New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4629468114 (0.820)5 (0.040) 4/162 NT 4.5% coding (1055/1668 nt) ettA energy‑dependent translational throttle A
?NC_000913 = 4629480 111 (0.870)coding (1043/1668 nt) ettA energy‑dependent translational throttle A
Rejected: Frequency below cutoff threshold.

Only 100 of 159 total aligned reads displayed.

GTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCC  >  NC_000913/4629369‑4629566
                                                                                                   |                                                                                                  
gtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGA                                                                                                    >  1:2239562‑M1/1‑100 (MQ=255)
 tttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCGCCGTTCGGACCGATGATCCcgac                                                                                                   <  2:245604/100‑1 (MQ=255)
     accCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATc                                                                                               >  2:2963757/1‑100 (MQ=255)
     accCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATc                                                                                               <  1:1627973/100‑1 (MQ=255)
      cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                                                                                              >  1:116269/1‑100 (MQ=255)
      cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                                                                                              >  1:43429/1‑100 (MQ=255)
       ccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGc                                                                                             >  2:1247534/1‑100 (MQ=255)
        cAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCt                                                                                            >  2:2193009/1‑100 (MQ=255)
         aacgTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCTGACCGATGATCCCGACGATCGCTc                                                                                           <  2:3741613/97‑1 (MQ=255)
          aaGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTcc                                                                                          <  1:2401903/100‑1 (MQ=255)
          aaGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTcc                                                                                          <  1:1376889/100‑1 (MQ=255)
           aGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCt                                                                                         >  1:2924113/1‑100 (MQ=255)
                tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgg                                                                                    >  1:2343484‑M2/1‑96 (MQ=255)
                 ggTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcggg                                                                                   >  1:179642‑M2/1‑95 (MQ=255)
                 ggTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTGGCggg                                                                                   <  2:913884/100‑1 (MQ=255)
                   tGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgggat                                                                                 <  1:2329050‑M2/100‑8 (MQ=255)
                   tGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgggat                                                                                 <  2:2240137‑M2/100‑8 (MQ=255)
                   tGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgggat                                                                                 <  2:1247641‑M2/100‑8 (MQ=255)
                    gCCGCTGTCCGGCTGTCGCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgggatc                                                                                >  2:1537037‑M2/1‑92 (MQ=255)
                     ccGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCg                                                                               <  1:3528688/100‑1 (MQ=255)
                      cGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGAaaggagcgatcgtcgggatcat                                                                              <  1:1968221‑M1/100‑23 (MQ=255)
                      cGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCga                                                                              <  1:2822513/100‑1 (MQ=255)
                         tGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGaa                                                                           <  2:358637/100‑1 (MQ=255)
                          gTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAg                                                                          <  2:2439929/100‑1 (MQ=255)
                            ccGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGAACCGCTGATCCCGACGATCGCTCCTTTCGAGATCGAGAAGCt                                                                        >  2:2743146/1‑100 (MQ=255)
                            caagCTGTTCCTGACAAGAGATCAAACGGAACAGGGTCGATTTAACCGCACCGTTCGGACCGGTGATCGCGACGCTCACTCCTTTCGGGATCGAGaa                                                                           >  2:2643009/4‑97 (MQ=255)
                              ggCTGTTCCTGACCAGTGATCATACGGAACAGGGTCGATTTACCCGCACCCTTGGGACTGATGATCCCTATGATCGCGCCGTTCGGTATCgtgagtc                                                                         >  2:1295430/1‑94 (MQ=255)
                              ggCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGAACCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCa                                                                      <  2:1468809/100‑1 (MQ=255)
                                 tGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAgg                                                                    >  1:1469769/1‑99 (MQ=255)
                                  gTTCCTGACCACAAATCATACTGAACAGCGTCGATTTACCCGCACCGTTCGGACCGACGTTCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtc                                                                  <  2:3896033/100‑1 (MQ=255)
                                     ccTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc                                                               >  1:883342/1‑100 (MQ=255)
                                      cTGACCAGAGATCATACGGAACAGGGACGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTATCGGGATAGAGCAGCTCAGAtcata                                                               >  2:3254360/1‑98 (MQ=255)
