BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4629468	114 (0.820)	5 (0.040)	4/162	NT	4.5%	coding (1055/1668 nt)	ettA	energy‑dependent translational throttle A
*	?	NC_000913	= 4629480	111 (0.870)	5 (0.040)	4/162	NT	4.5%	coding (1043/1668 nt)	ettA	energy‑dependent translational throttle A
Rejected: Frequency below cutoff threshold.

Only 100 of 142 total aligned reads displayed.

TGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCA  >  NC_000913/4629385‑4629578

tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgg                                                                                                >  1:2343484‑M2/1‑96 (MQ=255)

tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAAATCATACGGAACAGGGTCGATTTACACGCACCGTTCGGACCGATGATCCCGACGATCACTCCTTtcgg                                                                                                <  2:3262296‑M2/100‑5 (MQ=255)

 ggTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcggg                                                                                               >  2:591031‑M2/1‑95 (MQ=255)

 ggTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTGGCggg                                                                                               <  2:913884/100‑1 (MQ=255)

  gTGCCGCTGTCCGTCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcggg                                                                                               >  1:826033‑M2/1‑94 (MQ=255)

   tGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgggat                                                                                             <  1:2329050‑M2/100‑8 (MQ=255)

   tGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgggat                                                                                             <  2:2240137‑M2/100‑8 (MQ=255)

    gCCGCTGTCCGGCTGTTCCTGTCCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCGCCTTtcgggatc                                                                                            >  1:2457097‑M2/1‑92 (MQ=255)

    gCCGCTGTCCGGCTGTCGCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTtcgggatc                                                                                            >  2:1537037‑M2/1‑92 (MQ=255)

      cGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCga                                                                                          >  1:3554787/1‑100 (MQ=255)

      cGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCga                                                                                          <  1:2822513/100‑1 (MQ=255)

       gCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCgag                                                                                         >  2:1016066/1‑100 (MQ=255)

         tGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGaa                                                                                       <  2:358637/100‑1 (MQ=255)

          gTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAg                                                                                      >  1:548300/1‑100 (MQ=255)

            ccGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGAACCGCTGATCCCGACGATCGCTCCTTTCGAGATCGAGAAGCt                                                                                    >  2:2743146/1‑100 (MQ=255)

            caagCTGTTCCTGACAAGAGATCAAACGGAACAGGGTCGATTTAACCGCACCGTTCGGACCGGTGATCGCGACGCTCACTCCTTTCGGGATCGAGaa                                                                                       >  2:2643009/4‑97 (MQ=255)

             cGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTAGGGATCGAAAAGc                                                                                     >  1:669565/1‑98 (MQ=255)

              ggCTGTTCCTGACCAGTGATCATACGGAACAGGGTCGATTTACCCGCACCCTTGGGACTGATGATCCCTATGATCGCGCCGTTCGGTATCgtgagtc                                                                                     >  2:1295430/1‑94 (MQ=255)

              ggCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGAACCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCa                                                                                  <  2:1468809/100‑1 (MQ=255)

              ggCTCTTCCTGACCAGAGATCATACGGAAGAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCGCGACGATCGCTCCTTTCGGGATCGAGAAGCTCa                                                                                  <  2:2347099/100‑1 (MQ=255)

               gCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAg                                                                                 <  2:3755263/100‑1 (MQ=255)

                 tGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAgg                                                                                >  1:1469769/1‑99 (MQ=255)

                  gTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtc                                                                              <  1:3847188/100‑1 (MQ=255)

                  gTTCCTGACCACAAATCATACTGAACAGCGTCGATTTACCCGCACCGTTCGGACCGACGTTCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGtc                                                                              <  2:3896033/100‑1 (MQ=255)

                       tGACCAGAGATCATACGGAACAGGGTCGACCTACCCGCACCGTTCGGACCGATTATCCCGACTATCGCTCCTTTCGGTATCGAGAAGCTCAGGTCatcaa                                                                         <  2:2411550/100‑1 (MQ=255)

                        gACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCatcaat                                                                        >  1:3427875/1‑100 (MQ=255)

