New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627204139 (0.990)8 (0.060) 7/162 NT 6.0% coding (1293/1383 nt) radA DNA repair protein
?NC_000913 = 4627223 126 (0.990)coding (1312/1383 nt) radA DNA repair protein
Rejected: Frequency below cutoff threshold.

Only 100 of 207 total aligned reads displayed.

TGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATA  >  NC_000913/4627105‑4627303
                                                                                                   |                                                                                                   
tGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCG                                                                                                     <  2:593169‑M1/100‑1 (MQ=255)
tGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCG                                                                                                     >  1:3884011‑M1/1‑100 (MQ=255)
  aaGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCggcggc                                                                                                   <  1:284258/100‑1 (MQ=255)
  aaGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCggcggc                                                                                                   <  2:2058376/100‑1 (MQ=255)
   aGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCt                                                                                                  >  1:3907493/1‑100 (MQ=255)
   aGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCt                                                                                                  >  2:3301286/1‑100 (MQ=255)
    gTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTa                                                                                                 <  1:3912503/100‑1 (MQ=255)
    gTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAAAAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTa                                                                                                 >  1:104674/1‑100 (MQ=255)
      cGGGCTGGCCGGGGAGATACGCCCGGTGCCTCGCGGTCAGGAAAGAATATCTGAAGCGGCGAAACGCCGCTTTCGACGGGCGAGTGTTCAGGAGGCTaaa                                                                                               >  2:803908/1‑99 (MQ=255)
      cGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAAc                                                                                               >  1:73842/1‑100 (MQ=255)
      cGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTATGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAAc                                                                                               >  2:1536745/1‑100 (MQ=255)
       gggCTGGCAGGGGAGATCCGCCCGGTGCCCAGTGGTCAGTAAGGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACg                                                                                              <  2:2751534/100‑1 (MQ=255)
       gggCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGATTTTCGCCGGGCGATTGTTCCGGCAGCTAACg                                                                                              >  1:1862033/1‑100 (MQ=255)
       gggCTGGCAGGGGAGATCCGCCAGATGCCCATCGGTCAGTAACGAGTCTCTGAATCTGCGAAACACGGGTTTCGCCGGGCGATTATTCAGGTGGCTAAc                                                                                               >  2:2276631/1‑99 (MQ=255)
         gCTGGCAGGGGAGATCCGCCCGGTGTTTAGCGGTTAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTg                                                                                            <  1:991812/100‑1 (MQ=255)
           tGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGcc                                                                                          >  1:145512/1‑100 (MQ=255)
            gggaGGGGAGATCCGCCCGGGGCCCAGCCGGCAGGAACGAATCACTGAAGCGGCGAAGCGCGGTTTTCGCCGTGCGATTGTTCCGGCGGCTAACGTGcc                                                                                          <  2:3093941/96‑1 (MQ=255)
            ggCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCg                                                                                         >  2:3037788/1‑100 (MQ=255)
            ggCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCg                                                                                         >  1:2726834/1‑100 (MQ=255)
            ggCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGATTTTCGCCGGGCGATTGTTCCGGCGGCTAACTTGCCg                                                                                         >  1:1644950/1‑100 (MQ=255)
            ggCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGACGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCg                                                                                         >  1:1088327/1‑100 (MQ=255)
              cAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGaa                                                                                       >  2:1559503/1‑100 (MQ=255)
                ggggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGaaaa                                                                                     >  2:1914862/1‑100 (MQ=255)
                ggggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGaaaa                                                                                     >  2:2124281/1‑100 (MQ=255)
                ggggAGATCCGCCCGGTGCCCAACGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGaaaa                                                                                     >  2:1348790/1‑100 (MQ=255)
                 gggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGaaaaa                                                                                    >  1:2393445/1‑100 (MQ=255)
                 gggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGACGaaaaa                                                                                    >  1:3323302/1‑100 (MQ=255)
                 gggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGAGATTGTTCCGGCGGCTAACGTGCCGaaaaa                                                                                    >  2:916676/1‑100 (MQ=255)
                   gagaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAg                                                                                  <  1:486171/100‑1 (MQ=255)
                     natCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                <  2:1122345‑M2/99‑3 (MQ=255)
                     gaTCCGCCCGGTGCCCATCGTTCAGGAACGAATCTCTGAAGCGGCGAAACACGATTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGc                                                                                 <  2:3818428‑M2/99‑2 (MQ=255)