                                       tGATCAGAGATCATACGCAACAGGGTCGATTTACACGCACCGTTCGGACCGATGATCCCGACCATCGCTCCTTTCGGGATCGAGAAGCTCAGGtcatc                                                               <  2:344243/98‑1 (MQ=255)
                                       tGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCatcaa                                                             <  2:871946/100‑1 (MQ=255)
                                       tGACCAGAGATCATACGGAACAGGGTCGACCTACCCGCACCGTTCGGACCGATTATCCCGACTATCGCTCCTTTCGGTATCGAGAAGCTCAGGTCatcaa                                                             <  2:2411550/100‑1 (MQ=255)
                                        gACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCatcaat                                                            >  1:3427875/1‑100 (MQ=255)
                                          ccAGAGATCATACGGAACAGGGTCGATTTACCCGCTCTGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCatcaatca                                                          <  1:1552557/100‑1 (MQ=255)
                                          ccAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTTCTTTCGGGATCGAGAAGCTCAGGTCatcaatca                                                          >  1:978185/1‑100 (MQ=255)
                                           cAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcag                                                         <  1:2278340/100‑1 (MQ=255)
                                             gagaTCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcagca                                                       <  2:1455394/100‑1 (MQ=255)
                                              agaTCATACGGAACAGGATCGATTTACCCGCACCGTTCGGACCGACGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcagcag                                                      >  2:1747849/1‑100 (MQ=255)
                                               gaTCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGa                                                     >  2:3855260/1‑100 (MQ=255)
                                                  cATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGa                                                  >  2:1689626/1‑100 (MQ=255)
                                                  cATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGa                                                  >  2:2134670/1‑100 (MQ=255)
                                                    tACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc                                                >  2:2829598/1‑100 (MQ=255)
                                                    tACGCAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc                                                <  2:1680313/100‑1 (MQ=255)
                                                     acgtgaCAGGGTCGATTTACCCGAACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGTATCGATAAGCTCAGGTCACCAATcagca                                                       <  2:3794895/87‑1 (MQ=255)
                                                     aCGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc                                                >  2:2378275/1‑99 (MQ=255)
                                                           cAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTACGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGTCATa                                          <  2:669557/99‑1 (MQ=255)
                                                           cAGGGTCGATCTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAg                                         <  2:2570048/100‑1 (MQ=255)
                                                             gggTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGa                                       >  1:3765944/1‑100 (MQ=255)
                                                              ggTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGAt                                      >  1:1221905/1‑100 (MQ=255)
                                                              atctgATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGAt                                      <  1:2595705/96‑1 (MQ=255)
                                                               gTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGAtt                                     <  1:1541255/100‑1 (MQ=255)
                                                                 cGATTTACCCGCACCGTTCGGACCGATGATCCCGACGTTCTCTCCTTTCTGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTa                                   <  1:3089355/100‑1 (MQ=255)
                                                                 cGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTa                                   <  1:134882/100‑1 (MQ=255)
                                                                  gATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGAtagat                                  >  2:2595681/1‑96 (MQ=255)
                                                                  gATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTAc                                  >  1:593560/1‑100 (MQ=255)
                                                                   aTTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACg                                 <  1:3202467/100‑1 (MQ=255)
                                                                    tttACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACg                                 <  1:3490352/99‑1 (MQ=255)
                                                                    attACCCGCACCGTTCGGACCAATGAACCCGACGCTCGATCCTTTCGGGATCGAACAGCTCAGGCCATCAATCAGCAGACGATCACCATAGGATTTACg                                 >  2:960701/2‑99 (MQ=255)
                                                                     ttACCCGCACCGTTCGGACCGATGATCCCCACGATCGCTCCTTTCGCGATCGAGAAGCTCAGGTCATCAATCTGCAGACGATCGCCATAGGATTTACGCa                               <  2:112461/100‑1 (MQ=255)
                                                                      tACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAg                              <  1:2200922/100‑1 (MQ=255)
                                                                      tACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAg                              <  1:447965/100‑1 (MQ=255)
                                                                       ncccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAgg                             >  2:2334306/2‑100 (MQ=255)
                                                                        cccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAgg                             >  1:206349/1‑99 (MQ=255)