                          ccAGAGATCATACGGAACAGGGTCGATTTACCCGCTCTGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCatcaatca                                                                      <  1:1552557/100‑1 (MQ=255)

                          ccAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTTCTTTCGGGATCGAGAAGCTCAGGTCatcaatca                                                                      >  1:978185/1‑100 (MQ=255)

                           cAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcag                                                                     <  1:2278340/100‑1 (MQ=255)

                           cAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcag                                                                     >  2:2696017/1‑100 (MQ=255)

                             gagaTCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcagca                                                                   <  2:1455394/100‑1 (MQ=255)

                             gagaTCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTACTTTCGGGATCGAGAAGCTCAGGTCATCAATcagca                                                                   >  1:1509340/1‑100 (MQ=255)

                              agaTCATACGGAACAGGATCGATTTACCCGCACCGTTCGGACCGACGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcagcag                                                                  >  2:1747849/1‑100 (MQ=255)

                               gaTCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGa                                                                 >  2:1708854/1‑100 (MQ=255)

                                  cATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGa                                                              >  2:2134670/1‑100 (MQ=255)

                                   aTACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGa                                                              >  1:2734125/1‑99 (MQ=255)

                                    tACGCAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc                                                            <  2:1680313/100‑1 (MQ=255)

                                     acgtgaCAGGGTCGATTTACCCGAACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGTATCGATAAGCTCAGGTCACCAATcagca                                                                   <  2:3794895/87‑1 (MQ=255)

                                     aCGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATc                                                            >  2:2378275/1‑99 (MQ=255)

                                     aCGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCg                                                           <  2:3860636/100‑1 (MQ=255)

                                        gAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATAAATCAGCAGACGAGCGCCa                                                        <  2:1366417/100‑1 (MQ=255)

                                           cAGGGTCGATCTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAg                                                     <  2:2570048/100‑1 (MQ=255)

                                            aGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGc                                                          <  2:2605497/94‑1 (MQ=255)

                                             gggTCGATTTTCCCGCACCGTTCGGATTGATGATTTTGATGATTGCTTTTTTTGGGATCGAGACGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGa                                                   <  1:1152894/100‑1 (MQ=255)

                                               gTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGAtt                                                 >  1:125292/1‑100 (MQ=255)

                                                 cGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTa                                               <  1:134882/100‑1 (MQ=255)

                                                  gATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTAc                                              >  1:593560/1‑100 (MQ=255)

                                                   aTTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACg                                             <  1:3202467/100‑1 (MQ=255)

                                                    tttACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACg                                             <  1:3490352/99‑1 (MQ=255)

                                                    tttACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGATCATCAATCAGCAGACGATCGCCATAGGATTTACg                                             >  1:347097/1‑99 (MQ=255)

                                                      tACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAg                                          <  1:2200922/100‑1 (MQ=255)

                                                       aCCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAgg                                         <  2:1672257/100‑1 (MQ=255)

                                                        cccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGt                                        >  2:1239132/1‑100 (MQ=255)

                                                         ccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGtt                                       <  2:1394315/100‑1 (MQ=255)

                                                         ccGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGtt                                       >  1:3900710/1‑100 (MQ=255)

                                                          cGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTg                                      >  2:2433177/1‑100 (MQ=255)

                                                              ccGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGa                                  >  1:571101/1‑100 (MQ=255)

                                                               cGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGAc                                 <  1:1073563/100‑1 (MQ=255)

                                                               cGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGAc                                 <  1:589781/100‑1 (MQ=255)

                                                                gTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGAc                                 <  1:1073107/99‑1 (MQ=255)

                                                                gTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACt                                >  2:3515085/1‑100 (MQ=255)

                                                                   cGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTcc                             <  2:2329028/100‑1 (MQ=255)

                                                                   cGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTcc                             >  2:419954/1‑100 (MQ=255)

                                                                    ggACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTcc                             <  2:2801210/99‑1 (MQ=255)

                                                                    ggACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCa                            >  2:3214293/1‑100 (MQ=255)

                                                                    ggACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCa                            <  1:1823323/100‑1 (MQ=255)