                     gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                <  2:2318961‑M2/100‑3 (MQ=255)
                     gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCAGGCGGCTAACGTGCCGAAAAAAGcg                                                                                <  2:382045‑M2/100‑3 (MQ=255)
                       tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgcc                                                                              <  1:1621159‑M1/100‑24 (MQ=255)
                       tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgcc                                                                              <  2:2910571‑M2/100‑5 (MQ=255)
                       tCCGCCCGCTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGATTAACGTGCCGAAAAAAGcgcc                                                                              <  2:2721512‑M2/100‑5 (MQ=255)
                        ccGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgcc                                                                              <  2:965728‑M1/99‑24 (MQ=255)
                         cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgccgg                                                                            <  1:1549004‑M1/100‑26 (MQ=255)
                         cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                            >  1:2250711‑M2/1‑94 (MQ=255)
                         cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                            <  2:3535421‑M2/100‑7 (MQ=255)
                          gCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGATAAAATGAAGAAAAAAGcgccg                                                                             >  2:3281689‑M2/1‑93 (MQ=255)
                           cccGTTGCCCAGCGGTCAGGAATTAATGTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgccggaa                                                                          <  1:1570882‑M1/100‑28 (MQ=255)
                             cGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgccggaaca                                                                        <  1:367437‑M1/100‑30 (MQ=255)
                             cGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAgg                                                                        <  2:1117704/100‑1 (MQ=255)
                              ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgccggaacaa                                                                       <  1:271563‑M1/100‑31 (MQ=255)
                                tGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGAt                                                                     <  1:3169502/100‑1 (MQ=255)
                                 gCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgccggaacaat                                                                      <  1:1557687‑M1/98‑32 (MQ=255)
                                 gCCCAGCGGTCAAGAACAAATATCTAAAGCAGCGAAACAAGGTTTTCGCCGGGCGATAGTTCCGGCGGCTAACGTGCAGAAAAAAGAGCCGGAAGGGATg                                                                    >  2:396284/1‑100 (MQ=255)
                                  cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAACCACGGTTTTCGCCGGACAATTATTCCGGCGGCTAACATGCCGAAAAAAGCGCCGGAAGGGATGc                                                                   >  1:1279090/1‑100 (MQ=255)
                                    cAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAg                                                                 >  2:3661270/1‑100 (MQ=255)
                                        ggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAttt                                                             >  1:3579851/1‑100 (MQ=255)
                                        ggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGAGCCGAAAAAAGCGCCGGAAGGGATGCAGAt                                                               >  1:3213807/1‑98 (MQ=255)
                                           cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATGTTTg                                                          >  2:3523535/1‑100 (MQ=255)
                                             ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                        <  1:3701638/100‑1 (MQ=255)
                                              ggaCGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                       <  2:3788440/98‑1 (MQ=255)
                                              gAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                       >  2:1582063/1‑100 (MQ=255)
                                                   aaTCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaa                                                  <  2:1769372/100‑1 (MQ=255)
                                                         tGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAActc                                            <  2:2679091/100‑1 (MQ=255)
                                                            cccggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                         >  2:2305283/3‑100 (MQ=255)
                                                            cccggcgAAAACCGTGTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACtctc                                          >  2:1465147/3‑99 (MQ=255)
                                                            aGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                         <  1:1582078/100‑1 (MQ=255)
                                                               ggcgAAACACTGTTTTCGCTGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCg                                        <  1:1522814/98‑1 (MQ=255)
                                                                gcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                     >  2:3323197/1‑100 (MQ=255)
                                                                 cgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgc                                    <  2:288859/100‑1 (MQ=255)
                                                                 ccaaaCACGGTTTTCGCCTGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                     <  1:1997352/97‑1 (MQ=255)
                                                                  gAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgcg                                   >  1:3802786/1‑100 (MQ=255)
                                                                   aaaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACgcgc                                  >  2:2360371/1‑100 (MQ=255)