                                                                        cccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGt                            >  2:1239132/1‑100 (MQ=255)
                                                                         ccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGtt                           <  2:1394315/100‑1 (MQ=255)
                                                                         ccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGtt                           >  1:3900710/1‑100 (MQ=255)
                                                                              ccGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGa                      >  1:571101/1‑100 (MQ=255)
                                                                              ccGTTCGGACCGATGATCCCGACGATCGCTCCTGTCGGGATCGAGAAGCTCAGGTCATTAATCAGCAGACGATCGCCATAGGATTTACGCAGGTGGCTg                       <  2:2669702/99‑1 (MQ=255)
                                                                               cGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGAc                     <  1:1073563/100‑1 (MQ=255)
                                                                               cGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGAc                     <  1:589781/100‑1 (MQ=255)
                                                                                gTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGAc                     <  1:1073107/99‑1 (MQ=255)
                                                                                   cGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTcc                 >  2:419954/1‑100 (MQ=255)
                                                                                     gACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAg               <  1:2262782/100‑1 (MQ=255)
                                                                                      aCCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGc              >  2:588137/1‑100 (MQ=255)
                                                                                      aCCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGc              >  1:1993034/1‑100 (MQ=255)
                                                                                       ccGATGATCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgagtaaatcgaccctgttccgtatgatctctgatcaggaacagccggaca             <  1:1414738‑M2/100‑76 (MQ=255)
                                                                                       ccGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCa             >  2:441203/1‑100 (MQ=255)
                                                                                         gatgatCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagc           <  1:2010350‑M2/100‑78 (MQ=255)
                                                                                         gatgatCCCGACGATCGCTCCTTTCGGGATCGCGACGCTCAGGTCATCAATCAGCAGACGATCGCCATAGCAATTACGCAGGTTGCTGACTTCCAGCACt           >  1:1398284/1‑100 (MQ=255)
                                                                                          atgatCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagcg          <  1:1968221‑M2/100‑79 (MQ=255)
                                                                                          atgatCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagc           <  2:2574038‑M2/99‑78 (MQ=255)
                                                                                            gatCCCGAaaggcgcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggacaggaacagccggacagcggc        >  1:2457097‑M1/1‑8 (MQ=255)
                                                                                            gatCCCGAaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcagcgacagccggacagcggc        >  2:1537037‑M1/1‑8 (MQ=255)
                                                                                            gatCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagcggc        <  1:604187‑M2/100‑81 (MQ=255)
                                                                                            gatCCCGACGATCGCTCCGTTCGGGATCGATAAGCTCAGGTCATCAATCAGCATACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCAcgt          <  2:3913507/98‑3 (MQ=255)
                                                                                             atCCCGAaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagcggca       <  2:2240137‑M1/100‑94 (MQ=255)
                                                                                             atCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCACCAGACGATCGCCATAGGATTAACGCAGGTAGCAGACTTCCAGCAATTTa        >  1:690433/1‑99 (MQ=255)
                                                                                               cccGAaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagcggcacc     >  2:591031‑M1/1‑5 (MQ=255)
                                                                                               cccGAaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagcggcacc     >  1:179642‑M1/1‑5 (MQ=255)
                                                                                               cccGAaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagacggacagcggcac      >  1:826033‑M1/1‑5 (MQ=255)
                                                                                               cccGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCg     <  1:3574620/100‑1 (MQ=255)
                                                                                                ccGAaaggagtgatcgtcgggatcatcggtccgaacggtgcgtgtaaatcgaccctgttccgtatgatttctggtcaggaacagccggacagcggcacca    <  2:3262296‑M1/100‑97 (MQ=255)
                                                                                                ccGAaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagcggcacca    >  1:2343484‑M1/1‑4 (MQ=255)
                                                                                                ccGAaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagcggcacca    >  1:5867‑M1/1‑4 (MQ=255)
                                                                                                ccGACGATCTCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCgn    <  2:3695281/100‑2 (MQ=255)
                                                                                                ccGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGc    >  2:628243/1‑100 (MQ=255)
                                                                                                  gacgaTCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGccc  <  2:3359606/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCC  >  NC_000913/4629369‑4629566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.