New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4460417 =NA (NA)12 (0.090) 8/168 NT NA noncoding (3/84 nt) REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4460445 = NA (NA)noncoding (31/84 nt) REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 215 total aligned reads displayed.

CCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAG  >  NC_000913/4460318‑4460515
                                                                                                   |                                                                                                  
ccGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGcc                                                                                                    <  2:2357963/100‑1 (MQ=255)
 gggaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCt                                                                                                   >  1:3005710‑M1/99‑100 (MQ=255)
 cGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCt                                                                                                   >  1:3850693/1‑100 (MQ=255)
 cGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCt                                                                                                   <  2:3686350/100‑1 (MQ=255)
  ggaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTg                                                                                                  >  2:146988‑M1/98‑100 (MQ=255)
     gCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATg                                                                                               >  2:3139724/1‑100 (MQ=255)
       cGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGc                                                                                              >  2:2767675/1‑99 (MQ=255)
        gTTGACGATGTCGCCAGGATAGTACTAATGATAATTCATTATTTCGCCTGGCTTATCAGCCCGCGAGTAGGATGCATCCGGTAATCTATGCCTGATGcaa                                                                                            >  2:164978/1‑98 (MQ=255)
        gTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGa                                                                                            <  2:3850654/100‑1 (MQ=255)
        gTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGa                                                                                            <  2:1764155/100‑1 (MQ=255)
         ttGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGAc                                                                                           <  1:653158/100‑1 (MQ=255)
          tGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACg                                                                                          >  1:1129433/1‑100 (MQ=255)
          tGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACg                                                                                          <  2:842825/100‑1 (MQ=255)
           gACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGc                                                                                         >  2:2782528/1‑100 (MQ=255)
           gACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGc                                                                                         <  1:584919/100‑1 (MQ=255)
           gACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGACTGCATCCGGTAATCAATGCCTGATGCGACGc                                                                                         >  1:2911803/1‑100 (MQ=255)
                 gTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcgc                                                                                   >  1:2497169/1‑100 (MQ=255)
                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcgc                                                                                   >  1:3799210/1‑98 (MQ=255)
                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                 <  1:978818/100‑1 (MQ=255)
                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGACTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                 >  1:3056727/1‑100 (MQ=255)
                    aatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATAAGACGCTGTCGCGTc                                                                                >  2:824886‑M1/80‑100 (MQ=255)
                      cAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCtt                                                                              <  1:2002268/100‑1 (MQ=255)
                        ggATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTAt                                                                            >  2:1710340/1‑100 (MQ=255)
                        ggATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGATAATCAATGCCTGATGCGACGCTGTCGCGTCTTAt                                                                            >  1:3560759/1‑100 (MQ=255)
                         tcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATc                                                                           >  1:2218504‑M1/75‑100 (MQ=255)
                          cactctgagctaagcaaatgccgtattcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCa                                                                          >  1:1323852‑M1/74‑100 (MQ=255)
                          aTAGTACTGATGATAATTAATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa                                                                          <  2:1312297/100‑1 (MQ=255)
                           tAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg                                                                         <  1:785175/100‑1 (MQ=255)
                           tAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg                                                                         <  2:2012059/100‑1 (MQ=255)
                             tctgagctaagcaaatgccggatgcggcttaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCa                                                                          >  2:3406562‑M1/71‑97 (MQ=255)
                             tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                       >  1:1432918‑M1/71‑100 (MQ=255)
                             gTACTGATGATAATTCATTATTTCTCCTTGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                       <  2:1846709/100‑1 (MQ=255)
                             gTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa                                                                          >  2:1267530/1‑97 (MQ=255)
                             gTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                       <  2:643770/100‑1 (MQ=255)
                              tACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                                      <  1:485236/100‑1 (MQ=255)
                               tgagcttagtaaatgccggattcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCt                                                                     >  1:1796034‑M1/69‑100 (MQ=255)
                               tgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCt                                                                     >  2:1892558‑M1/69‑100 (MQ=255)
                                cTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCt                                                                     >  1:684854/1‑99 (MQ=255)
                                cTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTg                                                                    <  2:3018776/100‑1 (MQ=255)
                                 tgatgaTAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTgg                                                                   <  1:927772/100‑1 (MQ=255)
                                  gctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTgg                                                                   >  2:2181757‑M1/66‑99 (MQ=255)
                                  gatgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGa                                                                  >  1:3292840/1‑100 (MQ=255)
                                    tgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                >  2:3822278/1‑100 (MQ=255)
                                       tAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAt                                                             >  2:1282567/1‑100 (MQ=255)
                                        aaTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGTCTGCATCCGGTAATCAATGTCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAtt                                                            <  2:2131593/100‑1 (MQ=255)
                                         aaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgttccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTg                                                           >  1:1234684‑M1/59‑100 (MQ=255)
                                         aTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTg                                                           >  2:929041/1‑100 (MQ=255)
                                          ttCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGc                                                          >  1:1676270/1‑100 (MQ=255)
                                            cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                        >  1:1629103/1‑100 (MQ=255)
                                            cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGAGTCTTATCAGACCTGGAGCAATTGCCa                                                        >  2:793385/1‑100 (MQ=255)
                                              ttattTCGCCTGCCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCaaa                                                      <  2:2952781/100‑1 (MQ=255)
