >  NC_000913/3674342‑3674540

cgacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAg                                                                                                     >  2:1456741/1‑100 (MQ=255)

cgacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAg                                                                                                     >  2:386769/1‑100 (MQ=255)

 gacCCGCGAATGCCGGGGAAAACGCAGTCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAg                                                                                                     <  1:3679060/99‑1 (MQ=255)

 gACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGg                                                                                                    >  2:1017453‑M1/1‑99 (MQ=255)

   cccGCGAATGCCGGGGAAAACGCAGCCTTCAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACGATTTTATTCGGCCTGGCTCCCCGTAGgcc                                                                                                  <  2:2346606‑M1/100‑4 (MQ=255)

    ccGCTAATGCCGGTGAAAACGCAGCCTTAAAACAAGCCGGAGGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGg                                                                                                    <  2:2549252‑M1/97‑2 (MQ=255)

    ccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccg                                                                                                 <  2:1752124‑M1/100‑5 (MQ=255)

    ccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccg                                                                                                 >  1:2982059‑M1/1‑96 (MQ=255)

      gcgAATGCCGGGGAAAATGCAGCCTTATAATAGTCCGGATGCGGGGTAAAAGGCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccgga                                                                                               <  1:290547‑M1/100‑7 (MQ=255)

      gcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTAGCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccgg                                                                                                <  1:826458‑M1/99‑6 (MQ=255)

       cgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggat                                                                                              <  2:106445‑M1/100‑8 (MQ=255)

       cgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggat                                                                                              >  1:1637399‑M1/1‑93 (MQ=255)

        gAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCTTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATa                                                                                             <  1:411021/100‑1 (MQ=255)

          aTGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAg                                                                                           <  1:2204604/100‑1 (MQ=255)

             ccGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                                                                                        >  2:279873/1‑100 (MQ=255)

             ccGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                                                                                        <  1:3540185/100‑1 (MQ=255)

              cGGGGAAAACGCAGCCTTAAAATAGGCCGGATGAGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                                                                                        >  2:555366/1‑99 (MQ=255)

                 ggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGcc                                                                                    >  1:3299256/1‑100 (MQ=255)

                 ggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGcc                                                                                    <  1:2305243/100‑1 (MQ=255)

                    aaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgc                                                                                 >  1:2493294/1‑100 (MQ=255)

                      aCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcat                                                                               >  2:708259/1‑100 (MQ=255)

                        gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg                                                                             <  2:121281/100‑1 (MQ=255)

                        gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg                                                                             <  2:2459113/100‑1 (MQ=255)

                        gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg                                                                             <  1:3097061/100‑1 (MQ=255)

                         cAGCCTTTAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTGTATACGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatc                                                                              >  2:2312616/1‑98 (MQ=255)

                           gCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGACTCCCCGTCGGCAGGATAAGATGCGCCAGCATCGCA                                                                           <  2:3473869‑M2/99‑1 (MQ=255)

                            ccTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATC                                                                         <  1:60708‑M2/100‑1 (MQ=255)

                             cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatcc                                                                        <  1:1829694‑M1/100‑30 (MQ=255)

                             cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCAAGCATCGCATCC                                                                        <  1:1111083‑M2/100‑1 (MQ=255)

                             cTTAAAATAGGCCGGATGAGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATC                                                                         <  2:44736‑M2/99‑1 (MQ=255)

                              ttAAAATAGGGCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGtccggttgcgttgttggcgcatcttatcc                                                                        <  2:3906640‑M1/99‑30 (MQ=255)

                              ttAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCG                                                                       <  2:398127‑M2/100‑1 (MQ=255)

                               tAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGG                                                                      >  1:1441460‑M2/1‑100 (MQ=255)

                                aaaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCGCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGC                                                                     >  2:2080544‑M2/1‑100 (MQ=255)

                                aaaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggc                                                                     <  2:638478‑M1/100‑33 (MQ=255)

                                aaaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggc                                                                     <  2:2625979‑M1/100‑33 (MQ=255)

                                 aaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCt                                                                    >  1:849350/1‑100 (MQ=255)

                                  aaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggcct                                                                   <  2:3818262‑M1/100‑35 (MQ=255)

                                     aGGCCGGATGCGGCGTAAATGCCTTTTCCGGCATACGATTTTATTCGGTCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATaa                                                                <  1:3146369/100‑1 (MQ=255)

                                     aGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATaa                                                                <  2:2697133/100‑1 (MQ=255)

                                       gCCGGATAAGGCGTTTACGCCGCATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATg                                                              >  2:2972371/1‑100 (MQ=25)

                                        ccGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATgc                                                             <  2:2869948/100‑1 (MQ=255)

                                          ggataaggcgTTTACGCCGCATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATgcg                                                            >  2:1311219/7‑99 (MQ=25)

                                           gATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGca                                                          <  1:3812453/100‑1 (MQ=255)

                                            aTGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGcac                                                         <  2:3383931/100‑1 (MQ=255)

                                              gcggcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCCCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACAt                                                       >  2:409369/1‑100 (MQ=255)

                                               cggcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATa                                                      >  1:3219425/1‑100 (MQ=255)

                                               cggcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATACGCCAGCATCGCATCCGGCTATAATACGCACATa                                                      >  1:3359634/1‑100 (MQ=255)

                                                 gcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAAc                                                    >  1:2819150/1‑100 (MQ=255)

                                                      aaCGCCTTATCCGGCCTACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCtt                                               <  1:3874547/100‑1 (MQ=255)

                                                      aaCGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCtt                                               >  2:3046565/1‑100 (MQ=255)

                                                      aaCGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCtt                                               <  1:3429793/100‑1 (MQ=255)

                                                       aCGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGCTAAGATGCGCCAGCATCGCATCCGACTATAATGCGCACATAACCTCTTg                                              >  1:1893220/1‑100 (MQ=255)

                                                        ngCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGACAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGa                                             >  2:3003324/2‑100 (MQ=255)

                                                         gCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGaa                                            <  2:3221369/100‑1 (MQ=255)

                                                          ccTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAACATCGCATCCGGCTATAATGCGCACATAACCTCTTGaaa                                           >  2:2727527/1‑100 (MQ=255)

                                                           cTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGaaa                                           >  2:1873420/1‑99 (MQ=255)

                                                           cTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAAc                                          <  1:3269003/100‑1 (MQ=255)

                                                           cTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAAc                                          <  2:889510/100‑1 (MQ=255)

                                                           cTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAAc                                          >  2:1480912/1‑100 (MQ=255)

                                                              aTCCGTCATACGATTTTATTCAGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCCGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACt                                         >  2:475897/1‑98 (MQ=255)

                                                              aTCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCATCATCGCATCCGACTATAATGAGCACATAACCTCTTGAAAATCg                                       >  1:2191673/1‑100 (MQ=38)

                                                              aTCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCg                                       <  2:3876411/100‑1 (MQ=255)

                                                                ccGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTc                                     <  2:336070/100‑1 (MQ=255)

                                                                   gCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTcccc                                  <  1:3044079/100‑1 (MQ=255)

                                                                     aTACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCag                                <  1:1321390/100‑1 (MQ=255)

                                                                     aTACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCag                                >  1:3440821/1‑100 (MQ=255)

                                                                     aTACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCag                                <  2:3192114/100‑1 (MQ=255)

                                                                      tACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCaga                               >  2:2208196/1‑100 (MQ=255)

                                                                        cGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGc                             >  1:1717214/1‑100 (MQ=255)

                                                                         gATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGcc                            >  2:1963077/1‑100 (MQ=255)

                                                                           ttttATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCctc                          >  2:3580903/1‑100 (MQ=255)

                                                                           ttttATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCctc                          <  1:2337427/100‑1 (MQ=255)

                                                                           ttttATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCctc                          <  2:832724/100‑1 (MQ=255)

                                                                             ttATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCtt                        <  2:1798710/100‑1 (MQ=255)

                                                                               aTTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCa                      >  1:2675495/1‑100 (MQ=255)

                                                                               aTTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCACACATAACCACTTGAAACTCGTCCCCAGAGCCTCTTCa                      >  1:2019208/1‑100 (MQ=255)

                                                                                ttCGGCCTGGCTCCCGGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAg                     <  1:3861332/100‑1 (MQ=255)

                                                                                ttCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAg                     <  2:641539/100‑1 (MQ=255)

                                                                                ttCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAg                     <  1:2447253/100‑1 (MQ=255)

                                                                                ttCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAg                     <  2:652358/100‑1 (MQ=255)

                                                                                  cGGCCTGGCTCCCCTTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGcc                   <  2:2667666/100‑1 (MQ=255)

                                                                                   ggCCTGGCTCCCCGTAGGCCGTATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCa                  <  1:96903/100‑1 (MQ=255)

                                                                                   ggCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCctacggggagccaggccgaataaaatcgtatgccggataagacgtttacg                   <  1:971534‑M2/99‑51 (MQ=255)

                                                                                   ggCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCa                  <  2:3681754/100‑1 (MQ=255)

                                                                                   ggCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCa                  >  2:456575/1‑100 (MQ=255)

                                                                                     ccTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATc                <  2:3294625/100‑1 (MQ=255)

                                                                                      cTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCAGCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATc                <  2:3092653/99‑1 (MQ=255)

                                                                                          cTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTAttt           >  1:278131/1‑100 (MQ=255)

                                                                                          cTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTAttt           >  2:1680059/1‑100 (MQ=255)

                                                                                             cgcGTAGGCCGTATAAGATGCGCCAGAATCGTATCCGGCTATAATGAGCACATAACCTCTTGAAACCCGTCCCCAGAGCCTCTTCAGCCATCTATTTggg        <  1:699548/98‑1 (MQ=255)

                                                                                             cccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTggg        <  1:2952048/100‑1 (MQ=255)

                                                                                             cccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTggg        <  2:1637384/100‑1 (MQ=255)

                                                                                             cccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTggg        >  1:1066770/1‑100 (MQ=255)

                                                                                             cccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTggg        >  1:3378891/1‑100 (MQ=255)

                                                                                               cGTAGGCCGGATAAGATGCGCCAGCATCGCATCTGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGa       <  1:2744107/99‑1 (MQ=255)

                                                                                                 tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGa       <  2:3740235/97‑1 (MQ=255)

                                                                                                 tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCa    >  1:1729413/1‑100 (MQ=255)

                                                                                                   ggCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCaaa  <  2:1988121/100‑1 (MQ=255)

                                                                                                   ggCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAAATCGACCCCAGAGCCTCTTCAGACATCTATTTGGGAGCaaa  >  1:1588304/1‑100 (MQ=255)

CGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAA  >  NC_000913/3674342‑3674540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.