New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 762891NA (NA)5 (0.040) 5/164 NT NA noncoding (130/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 762924 NA (NA)noncoding (163/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 183 total aligned reads displayed.

CGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGA  >  NC_000913/762792‑762990
                                                                                                   |                                                                                                   
cGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGAt                                                                                                     >  1:109204/1‑100 (MQ=255)
cGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGAt                                                                                                     >  1:3392799/1‑100 (MQ=255)
cGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGAGAt                                                                                                     >  2:2257543/1‑100 (MQ=255)
 ggCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGAt                                                                                                     >  1:2861727/1‑99 (MQ=255)
 ggCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATg                                                                                                    >  2:2106087‑M1/1‑99 (MQ=255)
   cAATTGAAGCCTTATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcc                                                                                                  <  1:3490717‑M1/100‑4 (MQ=255)
   cAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcc                                                                                                  <  2:908811‑M1/100‑4 (MQ=255)
   cAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcc                                                                                                  <  1:3910953‑M1/100‑4 (MQ=255)
      ttGATGTCTGATGTGACGTTTACGTGTCTTATCAGGCTTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATg                                                                                                    <  1:1630363‑M1/95‑2 (MQ=255)
        gAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtg                                                                                             >  1:3144214/1‑100 (MQ=255)
        gAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtg                                                                                             <  1:1800535/100‑1 (MQ=255)
         aggCCTGATAAGACGCGTAAGCGTCGCATCAGGCCTACATGACCAAAAATGGAGGTCGGATAAGGCGCCAGCGCCGCATCGGGCAAGCGATGCCGGAt                                                                                              >  2:2416593/3‑98 (MQ=9)
         acgCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATACCTGAtgt                                                                                            >  2:2684566/3‑100 (MQ=255)
         aaGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtgt                                                                                            >  2:1973791/1‑100 (MQ=255)
          aGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtgtg                                                                                           >  2:1701943/1‑100 (MQ=255)
            ncTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGAc                                                                                         >  2:2834851/2‑100 (MQ=255)
            ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGAc                                                                                         <  2:2735057/100‑1 (MQ=255)
             cTGATGCGACGCTGAGGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACg                                                                                        <  1:3875835/100‑1 (MQ=255)
             cTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACg                                                                                        >  2:1400901/1‑100 (MQ=255)
              tGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGt                                                                                       >  2:1825322/1‑100 (MQ=255)
              tGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGt                                                                                       >  1:1604598/1‑100 (MQ=255)
               gATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGtt                                                                                      <  2:2511473/100‑1 (MQ=255)
                   cGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAAc                                                                                  >  1:3231200/1‑100 (MQ=255)
                    ggcGCTCACGCGTCTTATCAGGACAACGGGAACACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATTCTACAAGCGATGCCTTATATTACTATTAACg                                                                                 >  2:1375118/3‑100 (MQ=25)
                    gACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACg                                                                                 >  1:2872675/1‑100 (MQ=255)
                      cGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCAATGCCTGATGTGACGTTTAACgtg                                                                               >  1:1871634/1‑100 (MQ=255)
                        cTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTc                                                                             <  2:1328931/100‑1 (MQ=255)
                         tGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTTATGTGACGTTTAACGTGTCt                                                                            <  2:836377/100‑1 (MQ=255)
                          gACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCtt                                                                           >  1:2911021/1‑100 (MQ=255)
                           aCGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTA                                                                          <  2:1192140‑M2/100‑1 (MQ=255)
                             gcgTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATC                                                                        >  2:2321887‑M2/1‑100 (MQ=255)
                               gTCTTATCAGGCCTACGGGCCCACAAATGGAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAG                                                                      >  2:1569978‑M2/1‑100 (MQ=255)
                                 cTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGC                                                                    >  2:2601155‑M2/1‑100 (MQ=255)
                                  ttATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGcc                                                                   <  1:2979934/100‑1 (MQ=255)
                                   tATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcat                                                                  <  1:1004204‑M1/100‑36 (MQ=255)
                                   tATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCt                                                                  >  1:891755/1‑100 (MQ=255)
                                    aTCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatc                                                                 <  1:2919204‑M1/100‑37 (MQ=255)
                                      cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACg                                                               >  1:3902100/1‑100 (MQ=255)
                                      cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACg                                                               <  1:3079552/100‑1 (MQ=255)
                                      cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACg                                                               <  1:1300797/100‑1 (MQ=255)
                                      cAGACCTACGGGACCACCAATGTATGTGGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatcg                                                                <  1:1296243‑M1/99‑38 (MQ=255)
                                       aGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatcgct                                                              <  1:1120164‑M1/100‑40 (MQ=255)
                                       aGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACgg                                                              <  1:2074835/100‑1 (MQ=255)
                                        ggCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggg                                                             >  1:1989289/1‑100 (MQ=255)
                                        ggCATACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggg                                                             <  2:2056328/100‑1 (MQ=255)
                                         gCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGt                                                            >  1:2826065/1‑100 (MQ=255)
                                           cTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTATTATCAGGCCTACGGGTGa                                                          >  1:902497/1‑100 (MQ=255)
                                             aCGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAcc                                                        <  2:3335100/100‑1 (MQ=255)
                                             aCGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAcc                                                        <  1:1045492/100‑1 (MQ=255)
                                             aCGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAcc                                                        <  2:3123063/100‑1 (MQ=255)