                                                                    aaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCTAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCt                                 >  1:1181322/1‑100 (MQ=255)
                                                                     acacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCtt                                >  1:943574/1‑100 (MQ=255)
                                                                      cgatcttttCGCCGGGCTATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTa                               <  1:520470/95‑1 (MQ=255)
                                                                      cacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGAACCAAAAAGGATACAGATTATTGGCGTTAAAAAACTCTCCGACGCGCTTa                               >  1:67734/1‑100 (MQ=255)
                                                                        cGGTCTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGc                             <  2:3442677/100‑1 (MQ=255)
                                                                         ggctttCGCCGGGCGATTGTTCTGGTGGCTAATGTGTCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTACAAATCTCTCCGACGCGCTTAGCg                            <  2:1723384/97‑1 (MQ=255)
                                                                         ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                            <  1:2988807/100‑1 (MQ=255)
                                                                          gTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgt                           <  1:1536760/100‑1 (MQ=255)
                                                                          gTTTTCGCCGGGCGATTGTTACAGCGGCTAACGTGCCGAAAAACGCGCCGGAAGGGATGCAGATTTTTGGCGTCAAAAAACTCTCCGACGGGCTTAGCg                            >  2:3267012/1‑99 (MQ=255)
                                                                            tttCGCCGTGTGATTGTTCCGGCGGCTAACGTGACGAAAATTGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAg                              <  1:2565917/95‑1 (MQ=255)
                                                                            tttCGCCGGGCTATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTaagatcg                         >  2:520463/1‑94 (MQ=255)
                                                                             ttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGtt                        >  2:3084862/1‑100 (MQ=255)
                                                                             ttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGtt                        <  2:2740694/100‑1 (MQ=255)
                                                                              tCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTc                       <  2:1644935/100‑1 (MQ=255)
                                                                                gCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGACGATTTTTCGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcga                     >  2:756023/1‑100 (MQ=255)
                                                                                  cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                   <  1:1986919/100‑1 (MQ=255)
                                                                                  cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                   <  1:3037815/100‑1 (MQ=255)
                                                                                  cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                   >  1:1408601/1‑100 (MQ=255)
                                                                                    ggtgATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAATCTCTCCGTCGCGCTTAGCGTGTTcgac                    <  2:1171948/94‑1 (MQ=255)
                                                                                     gCGATTGTTCCGGCGTCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACt                <  1:2910597/100‑1 (MQ=255)
                                                                                         ttGTTCCGTCGGCTAGCGTGTCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtata            <  2:465234/100‑1 (MQ=255)
                                                                                           gTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgg          <  2:2437344‑M2/100‑73 (MQ=255)
                                                                                           gTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAATGCATGCAGATTTTTGGCGTTAAAAAACTCTCCGTCGCGCTTAGCGTGTTCGACGACTTATAAt          <  2:1041989/100‑1 (MQ=255)
                                                                                            ttCCGGCGGCTAACGTGTCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATg         <  1:397538/100‑1 (MQ=255)
                                                                                             tCCGGCGGCTAAAATGACGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga        <  2:1383841/100‑1 (MQ=255)
                                                                                              ccGGCGcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcg       >  2:3554115‑M1/1‑6 (MQ=255)
                                                                                              ccGGCGcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcg       <  2:325952‑M1/100‑95 (MQ=255)
                                                                                               cggcgtCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgaga      <  2:1607900/100‑1 (MQ=255)
                                                                                               cGGCGcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgcgcaccgggcgg      >  1:1338409‑M1/1‑5 (MQ=255)
                                                                                                ggCGcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcgga     <  2:41626‑M1/100‑97 (MQ=255)
                                                                                                  cgcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcggatc   <  1:3211284‑M1/100‑99 (MQ=255)
                                                                                                   ggcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGAtata  >  2:970722/1‑100 (MQ=255)
                                                                                                   gcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcggatct  <  1:1969363‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
TGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATA  >  NC_000913/4627105‑4627303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.