New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 792267NA (NA)9 (0.070) 6/164 NT NA noncoding (4/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 792297 NA (NA)noncoding (34/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 147 total aligned reads displayed.

TATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAA  >  NC_000913/792168‑792366
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tATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTg                                                                                                     <  2:3137189/100‑1 (MQ=255)
  tGCTCGATTAAGTGATTATAAATCAGAGGTTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTg                                                                                                     <  1:1246880/98‑1 (MQ=255)
  tGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgc                                                                                                   >  1:3858435‑M1/1‑98 (MQ=255)
  tGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgc                                                                                                   <  1:1478060‑M1/100‑3 (MQ=255)
    cgcgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccg                                                                                                 <  1:3928140‑M1/100‑5 (MQ=255)
      cgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccgga                                                                                               <  2:2108304‑M1/100‑7 (MQ=255)
      cgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccg                                                                                                 <  2:3478299‑M1/98‑5 (MQ=255)
         ttAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGagag                                                                                            <  1:1403382/100‑1 (MQ=255)
          tAAGTGATTATAAAACAAAGGGTTTATGAATGATTGAGCTTTTTATCTGAAAAAAGAAGCGGTTTCATGCCTGGATGCGTCGAACCGGTTGCCGAagag                                                                                            >  2:729109/1‑99 (MQ=255)
           aaGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAggg                                                                                          <  1:204442/100‑1 (MQ=255)
           aaGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAggg                                                                                          >  1:3647162/1‑100 (MQ=255)
            aGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGt                                                                                         >  1:3078511/1‑100 (MQ=255)
             gTGATTATAAAACAGAGTGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGt                                                                                         <  2:865615/99‑1 (MQ=255)
             gTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGATGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGt                                                                                         >  2:3747746/1‑99 (MQ=255)
             gTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTg                                                                                        >  2:1193997/1‑100 (MQ=255)
             gTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTg                                                                                        <  1:2860565/100‑1 (MQ=255)
              tGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGc                                                                                       <  2:482971/100‑1 (MQ=255)
              tGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCATTGGCCGGAGAGGGTGc                                                                                       <  2:2102845/100‑1 (MQ=255)
               gATTATAAAACAGAGGGTATATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGATTCATGCCTGCATGAGTCGAACCGTTGGCCGGAGAGGGTGCt                                                                                      >  2:3221177/1‑100 (MQ=255)
                aTTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCt                                                                                      >  2:3753137/1‑99 (MQ=255)
                aTTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTa                                                                                     <  1:1665217/100‑1 (MQ=255)
                  tataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAg                                                                                   >  1:2477385/1‑100 (MQ=255)
                   ataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAgg                                                                                  >  2:3437251/1‑100 (MQ=255)
                   ataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAgg                                                                                  >  1:3142264/1‑100 (MQ=255)
                    taAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTa                                                                                     >  2:2260226/1‑96 (MQ=255)
                      aaaCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccc                                                                               <  1:2537562‑M1/100‑23 (MQ=255)
                        aCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCC                                                                             >  1:2100773‑M2/1‑100 (MQ=255)
                            agGGTTTATGAATGATTTCTCTTTTTATTTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCG                                                                         >  1:3633993‑M2/1‑100 (MQ=255)
                             gggTTTATGGATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGG                                                                        >  1:2333448‑M2/1‑100 (MQ=255)
                             gggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGG                                                                        >  2:1893903‑M2/1‑100 (MQ=255)
                             gggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGG                                                                        >  1:3019106‑M2/1‑100 (MQ=255)
                              ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGC                                                                       <  2:3381040‑M2/100‑1 (MQ=255)
                              ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTAATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGGTAAGGCCGCCTCCGGC                                                                       <  2:3189660‑M2/100‑1 (MQ=255)
                               gTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggagccggccttagcaccgtctccggc                                                                       <  2:2272407‑M1/99‑31 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaac                                                                   <  1:3306324‑M1/100‑35 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAgg                                                                   <  1:2720289/100‑1 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAgg                                                                   <  2:3078483/100‑1 (MQ=255)
                                   atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaacg                                                                  <  2:532136‑M1/100‑36 (MQ=255)
                                   atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaacg                                                                  <  2:1940718‑M1/100‑36 (MQ=255)
                                       atgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGc                                                              <  1:2837289/100‑1 (MQ=255)
                                        tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                             <  1:1873644/100‑1 (MQ=255)
                                        tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                             <  1:871060/100‑1 (MQ=255)
                                            tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGACCGGAAAGAGAGATAAGGCCGCCTCCGGCAAGGTCAGCACTAc                                                         >  1:1045022/1‑100 (MQ=255)
                                            tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGAACAAAAAAAGAGCTAAGGACGCCTCCAGCAAGGTCAGCACTAc                                                         >  1:1020618/1‑100 (MQ=255)
                                             gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        <  2:2896654/100‑1 (MQ=255)
                                             gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        <  1:2026347/100‑1 (MQ=255)
                                             gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        >  1:1725642/1‑100 (MQ=255)
                                             gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        >  1:1576190/1‑100 (MQ=255)
                                             gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        >  2:1754659/1‑100 (MQ=255)
                                              cgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGTACTACCg                                                       <  1:2048140/100‑1 (MQ=255)