                                                 gACCACCAATGTAGGTCGGATAAGACGAAAGCGCCGCATCCGACAAGAGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACa                                                    >  2:1940440/1‑100 (MQ=255)
                                                  accaccAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACaa                                                   >  2:404222/1‑100 (MQ=255)
                                                   ccaccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAAt                                                  >  2:391401/1‑100 (MQ=255)
                                                   ccaccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAAt                                                  >  2:3242732/1‑100 (MQ=255)
                                                     accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATTCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACaa                                                   <  1:3674509/97‑1 (MQ=255)
                                                     accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGc                                                <  2:1903102/100‑1 (MQ=255)
                                                     accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGc                                                >  2:1436432/1‑100 (MQ=255)
                                                     accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCATGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGc                                                >  2:1714151/1‑100 (MQ=255)
                                                      ccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGcc                                               >  1:1375622/1‑100 (MQ=255)
                                                      ccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGcc                                               >  1:1759685/1‑100 (MQ=255)
                                                       caATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGAAGTTTAACGTGTCTTATAAAGCCTACGGGTGACCGACAATGccc                                              >  1:2725024/1‑100 (MQ=255)
                                                         aTGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCgg                                            <  2:3181537/100‑1 (MQ=255)
                                                          tGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGa                                           <  1:379258/100‑1 (MQ=255)
                                                           gTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGaa                                          <  2:1224827/100‑1 (MQ=255)
                                                             aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCTGGCCTACTGTTGACCGACAATGCCCGGAAg                                         <  2:1078713/99‑1 (MQ=255)
                                                             aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGc                                        <  1:511687/100‑1 (MQ=255)
                                                              ggTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCg                                       <  1:802064/100‑1 (MQ=255)
                                                                  ggATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATAc                                   >  1:3345808/1‑100 (MQ=255)
                                                                  ggATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGACCGGAAGCGATAc                                   >  2:3612111/1‑100 (MQ=255)
                                                                   gATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACg                                  >  2:3590631/1‑100 (MQ=255)
                                                                    aTAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGa                                 >  1:3712674/1‑100 (MQ=255)
                                                                        ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAata                             >  2:1676704/1‑100 (MQ=255)
                                                                          cgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATAtt                           >  1:1916704/1‑100 (MQ=255)
                                                                          cgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATAtt                           >  2:2451227/1‑100 (MQ=255)
                                                                          cgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCCATACGAAATAtt                           >  2:2968798/1‑100 (MQ=255)
                                                                            cAAGCGCCGCATCCGACAAGCGATTCCTGATTTTACTTTTAACTTTTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTc                          <  1:3134725/99‑1 (MQ=255)
                                                                            cAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCTACAATGCCCGGAAGCGATACGAAataatag                         >  2:2000379/1‑96 (MQ=255)
                                                                             aaGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                        <  1:1216058/100‑1 (MQ=255)
                                                                             aaGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                        <  2:3345770/100‑1 (MQ=255)
                                                                              aGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGt                       <  1:245687/100‑1 (MQ=255)
                                                                               gcgcCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGTGATACGAAATATTCGGTc                      <  2:3767503/100‑1 (MQ=255)
                                                                                cgccgcATTTGACAAGCGATGTTTTATGTGTCGTTTAATGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCt                     <  1:1940256/100‑1 (MQ=255)
                                                                                  ccgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTAc                   >  1:1133222/1‑100 (MQ=255)
                                                                                     taTCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGt                <  2:402604/99‑1 (MQ=255)
                                                                                       tCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTATTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGttt              <  1:3744723/100‑1 (MQ=255)
                                                                                        ccGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTa             >  1:3213931/1‑100 (MQ=255)
                                                                                         cGACCAGCGATGCCTGATGTGACGTCTAACGTGTCTTATCAGCCCTACTGATGACCGACAATGCCCGGAAGCGATACGATATATCCCCTCTACGGTCTaa            >  2:793241/1‑100 (MQ=255)
                                                                                           aCAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaaa          >  1:3311602/1‑100 (MQ=255)
                                                                                            cAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAg         >  1:25178/1‑100 (MQ=255)
                                                                                            cAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTAACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAg         >  1:48364/1‑100 (MQ=255)
                                                                                              aGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGAt       >  1:1938543/1‑100 (MQ=255)
                                                                                              aGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGAt       <  1:2290144/100‑1 (MQ=255)
                                                                                              aGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGAt       >  1:3819555/1‑100 (MQ=255)
                                                                                               gCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtgatcccgtaggcctg      <  1:1431939‑M2/100‑63 (MQ=255)
                                                                                               gCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATa      >  1:2603945/1‑100 (MQ=255)
                                                                                               gCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATa      <  2:2627934/100‑1 (MQ=255)
                                                                                                  aTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgata   <  1:1004204‑M2/100‑66 (MQ=255)
                                                                                                  aTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCTTACGGGTGACCTACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACg   <  2:1030782/100‑1 (MQ=255)
                                                                                                  aTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAc    <  1:869785/99‑1 (MQ=255)
                                                                                                   tGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGa  >  2:536275/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGA  >  NC_000913/762792‑762990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.