                                                                     gACCGATGATCCCGACTATCGCTCCTTTCGTTATCGTGAAGCTTAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTcc                             <  1:2077964/98‑1 (MQ=255)

                                                                     gACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAg                           >  1:1606105/1‑100 (MQ=255)

                                                                     gACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAg                           <  1:2262782/100‑1 (MQ=255)

                                                                     gACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAg                           >  2:929530/1‑100 (MQ=255)

                                                                      aCCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGc                          >  1:1993034/1‑100 (MQ=255)

                                                                      aCCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGc                          >  2:588137/1‑100 (MQ=255)

                                                                      aCCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGc                          <  1:2334328/100‑1 (MQ=255)

                                                                       ccGATGATCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgagtaaatcgaccctgttccgtatgatctctgatcaggaacagccggaca                         <  1:1414738‑M2/100‑76 (MQ=255)

                                                                       ccGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCa                         >  2:441203/1‑100 (MQ=255)

                                                                         gatgatCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagc                       <  1:2010350‑M2/100‑78 (MQ=255)

                                                                          atgatCCCGACGATCGCTCCTTtcgggatcatcggtccgaacggtgcgggtaaatcgaccctgttccgtatgatctctggtcaggaacagccggacagc                       <  2:2574038‑M2/99‑78 (MQ=255)

                                                                            gatCCCGACGATCGCTCCGTTCGGGATCGATAAGCTCAGGTCATCAATCAGCATACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCAcgt                      <  2:3913507/98‑3 (MQ=255)

                                                                             atCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCACCAGACGATCGCCATAGGATTAACGCAGGTAGCAGACTTCCAGCAATTTa                    >  1:690433/1‑99 (MQ=255)

                                                                              tCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATc                  >  1:392061/1‑100 (MQ=255)

                                                                               cccGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCg                 <  1:3574620/100‑1 (MQ=255)

                                                                                ccGACGATCTCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCgn                <  2:3695281/100‑2 (MQ=255)

                                                                                ccGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCg                 <  2:1170164/99‑1 (MQ=255)

                                                                                ccGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGc                >  2:628243/1‑100 (MQ=255)

                                                                                 cgacgaTCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGcc               >  1:198206/1‑100 (MQ=255)

                                                                                  gacgaTCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGccc              <  2:3359606/100‑1 (MQ=255)

                                                                                     gaTCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGa           >  2:234771/1‑100 (MQ=255)

                                                                                      aTCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGAc          <  2:2112527/100‑1 (MQ=255)

                                                                                      aTCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGATTGCTGACTTCCAGCACTTTATCGCCCAGAc          >  1:3332483/1‑100 (MQ=255)

                                                                                       tCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGAcg         >  1:3047325/1‑100 (MQ=255)

                                                                                          cTCCTTTCGGTATCGAGAAGCTCATGTCATCAATCAGCAGACGATCGCCATATGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCgg      <  1:2850585/100‑1 (MQ=255)

                                                                                          cTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGTCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCgg      <  1:3086533/100‑1 (MQ=255)

                                                                                          cTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCgg      >  1:2405892/1‑100 (MQ=255)

                                                                                          cTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCgg      >  2:2874077/1‑100 (MQ=255)

                                                                                           tCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGTCTTCCAGCACTTTATCGCCCAGACGCGGt     <  2:608547/100‑1 (MQ=255)

                                                                                             cTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTcc   >  2:2241694/1‑100 (MQ=255)

                                                                                             cTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTcc   >  1:1936058/1‑100 (MQ=255)

                                                                                              tttCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATTGTTATATGATTTACGTAGGTTGCTGACTTCCAGTTCTTTATCGCCCAGATGCGGTcc   <  2:386071/99‑1 (MQ=255)

                                                                                              tttCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCa  >  2:838259/1‑100 (MQ=255)

                                                                                              tttCGGGATCGAGAAGCTCAAGACATAAATAAGCAGACGATCGCCATAGGATTTAAGCAGGTTGATAAATTCCAGCACTTAATAGCCCAGACGCGGTc    >  2:842003/1‑98 (MQ=255)

TGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCA  >  NC_000913/4629385‑4629578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.