                                              cgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCg                                                       <  1:1043964/100‑1 (MQ=255)
                                               gcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTTCCGa                                                      >  2:1072454/1‑100 (MQ=255)
                                                cTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGAc                                                     <  2:1755043/100‑1 (MQ=255)
                                                cTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGAc                                                     >  1:427712/1‑100 (MQ=255)
                                                   tttATCTGAAAAAAGACGCGGTTTTATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                  <  2:1424071/100‑1 (MQ=255)
                                                    ttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCaa                                                 <  2:2773648/100‑1 (MQ=255)
                                                       tatGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                  <  2:3194070/94‑1 (MQ=255)
                                                       tCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatat                                              >  2:3929031/1‑100 (MQ=255)
                                                       tCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatat                                              <  1:3304253/100‑1 (MQ=255)
                                                        cTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatata                                             >  2:2538531/1‑100 (MQ=255)
                                                         tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                            >  2:2428167/1‑100 (MQ=255)
                                                          gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                            >  2:3608378/1‑99 (MQ=255)
                                                           aaaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGAGTACTAAGACCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAttt                                          >  1:1150417/1‑100 (MQ=255)
                                                            aaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                         >  2:1458794/1‑100 (MQ=255)
                                                              aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGTCAAGGTCAGCACTACCGACTCAATATATTTTTg                                       <  2:1467621/100‑1 (MQ=255)
                                                              aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                       <  2:227833/100‑1 (MQ=255)
                                                                aGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTc                                     <  2:2251678/100‑1 (MQ=255)
                                                                aGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCACCTCCGGCAAGGTCAACACTACCGACTCAATATATTTTTGTc                                     >  1:716267/1‑100 (MQ=255)
                                                                 gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtc                                    <  1:314044‑M2/100‑36 (MQ=255)
                                                                  aCGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAg                                   >  1:3318910/1‑100 (MQ=255)
                                                                  aCGCGGTTTCATGCCGTCATGCGTCGAACCGTTGGGCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGTTCTTCCGACTCAATATATTTTTGTCAg                                   <  2:368279/100‑1 (MQ=255)
                                                                   cgcgGTTTCATGCCTGTATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                    <  1:670025/98‑1 (MQ=255)
                                                                   cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGc                                  <  2:2761176/100‑1 (MQ=255)
                                                                   cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGATCAGCACTACCGACTCAATATATTTTTGTCAGc                                  >  1:3415848/1‑100 (MQ=255)
                                                                      ggTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGcaca                               >  1:1929102/1‑100 (MQ=255)
                                                                           cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                          >  2:3679162/1‑100 (MQ=255)
                                                                              gCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTTAATATATTTTTGTCAGCACATAGCGATa                       <  2:190858/100‑1 (MQ=255)
                                                                              gCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATa                       >  1:461969/1‑100 (MQ=255)
                                                                               ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATag                      >  1:977539/1‑100 (MQ=255)
                                                                               ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAAGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATa                       >  2:2604108/1‑99 (MQ=255)
                                                                                ccgCATGCGTCGAACCGTTCGCCGGAGGGGTTGCTAAGGCCGCCTCCTGCAAGGTCAGCACTACCTACTCAATCTATTTTTGTCAGCACACAGCGAt                        <  2:2911509/95‑1 (MQ=255)
                                                                                 tGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATagag                    >  2:3028919/1‑100 (MQ=255)
                                                                                       cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAcc              >  2:2883529/1‑100 (MQ=255)
                                                                                         tCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCaaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatc            <  1:1576806‑M2/100‑60 (MQ=255)
                                                                                         tCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGt            >  2:3356097/1‑100 (MQ=255)
                                                                                          cGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATagatcggaagagc           >  1:978496/1‑90 (MQ=255)
                                                                                          cGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGt            >  1:9970/1‑99 (MQ=255)
                                                                                           gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc          >  1:2192162/1‑100 (MQ=255)
                                                                                           gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc          <  2:2840205/100‑1 (MQ=255)
                                                                                           gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc          >  1:3281149/1‑100 (MQ=255)
                                                                                            aaCCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCg         >  1:3615556/1‑100 (MQ=255)
                                                                                             aCCGTTGGCCGGAGATGGTGCTAAGGCCGTGTTCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCg         <  1:1395508/99‑1 (MQ=255)
                                                                                             aCCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCg         >  2:1288641/1‑99 (MQ=255)
                                                                                              ccGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGc       <  1:1601279/100‑1 (MQ=255)
                                                                                               cGTTGGTCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcat      <  1:1454557‑M2/100‑66 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcat      <  2:1940718‑M2/100‑66 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcat      <  2:532136‑M2/100‑66 (MQ=255)
                                                                                                gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcataaaaacgagtcttttttaagataaaaagcgcaatcattcata     <  1:153387‑M2/100‑67 (MQ=255)
                                                                                                 ttGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACg    <  1:777788/100‑1 (MQ=255)
                                                                                                   ggCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGaa  >  1:3690378/1‑100 (MQ=255)
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TATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAA  >  NC_000913/792168‑792366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.