New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1508794 =NA (NA)7 (0.050) 4/166 NT NA noncoding (4/33 nt) REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 1508825 = NA (NA)intergenic (+83/+9) ydcP/yncJ putative peptidase/uncharacterized protein

Only 100 of 152 total aligned reads displayed.

GTAAGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAACC  >  NC_000913/1508695‑1508893
                                                                                                   |                                                                                                   
gTAAGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATtgcct                                                                                                     >  2:3084826/1‑100 (MQ=255)
  gcgtgctgtggcggaagagtcggcggaaggtttgcgcgagcatttttactggcaaaaatcgcgcaaaccagaagcgggacaacgttgagtcatttgaTGc                                                                                                   <  2:2473895‑M1/3‑1 (MQ=255)
  gcgtgctgtggcggaagagtcggcggaaggtttgcgcgagcatttttactggcaaaaatcgcgcaaaccagaagcgggacaacgttgagtcatttgaTGc                                                                                                   <  1:429560‑M1/3‑1 (MQ=255)
  aaGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATtgcctgc                                                                                                   >  1:2408197/1‑100 (MQ=255)
     tCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCgg                                                                                                <  1:3124350/100‑1 (MQ=255)
       cGGATGAGCTGCTGAAAACATTTCCGAAGCGAAAAGGGTAAAACGCCAGTTGTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTTCCGGGt                                                                                              >  2:1742595/1‑100 (MQ=255)
       cGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGt                                                                                              <  1:3117576/100‑1 (MQ=255)
        ggATGAGCTGCTGAAAAAATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGt                                                                                              <  2:3462584/99‑1 (MQ=255)
        ggATGAGATGCTGAAAACATTGCCGAAGCGAAAAGGGTAAATCGACAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTa                                                                                             <  1:3771804/100‑1 (MQ=255)
            gAGCTGCTAAAAACATTGTCGAAGGTAAAAGGGTAAACCGCAAGTTTTCTAGTTACTCACAACTTATTGAATCTGCATAATATtgcctgcc                                                                                                  <  2:2476627/91‑1 (MQ=255)
               ttccgatctaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGt                                                                                       <  2:3451101/90‑1 (MQ=255)
                 gctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAc                                                                                    >  2:3765580/1‑100 (MQ=255)
                 gctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAc                                                                                    >  1:3044290/1‑100 (MQ=255)
                  ctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcg                                                                                   >  2:3213963/1‑100 (MQ=255)
                  ctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcg                                                                                   >  1:661640/1‑100 (MQ=255)
                   tgAAAACATTGCCGAAGCGAAAAGGGTAATACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgc                                                                                  <  1:1749455/100‑1 (MQ=255)
                    gAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgcc                                                                                 <  1:3491621/100‑1 (MQ=255)
                     aaaaCATTGTCGAAGCGAAAAGGGTAGAACTCCAGTTTTTTGGTTACTCACAACTTATTGAATGTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgcc                                                                                 <  1:897868/99‑1 (MQ=255)
                     aaaaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTTAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgccg                                                                                <  2:2709164/100‑1 (MQ=255)
                      aaaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgccgc                                                                               <  2:22782/100‑1 (MQ=255)
                       aaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgccg                                                                                >  2:156259/1‑98 (MQ=255)
                        aCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGtagaacggaag                                                                             >  1:3451140/1‑90 (MQ=255)
                         cATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATc                                                                            >  1:3256233/1‑100 (MQ=255)
                          aTTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATcc                                                                           <  2:1917809/100‑1 (MQ=255)
                          aTTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGATGCGGCGTAAcgccttaccc                                                                           <  2:2041322/100‑7 (MQ=38)
                            tGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCgg                                                                         <  1:2485563/100‑1 (MQ=255)
                            tGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCgg                                                                         <  2:3220168/100‑1 (MQ=255)
                            tGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCgg                                                                         >  2:1557107/1‑100 (MQ=255)
                            tGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCATGACGAGTAAGGAGTTACGCAGCATCCgg                                                                         >  1:551554/1‑100 (MQ=255)
                             gCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACATTTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGc                                                                        <  1:988720/100‑1 (MQ=255)
