New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 900799NA (NA)8 (0.060) 6/164 NT NA noncoding (51/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 900831 NA (NA)noncoding (83/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 158 total aligned reads displayed.

GGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGC  >  NC_000913/900700‑900897
                                                                                                   |                                                                                                  
ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCTCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                                                                    >  2:139111/1‑100 (MQ=255)
 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                                                                    >  1:3554166/1‑99 (MQ=255)
   cAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtc                                                                                                 <  1:2320785‑M1/100‑4 (MQ=255)
       ttAGTGTGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtc                                                                                                 <  1:1138313‑M1/96‑4 (MQ=255)
       ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgat                                                                                             >  1:1795508‑M1/1‑93 (MQ=255)
       ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgat                                                                                             <  2:1129730‑M1/100‑8 (MQ=255)
        tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                                                                            >  1:996417/1‑100 (MQ=255)
        tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                                                                            >  1:2082620/1‑100 (MQ=255)
         aGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                                                                           >  1:3130565/1‑100 (MQ=255)
          gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCg                                                                                          <  2:2929741/100‑1 (MQ=255)
          gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGACGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCg                                                                                          >  2:3333680/1‑100 (MQ=255)
          gTGGGTTGTCCGTCTTCACTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCg                                                                                          <  2:190508/100‑1 (MQ=255)
            gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                                                                        >  1:221700/1‑100 (MQ=255)
              gTTGTCCGTCTTCACTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGc                                                                                      <  2:2669023/100‑1 (MQ=255)
              gTTGTCCGTCATCTTTATCACATTTTATTCGCTTTGTAGGCTGTATAAGTGATCCCCGCCGTATCCGGCATATTCATCGTGCTGATGTCTggtttga                                                                                         <  2:1604623/97‑7 (MQ=255)
                  tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                                  <  1:2919045/100‑1 (MQ=255)
                  tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                                  <  2:3813238/100‑1 (MQ=255)
                  tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                                  >  2:701707/1‑100 (MQ=255)
                  tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                                  >  2:738314/1‑100 (MQ=255)
                   ccGTCTTCATTATAAGATTTTATGCACTTTGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcn                                                                                 <  1:1933018/100‑2 (MQ=255)
                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                                 >  1:2237544/1‑100 (MQ=255)
                     tcttccgatctaAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                                                               <  1:1315181/90‑1 (MQ=255)
                      tCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGt                                                                              >  1:1184314/1‑100 (MQ=255)
                        ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                                            <  1:1882673/100‑1 (MQ=255)
                        ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                                            <  1:3018833/100‑1 (MQ=255)
                           aTTATAAGAATTTATGTACTATGTTGGCCGGATAAGGCGTCTCCGCCGCATCCGGGACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTAT                                                                         >  1:408363‑M2/1‑100 (MQ=255)
                           aTTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTAT                                                                         <  1:2952450‑M2/100‑1 (MQ=255)
                            ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATC                                                                        >  1:151414‑M2/1‑100 (MQ=255)
                            ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATC                                                                        <  2:2774201‑M2/100‑1 (MQ=255)
                            ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATC                                                                        >  1:2547110‑M2/1‑100 (MQ=255)
                            ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATC                                                                        >  1:2674972‑M2/1‑100 (MQ=255)
                              ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcag                                                                      <  2:3536092‑M1/100‑31 (MQ=255)
                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagac                                                                    <  1:3009314‑M1/100‑33 (MQ=255)
                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagac                                                                    <  1:1253727‑M1/100‑33 (MQ=255)
                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAC                                                                    <  1:2238845‑M2/100‑1 (MQ=255)
                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                                   >  2:3289581/1‑100 (MQ=255)
                                  gAATTTATGCACTATGTAGGCCGGTTAAGGCGTCCCCGCCGCGTCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAC                                                                    <  1:2737191‑M2/98‑1 (MQ=255)
                                   aaTTTATGCACTATGTAGGCCGGATAAGGCGTCTCCGCTGTATCTGGCATAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatc                                                                 <  1:300855‑M1/100‑36 (MQ=255)
                                       tATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaa                                                             <  1:3868766/100‑1 (MQ=255)
                                          gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc                                                          >  1:1421847/1‑100 (MQ=255)
                                           cACTCTGTAGGCCGGATAAGGCGTCCCCGCCCCATCCGGCACAGGCACCGTGCTGATGTCGGATGCGACGCTGGCGCTTTTTATCAGACCTACAAAAccc                                                         <  2:1293775/100‑1 (MQ=38)
                                           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                                         >  1:1204330/1‑100 (MQ=255)
                                           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACACTGGCGCGTCTTATAAGACCTACAAAAcc                                                          >  1:3320441/1‑99 (MQ=255)
                                            aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccc                                                        <  1:1852306/100‑1 (MQ=255)
                                              tATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccccc                                                      <  2:747935/100‑1 (MQ=255)
                                                 gTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGc                                                   <  2:3116565/100‑1 (MQ=255)
                                                  tAGGCTGGATAAGGCGCCCCCGCCGTATCCGTAATAGGCACCGTGTTGATGTCTCATTCGACGCTGGCGCGTTTTATTAGTCCTACAAAACCCCCCGGCg                                                  <  2:1931219/100‑1 (MQ=255)
                                                   aGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGa                                                 <  2:2873357/100‑1 (MQ=255)
                                                      ccGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGTCCTACAAAACCCCCCGGCGAATg                                              <  2:3746850/100‑1 (MQ=255)
                                                      ccGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                                              <  2:3437065/100‑1 (MQ=255)
