New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 762891NA (NA)5 (0.040) 5/164 NT NA noncoding (130/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 762924 NA (NA)noncoding (163/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 184 total aligned reads displayed.

CTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTAC  >  NC_000913/762825‑763023
                                                                                                   |                                                                                                   
cTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGC                                                                                                     <  1:1224841‑M2/100‑1 (MQ=255)
cTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGC                                                                                                     >  2:2601155‑M2/1‑100 (MQ=255)
 ttATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGcc                                                                                                    <  1:2979934/100‑1 (MQ=255)
     cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACg                                                                                                >  1:3902100/1‑100 (MQ=255)
     cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACg                                                                                                >  1:2117396/1‑100 (MQ=255)
       ggCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggn                                                                                              <  2:36028/100‑2 (MQ=255)
       ggCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggg                                                                                              <  2:1621395/100‑1 (MQ=255)
       ggCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggg                                                                                              >  1:1989289/1‑100 (MQ=255)
       ggCATACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggg                                                                                              <  2:2056328/100‑1 (MQ=255)
        gCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCTGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggg                                                                                              <  1:1008856/99‑1 (MQ=255)
        gCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGt                                                                                             >  1:2826065/1‑100 (MQ=255)
         ccTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTg                                                                                            >  2:1949331/1‑100 (MQ=255)
           tACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAc                                                                                          >  2:3725589/1‑100 (MQ=255)
            aCGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAcc                                                                                         <  2:3123063/100‑1 (MQ=255)
            aCGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAcc                                                                                         <  2:3335100/100‑1 (MQ=255)
                gACCACCAATGTAGGTCGGATAAGACGAAAGCGCCGCATCCGACAAGAGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACa                                                                                     >  2:1940440/1‑100 (MQ=255)
                    accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATTCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACaa                                                                                    <  1:3674509/97‑1 (MQ=255)
                    accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGc                                                                                 >  2:1436432/1‑100 (MQ=255)
                    accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCATGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGc                                                                                 >  2:1714151/1‑100 (MQ=255)
                     ccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGcc                                                                                >  1:1375622/1‑100 (MQ=255)
                     ccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGcc                                                                                >  1:89365/1‑100 (MQ=255)
                     ccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGcc                                                                                >  1:1759685/1‑100 (MQ=255)
                     ccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCATATCAGGCCTACGGGTGACCGACAATGcc                                                                                >  1:3194656/1‑100 (MQ=255)
                     ccaATGTAGGTCGGATAAGACGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGcc                                                                                >  2:1871029/1‑100 (MQ=255)
                       aaTGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCg                                                                              <  1:1969415/100‑1 (MQ=255)
                         tGTAGGTCGGATAAGGCGCAAGCGCCGCAGCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGa                                                                            <  2:1173288/100‑1 (MQ=255)
                            aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCTGGCCTACTGTTGACCGACAATGCCCGGAAg                                                                          <  2:1078713/99‑1 (MQ=255)
                            aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGc                                                                         <  1:490130/100‑1 (MQ=255)
                             ggTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCg                                                                        <  1:802064/100‑1 (MQ=255)
                             ggTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAACGACAATGCCCGGAAGCg                                                                        >  1:3811144/1‑100 (MQ=255)
                              gccGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGa                                                                       >  1:1792477/3‑100 (MQ=255)
                              gTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGa                                                                       >  1:930985/1‑100 (MQ=255)
                               tCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGAt                                                                      <  1:3043287/100‑1 (MQ=255)
                                  gATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACg                                                                   >  2:3590631/1‑100 (MQ=255)
                                  gATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACg                                                                   >  2:3039520/1‑100 (MQ=255)
                                     aaGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGaaa                                                                <  2:3144184/100‑1 (MQ=255)
                                      aGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAat                                                               >  1:3440482/1‑100 (MQ=255)
                                         cgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGCCGTTTAACGTGTCTTATCAAGCCTACGGGTAACCGACAATGCCCGGAAGCGATACGAAatat                                                             >  1:3093168/1‑99 (MQ=255)
                                         cgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATAtt                                                            >  2:2451227/1‑100 (MQ=255)
                                           cAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCTACAATGCCCGGAAGCGATACGAAataatag                                                          >  2:2000379/1‑96 (MQ=255)
                                           cAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCg                                                          <  1:2865975/100‑1 (MQ=255)
                                           cAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCg                                                          <  1:2620752/100‑1 (MQ=255)
                                            aaGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGTGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                                                         <  2:2603196/100‑1 (MQ=255)
                                            aaGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                                                         <  1:3347246/100‑1 (MQ=255)
                                            aaGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                                                         <  2:3345770/100‑1 (MQ=255)
                                             aGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                                                         <  1:862367/99‑1 (MQ=255)
                                               ccgatcttCCGACATGCGATGCCTGATGTGACGTTTAACGTGTTTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCt                                                      <  1:1059164/93‑1 (MQ=39)
                                                gccgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTAATCAGGCCTACGGTTTAAAGACAATACGCGGAAGCGATACTAAatct                                                             >  2:2289156/1‑90 (MQ=37)
                                                 ccgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTAc                                                    >  1:1133222/1‑100 (MQ=255)
