New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627204139 (0.990)8 (0.060) 7/162 NT 6.0% coding (1293/1383 nt) radA DNA repair protein
?NC_000913 = 4627223 126 (0.990)coding (1312/1383 nt) radA DNA repair protein
Rejected: Frequency below cutoff threshold.

Only 100 of 163 total aligned reads displayed.

GAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCGT  >  NC_000913/4627124‑4627321
                                                                                                   |                                                                                                  
  natCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                  <  2:1122345‑M2/99‑3 (MQ=255)
  gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                  <  2:2318961‑M2/100‑3 (MQ=255)
  gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCAGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                  <  2:382045‑M2/100‑3 (MQ=255)
    tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgcc                                                                                                <  2:2910571‑M2/100‑5 (MQ=255)
     ccGCCCGGTGCGCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccg                                                                                               >  1:1338409‑M2/1‑95 (MQ=255)
      cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                                              <  2:3535421‑M2/100‑7 (MQ=255)
      cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                                              >  2:3554115‑M2/1‑94 (MQ=255)
      cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                                              <  2:325952‑M2/100‑7 (MQ=255)
      cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                                              >  1:2250711‑M2/1‑94 (MQ=255)
         ccGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAg                                                                                           >  2:3085644/1‑100 (MQ=255)
            gTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGa                                                                                        <  2:400728/100‑1 (MQ=255)
             tGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGAt                                                                                       <  1:3169502/100‑1 (MQ=255)
              gCCCAGCGGTCAAGAACAAATATCTAAAGCAGCGAAACAAGGTTTTCGCCGGGCGATAGTTCCGGCGGCTAACGTGCAGAAAAAAGAGCCGGAAGGGATg                                                                                      >  2:396284/1‑100 (MQ=255)
               cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAACCACGGTTTTCGCCGGACAATTATTCCGGCGGCTAACATGCCGAAAAAAGCGCCGGAAGGGATGc                                                                                     >  1:1279090/1‑100 (MQ=255)
               cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGc                                                                                     >  2:3294866/1‑100 (MQ=255)
                ccAGAGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCa                                                                                    <  2:110860/100‑1 (MQ=255)
                 cAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAg                                                                                   >  2:3661270/1‑100 (MQ=255)
                     ggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGAGCCGAAAAAAGCGCCGGAAGGGATGCAGAt                                                                                 >  1:3213807/1‑98 (MQ=255)
                     ggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTGTAGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAtt                                                                                >  2:1617702/1‑99 (MQ=255)
                        cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                            <  1:2990349/100‑1 (MQ=255)
                         aGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTgg                                                                           <  2:1593563/100‑1 (MQ=255)
                          ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                          >  1:2980783/1‑100 (MQ=255)
                           ggaCGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                                         <  2:3788440/98‑1 (MQ=255)
                           gAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                                         >  2:1582063/1‑100 (MQ=255)
                            aaCGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                                         <  1:3906261/99‑1 (MQ=255)
                              cGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTa                                                                      <  1:3796729/100‑1 (MQ=255)
                                aaTCTTTGAAGCGGCGTATCACTGTTCGTGCCGGGCGATTGTTCCGGCGGCTGAAGTGCAGAAATTAGCTCCGGAAAGGATGCAGATTTTGGGCGtt                                                                       <  2:934689/97‑1 (MQ=255)
                                  tctcTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaaaa                                                                  <  1:1963499/100‑1 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                                >  2:495120/1‑100 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                                <  1:495127/100‑1 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                                >  2:3427282/1‑100 (MQ=255)
                                      tGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAActc                                                              <  2:2679091/100‑1 (MQ=255)
                                       gaggtggcgAAACCGGGGTTTGGGCAGGCGATTGTTCCGGAGGCTAACGTGCCGAAAAAAGAGCCGGAAGGGATGCAGATTTTTGGCGTGAAAAAtctc                                                              <  2:2093133/94‑1 (MQ=255)
                                       gAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGACTTTTGGCGTTAAAAAActct                                                             >  2:2820538/1‑100 (MQ=255)
                                        aaGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACtctc                                                            <  2:3063114/100‑1 (MQ=255)
                                         cccggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                                           >  2:2305283/3‑100 (MQ=255)
                                         cccggcgAAAACCGTGTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACtctc                                                            >  2:1465147/3‑99 (MQ=255)
                                         aGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                                           <  1:1582078/100‑1 (MQ=255)
                                            ggcgAAACACTGTTTTCGCTGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCg                                                          <  1:1522814/98‑1 (MQ=255)
                                            ggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAc                                                        >  2:1041393/1‑100 (MQ=255)
                                             gcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                                       >  2:3323197/1‑100 (MQ=255)
                                             gcgAAACACGATTTTCGGCGGGGGATTGTTTCGGCGTTTATCGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                                       <  1:240730/100‑1 (MQ=255)
                                              cgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGTTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgc                                                      <  1:3206756/100‑1 (MQ=255)
                                              ccaatcacGGTTTTCGCCGGACAATTGTTCCGGCGGCTAACGTGCCGAAAAATGCGCCGGTAGGGCTCCAGCTTTTTGGCGTTAAAAAACTCTCCGaag                                                       >  2:894996/6‑97 (MQ=255)
                                              ccaaaCACGGTTTTCGCCTGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                                       <  1:1997352/97‑1 (MQ=255)
                                               gAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgcg                                                     >  1:3802786/1‑100 (MQ=255)
                                               gAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgcg                                                     <  1:700146/100‑1 (MQ=255)
                                                aaaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACgcgc                                                    >  2:2360371/1‑100 (MQ=255)
                                                 aaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCTAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCt                                                   >  1:1181322/1‑100 (MQ=255)
                                                 aaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACgcgc                                                    >  2:5926/1‑99 (MQ=255)
                                                  acacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCtt                                                  >  1:943574/1‑100 (MQ=255)