                                                      ccGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                                              >  1:3253337/1‑100 (MQ=255)
                                                        ggATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTa                                            <  2:1752993/100‑1 (MQ=255)
                                                        ggATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTa                                            <  2:1684181/100‑1 (MQ=255)
                                                        ggATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTa                                            <  1:2510544/100‑1 (MQ=255)
                                                          aTAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTa                                            <  1:2781779/98‑1 (MQ=255)
                                                          aTAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTAc                                           <  2:777709/99‑1 (MQ=255)
                                                           tAAGGCGTCCCCGCCGCATCCGGCACAGTCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGc                                         <  1:3831041/100‑1 (MQ=255)
                                                           tAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGc                                         <  2:1397722/100‑1 (MQ=255)
                                                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                                       >  2:3089067/1‑100 (MQ=255)
                                                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                                       >  1:3836638/1‑100 (MQ=255)
                                                               gCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGcc                                     >  2:1495911/1‑100 (MQ=255)
                                                                   ccccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCTAATGTACGCAGCCACAt                                 >  2:2854662/1‑100 (MQ=255)
                                                                    cccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAtt                                >  2:2456198/1‑100 (MQ=255)
                                                                    cccGCCGCATCCGGCACAGGCAACGAGCTGATGTATGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCACCGGCGAATGTACGCAGCCACAtt                                >  2:2360194/1‑100 (MQ=38)
                                                                      cgccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAAACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTaa                              >  1:1137082/1‑100 (MQ=255)
                                                                        ccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAAtt                            <  1:2460723/100‑1 (MQ=255)
                                                                          gcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTc                          <  1:3650058/100‑1 (MQ=255)
                                                                          gcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACATACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTc                          >  1:3679711/1‑100 (MQ=255)
                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGTGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                         <  1:1410445/100‑1 (MQ=255)
                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTaa                              >  1:1075108/1‑95 (MQ=255)
                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                         <  2:3634195/100‑1 (MQ=255)
                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                         <  2:3090729/100‑1 (MQ=255)
                                                                           attCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCAACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                         >  1:3529409/3‑100 (MQ=255)
                                                                            aTCCGGCACAGGCACCGTGCTGATGTCTGATGTGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                         <  1:315684/99‑1 (MQ=255)
                                                                            aTCCGGCACAGGCACCGTGCTGATGTCTGATGCTACGCTTGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGc                        <  1:239985/100‑1 (MQ=255)
                                                                            aTCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTTGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                         <  1:3626080/99‑1 (MQ=255)
                                                                            aTCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGc                        <  2:2435842/100‑1 (MQ=255)
                                                                              ccGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGcc                       >  1:975734/1‑99 (MQ=255)
                                                                              ccGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg                      >  1:1883543/1‑100 (MQ=255)
                                                                                  cacaGGCACCGTGCTGATGTCTGATTCGACGCTGTCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg                  <  1:60663/100‑1 (MQ=255)
                                                                                  cacaGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg                  <  2:2902638/100‑1 (MQ=255)
                                                                                   acaGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGa                 <  1:1018081/100‑1 (MQ=255)
                                                                                    caGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAACCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGaa                >  1:3093130/1‑100 (MQ=255)
                                                                                     aGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAAt               <  1:701716/100‑1 (MQ=255)
                                                                                     aGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAAt               >  2:3452291/1‑100 (MQ=255)
                                                                                      ggCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGCATg              >  1:2679980/1‑100 (MQ=255)
                                                                                      ggCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATg              >  1:662654/1‑100 (MQ=255)
                                                                                      ggCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATg              >  2:46305/1‑100 (MQ=255)
                                                                                       gCACCGTGCTGATGTATGATGCGACGCTAGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGAACGCAGCAACATTAATTTCGCCGTTAGAAt               >  2:162775/1‑98 (MQ=37)
                                                                                        cACCGTGCTGATGTCTGATGCTACGCTTGCTCTTCTTATTAGACCTACAAAACCTCCCGGCGTATGTATTCAGCCACATTAATTTCGCCCTTCGAATGcc            <  2:691475/100‑1 (MQ=255)
                                                                                              gCTGATGTCTGATGCGACGCTGGCGCGTCTTATAAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataa      <  2:1552758‑M2/100‑63 (MQ=255)
                                                                                               cTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaa     <  1:1338440‑M2/100‑64 (MQ=255)
                                                                                               cTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCtt     <  1:1389560/100‑1 (MQ=255)
                                                                                                tGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagatcggaaga    <  2:3421484‑M2/100‑65 (MQ=255)
                                                                                                tGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACACAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCttt    >  1:87102/1‑100 (MQ=255)
                                                                                                tGATATCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaat    <  1:398832‑M2/100‑65 (MQ=255)
                                                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAgcgcaaag   <  2:1829060/100‑5 (MQ=255)
                                                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATATACGCAGACACAATAATTTAACCGTTCAAATGCAAGCGATTTg   >  1:617691/1‑100 (MQ=25)
                                                                                                  aTGTCTGATGCGACGCTGGCGCGTCTTATCAGACTTACAAATCCCCCCGGCGAATGTACGCAGCAACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgc  <  1:1151979/100‑1 (MQ=255)
                                                                                                  aTGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgc  <  2:2237410/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGC  >  NC_000913/900700‑900897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.