                                                   gcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACgg                                                  <  1:1701958/100‑1 (MQ=255)
                                                    taTCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGt                                                 <  2:402604/99‑1 (MQ=255)
                                                      tCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGttt                                               <  1:2473932/100‑1 (MQ=255)
                                                        cGACCAGCGATGCCTGATGTGACGTCTAACGTGTCTTATCAGCCCTACTGATGACCGACAATGCCCGGAAGCGATACGATATATCCCCTCTACGGTCTaa                                             >  2:793241/1‑100 (MQ=255)
                                                        cGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaa                                             >  1:3752729/1‑100 (MQ=255)
                                                        cGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaa                                             >  1:1302164/1‑100 (MQ=255)
                                                         gACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaa                                            >  2:2917491/1‑100 (MQ=255)
                                                          aCAAGCGATGCCTGATGTGACGTTTAACGTGTTTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaaa                                           <  1:2434711/100‑1 (MQ=255)
                                                          aCAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaaa                                           >  1:3311602/1‑100 (MQ=255)
                                                             aGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGAt                                        >  1:3819555/1‑100 (MQ=255)
                                                             aGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGAt                                        >  1:1938543/1‑100 (MQ=255)
                                                              gCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtgatcccgtaggcctg                                       <  1:1431939‑M2/100‑63 (MQ=255)
                                                               cGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatcccacatacattggtggtcccgtaggtctg                                       <  1:1296243‑M2/99‑63 (MQ=255)
                                                               cGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATaa                                      <  2:1486186/100‑1 (MQ=255)
                                                                 aTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgata                                    <  1:1004204‑M2/100‑66 (MQ=255)
                                                                 aTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAc                                     <  1:869785/99‑1 (MQ=255)
                                                                  tGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGa                                   <  2:2151579/100‑1 (MQ=255)
                                                                  tGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGa                                   >  2:536275/1‑100 (MQ=255)
                                                                   gCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGAt                                  <  2:450654/100‑1 (MQ=255)
                                                                     cTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTa                                >  2:634851/1‑100 (MQ=255)
                                                                     cTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTa                                <  1:534274/100‑1 (MQ=255)
                                                                      tGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTAc                               >  2:827391/1‑100 (MQ=255)
                                                                      tGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAAGATTa                                <  2:892005/99‑1 (MQ=255)
                                                                      tGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTAGGTCTACGGTTTAAAAGATAACGATTAc                               >  1:2706852/1‑100 (MQ=255)
                                                                          gtgACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCACGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGaa                           >  1:2910984/1‑100 (MQ=255)
                                                                           tgACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAg                          <  2:1272883/100‑1 (MQ=255)
                                                                           tgACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATCCGGTCTACGGTTTAAAAGATAACGATTACTGAAg                          <  1:3548625/100‑1 (MQ=255)
                                                                            gACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAgg                         <  2:2693991/100‑1 (MQ=255)
                                                                               cgatctcGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATg                      <  1:3054837/94‑1 (MQ=255)
                                                                                 ttAACGTGTCTTATCAGGCCTACGGGTGACCGTCAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGa                    <  2:1049237/100‑1 (MQ=255)
                                                                                  tAACGGGTCTTGTGAGGCGGACGGGTGAGCGAGGATGCGGGGAAGCGATGCGAAATATGCGGGCTACGGTTTAAAAGATAACGATTACTGAAGGATGGAc                   <  2:3853884/100‑1 (MQ=255)
                                                                                     cGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGa                <  1:3730530/100‑1 (MQ=255)
                                                                                       tgtCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAac              <  1:2568368/100‑1 (MQ=255)
                                                                                        gtCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAaca             >  2:3913912/1‑100 (MQ=255)
                                                                                          cTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAAcaca           <  1:1856899/100‑1 (MQ=255)
                                                                                          cTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAAcaca           >  1:3218937/1‑100 (MQ=255)
                                                                                           ttATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACAt          <  2:1375607/100‑1 (MQ=255)
                                                                                              tCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGaa       >  1:906192/1‑100 (MQ=255)
                                                                                               cAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaat      >  2:3185835‑M2/1‑5 (MQ=255)
                                                                                               cAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAAc      >  2:2645481/1‑100 (MQ=255)
                                                                                               cAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAAc      <  1:1912490/100‑1 (MQ=255)
                                                                                               cAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAAc      >  2:206839/1‑100 (MQ=255)
                                                                                                aGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt     <  1:1575592‑M2/100‑97 (MQ=255)
                                                                                                aGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACt     >  1:1923654/1‑100 (MQ=255)
                                                                                                 ggCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaattg    <  2:1198848‑M2/100‑98 (MQ=255)
                                                                                                 ggCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaattg    <  2:908811‑M2/100‑98 (MQ=255)
                                                                                                 ggCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACtt    <  2:1477840/100‑1 (MQ=255)
                                                                                                  gCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTa   <  2:3392761/100‑1 (MQ=255)
                                                                                                  gCCTACGGGTGACCGACAATGACCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTa   <  1:404228/100‑1 (MQ=255)
                                                                                                   ccTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTAc  >  1:2242983/1‑100 (MQ=255)
                                                                                                   catcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaagcctgataagacacgtaaacgtcacatcagacatcaa       <  1:1630363‑M2/95‑95 (MQ=255)
                                                                                                   |                                                                                                   
CTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTAC  >  NC_000913/762825‑763023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.