                                               tattTCGTCTTGCTTATCAGTTCGCGTGTAGTCTGCATCCGTTAATCAATGCCTGATGCGACTCTTTCGCGTTTTATCAGACCTGGATCAATTGCCTAAt                                                     <  2:324263/100‑1 (MQ=25)
                                                 tttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGt                                                   >  1:2309499/1‑100 (MQ=255)
                                                 tttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAAACAATGCCTAATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGt                                                   >  1:1205055/1‑100 (MQ=255)
                                                  ttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTa                                                  <  2:2693268/100‑1 (MQ=255)
                                                    cGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAgg                                                >  2:1137085/1‑100 (MQ=255)
                                                     gtcTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATTAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGc                                               <  1:3694507/98‑1 (MQ=255)
                                                     gCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAgg                                                >  1:1025124/1‑99 (MQ=255)
                                                       cTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCACGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGc                                               >  1:3606964/1‑98 (MQ=255)
                                                       cTGGCTTATCAGTCCGCGTGTAGGCTGCATACGGTAATCAATGCCTGATGCGACGCTATCGCGTCTTATCACACCTGGAGCAATTGCCAAATGGAg                                                 >  2:3804400/1‑96 (MQ=37)
                                                        ttgCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCgg                                            <  1:954544/98‑1 (MQ=255)
                                                         ggCTTATCAGTCCGCGTGTAGGCTGCATCCGCTAATCCATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGa                                           <  2:2638745/100‑1 (MQ=255)
                                                           cTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATa                                         >  1:2245297/1‑100 (MQ=255)
                                                             tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGAtgcg                                       >  2:3601498/1‑97 (MQ=255)
                                                             tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAg                                       >  2:2286198/1‑100 (MQ=255)
                                                             tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAg                                       >  1:3082597/1‑100 (MQ=255)
                                                              aTCAGTCCGCGTTTAGGCTGCATCCTGTAATCAATGGCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAgg                                      <  1:1143855/100‑1 (MQ=255)
                                                                 aGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGt                                   >  1:1566279/1‑100 (MQ=255)
                                                                 aGTCCGCATGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGt                                   >  1:2057451/1‑100 (MQ=255)
                                                                  gTCCGCGTGTAGGATGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACATGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGtt                                  <  1:2762088/100‑1 (MQ=255)
                                                                   tCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATTAGACCTGGAGAAATTGCCAAATGTAGGCTGGATAAGGCGtct                                 <  1:2641285/100‑3 (MQ=37)
                                                                    ccGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTa                                >  1:1560157/1‑100 (MQ=255)
                                                                    ccGCGTGTAGGATGCATGCGGTAATCAATGACTTATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGttt                                 <  1:2783235/99‑1 (MQ=25)
                                                                     cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                               <  1:513742/100‑1 (MQ=255)
                                                                     cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                               <  2:507329/100‑1 (MQ=255)
                                                                       cgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGtaaacgc                             >  1:3218107/1‑94 (MQ=25)
                                                                       cgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgc                             >  2:3364826/1‑100 (MQ=255)
                                                                          gtAGGCTGCATCCGGTAATCAATGCCGGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgc                             <  2:2323370/97‑1 (MQ=255)
                                                                           tAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCTCGTCTTATCAGACCTAGAGCAATTACCAAATATAGGCCGGATAAGGCGTTTACGCCGCa                         >  1:3480692/1‑100 (MQ=25)
                                                                            aGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCAt                        >  1:1588163/1‑100 (MQ=255)
                                                                             ggCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCAt                        >  1:912953/1‑99 (MQ=255)
                                                                              gCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTAAACGCCTTATcc                      <  2:782898/100‑1 (MQ=21)
                                                                                 gCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                   >  1:3382055/1‑100 (MQ=255)
                                                                                 gCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                   <  2:1352747/100‑1 (MQ=255)
                                                                                  cATCCGGTAATCAATGCCTGCTGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                  >  2:2388842/1‑100 (MQ=255)
                                                                                  cATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcc                  <  2:3515184/100‑2 (MQ=21)
                                                                                    tCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAtt                <  2:1064382/100‑1 (MQ=255)
                                                                                     ccGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCGGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcc                  <  2:2504918/97‑2 (MQ=21)
                                                                                     ccGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAttt               >  1:3805870/1‑100 (MQ=255)
                                                                                      cGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTg              >  1:2189308/1‑100 (MQ=255)
                                                                                      cGGTAATCAATGCCTGATGAGACGCTGTCGCGTCTTATCAGACCTGGAGCGATTGCCAAATGTAAGCCGGATAAGGCGTTTACGCCGCCTCCAGCaat                >  2:2865785/1‑96 (MQ=21)
                                                                                       ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc             <  1:2077178/100‑1 (MQ=255)
                                                                                        gTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCt            <  2:1974586/100‑1 (MQ=255)
                                                                                         tAATCAATGCCTGATGCGCCGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCtt           >  1:243286/1‑100 (MQ=255)
                                                                                          aaTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTa          <  1:1293434/100‑1 (MQ=255)
                                                                                          aaTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTa          <  2:1566331/100‑1 (MQ=255)
                                                                                            tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc        <  2:3082569/100‑1 (MQ=255)
                                                                                            tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc        >  2:1013522/1‑100 (MQ=255)
                                                                                             cAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCt       <  1:469753/100‑1 (MQ=255)
                                                                                                  ccTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCagag  >  2:1744279/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
CCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAG  >  NC_000913/4460318‑4460515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.