                                                   cacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGAACCAAAAAGGATACAGATTATTGGCGTTAAAAAACTCTCCGACGCGCTTa                                                 >  1:67734/1‑100 (MQ=255)
                                                      ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                              <  2:135695/100‑1 (MQ=255)
                                                      ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                              <  2:16725/100‑1 (MQ=255)
                                                      ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATACAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                              >  1:3085150/1‑100 (MQ=255)
                                                       gTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgt                                             <  1:1536760/100‑1 (MQ=255)
                                                       gTTTTCGCCGGGCGATTGTTACAGCGGCTAACGTGCCGAAAAACGCGCCGGAAGGGATGCAGATTTTTGGCGTCAAAAAACTCTCCGACGGGCTTAGCg                                              >  2:3267012/1‑99 (MQ=255)
                                                         tttCGCCGGGCTATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTaagatcg                                           >  2:520463/1‑94 (MQ=255)
                                                          ttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGtt                                          <  2:2740694/100‑1 (MQ=255)
                                                           tCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTc                                         <  1:3661309/100‑1 (MQ=255)
                                                             gCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGACGATTTTTCGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcga                                       >  2:756023/1‑100 (MQ=255)
                                                              ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgac                                      >  2:3488161/1‑100 (MQ=255)
                                                              ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgac                                      <  1:1745081/100‑1 (MQ=255)
                                                               cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                     >  1:1408601/1‑100 (MQ=255)
                                                               cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                     <  1:3037815/100‑1 (MQ=255)
                                                               cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                     <  1:1986919/100‑1 (MQ=255)
                                                               cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTAAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                     <  2:1682165/100‑1 (MQ=255)
                                                                 ggtgATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAATCTCTCCGTCGCGCTTAGCGTGTTcgac                                      <  2:1171948/94‑1 (MQ=255)
                                                                 ggCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCgacgac                                   <  1:3921719/100‑1 (MQ=255)
                                                                  gCGATTGTTCCGGCGTCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACt                                  <  1:2910597/100‑1 (MQ=255)
                                                                     aTTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtat                               <  1:3238567/100‑1 (MQ=255)
                                                                     aTTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtat                               >  1:236281/1‑100 (MQ=255)
                                                                      ttGTTCCGTCGGCTAGCGTGTCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtata                              <  2:465234/100‑1 (MQ=255)
                                                                      ttGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcacc                              <  1:271563‑M2/100‑71 (MQ=255)
                                                                       tGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccg                             <  1:367437‑M2/100‑72 (MQ=255)
                                                                         ttCCGGCGGCTAACGTGTCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATg                           <  1:397538/100‑1 (MQ=255)
                                                                         ttCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagacattaattcctgaccgctgggcaacggg                           <  1:1570882‑M2/100‑74 (MQ=255)
                                                                          tCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                          >  2:2158285/1‑100 (MQ=255)
                                                                          tCCGGCGGCTAAAATGACGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                          <  2:1383841/100‑1 (MQ=255)
                                                                           ccGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcg                         <  1:1549004‑M2/100‑76 (MQ=255)
                                                                                ggcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGAtata                    >  2:970722/1‑100 (MQ=255)
                                                                                 gcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATAc                   >  1:1037452/1‑100 (MQ=255)
                                                                                   tAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACgg                 >  2:1759846/1‑100 (MQ=255)
                                                                                    aaCGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACg                  <  1:2870182/98‑1 (MQ=255)
                                                                                     aCGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggag               <  1:1023846/100‑1 (MQ=255)
                                                                                      cGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggagg              >  2:2788596/1‑100 (MQ=255)
                                                                                        tGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggaggga            >  2:3556961/1‑100 (MQ=255)
                                                                                        tGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggaggga            <  1:620723/100‑1 (MQ=255)
                                                                                         gCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTTGCGTTAAAAATCTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggagggag           <  2:3731498/100‑1 (MQ=255)
                                                                                         gCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGATATATAAggaggtag           >  1:3526770/1‑100 (MQ=255)
                                                                                         gCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggagggag           <  1:2880116/100‑1 (MQ=255)
                                                                                          ccGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGgaga          <  2:617959/100‑1 (MQ=255)
                                                                                           cGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGat         >  1:2370396/1‑100 (MQ=255)
                                                                                            gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGATTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata        >  1:1082961/1‑100 (MQ=255)
                                                                                             aaaaaaGCGCCTGAATGTATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGgaga          <  1:2738460/97‑1 (MQ=255)
                                                                                             aaaaaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGatat       >  2:353986/1‑100 (MQ=255)
                                                                                               aaaaGCGCCGGAATGTATGCAGATTTTTGGTGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTGATAATGAGATATACGGAGGGAGATATg      <  1:1643091/99‑1 (MQ=255)
                                                                                                aaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtc    <  2:1005346/100‑1 (MQ=255)
                                                                                                aaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgt     <  1:857439/99‑1 (MQ=255)
                                                                                                  aGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGCTATgtcgt  >  2:2689220/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
GAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCGT  >  NC_000913/4627124‑4627321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.