                              ccGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCa                                                                       <  1:464337/100‑1 (MQ=255)
                              ccGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCa                                                                       <  2:671203/100‑1 (MQ=255)
                              ccGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATATGCATGATATTTCCTGCCGGGTAAGGCGTTAAGCCGCATCCGGCa                                                                       >  2:3317822/1‑100 (MQ=255)
                               cGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCAt                                                                      >  1:1858221/1‑100 (MQ=255)
                               cGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCAt                                                                      <  1:2983938/100‑1 (MQ=255)
                                 aaGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCaggc                                                                    <  2:429512/100‑4 (MQ=255)
                                  aGCGAAAAGGGTAAAACGCTAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCaa                                                                   >  1:3642862/1‑100 (MQ=255)
                                  aGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCaa                                                                   <  1:305867/100‑1 (MQ=255)
                                   gcgcgagcatttttactggcaaaaatcgcgcaaaccagaagcgggacaacgttgagtcatttgaTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCaaa                                                                  >  1:2099832‑M1/65‑100 (MQ=255)
                                    cgcgagcatttttactggcaaaaatcgcgcaaaccagaagcgggacaacgttgagtcatttgaTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAAt                                                                 >  1:1709258‑M1/64‑100 (MQ=255)
                                    cGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAAt                                                                 >  1:2492296/1‑100 (MQ=255)
                                     gAAAAGTGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAAt                                                                 <  1:3897856/99‑1 (MQ=255)
                                      cgagcatttttactggcaaaaatcgcgcaaaccagaagcgggacaacgttgagtcatttgaTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATg                                                                >  1:3906124‑M1/62‑99 (MQ=255)
                                          nggTAAAACGCCAGTTATCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGAATCa                                                           >  2:1190601/2‑100 (MQ=255)
                                            gTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAc                                                         >  1:3199759/1‑100 (MQ=255)
                                            gTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAc                                                         <  1:3133492/100‑1 (MQ=255)
                                             tAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAc                                                         >  1:2781077/1‑99 (MQ=255)
                                             tAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACg                                                        <  2:496486/100‑1 (MQ=255)
                                             tAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACg                                                        <  1:977193/100‑1 (MQ=255)
                                              aaaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGt                                                       <  2:3576340/100‑1 (MQ=255)
                                              aaaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGt                                                       >  1:210629/1‑100 (MQ=255)
                                               aaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGtt                                                      >  1:2380168/1‑100 (MQ=255)
                                                  cGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTc                                                   >  2:80928/1‑100 (MQ=255)
                                                     cAGTGTTCTGGTTACTCACAACTTATTGGATCTGCATGATATGGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTg                                                     <  2:1084244/95‑1 (MQ=255)
                                                      atttttCTGGTTACTCACAACTTATTGAATCTGCTTGATATTGCCTGCCGGTTAAGTCGTTACGCCGCATCCGTCATCAAATGACTCAACGTTGTc                                                   <  2:2652769/94‑1 (MQ=255)
                                                      aGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGc                                               >  1:3021204/1‑100 (MQ=255)
                                                         tttCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTc                                            <  1:2850466/100‑1 (MQ=255)
                                                          ttCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCt                                           <  1:403973/100‑1 (MQ=255)
                                                          ttCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCt                                           <  2:3369150/100‑1 (MQ=255)
                                                            cTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTgg                                         <  2:324289/100‑1 (MQ=255)
                                                             tGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGt                                        <  1:864408/100‑1 (MQ=255)
                                                                ttACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTg                                     <  1:1364991/100‑1 (MQ=255)
                                                                  tcTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTgc                                    <  2:1367118/98‑1 (MQ=255)
                                                                   cTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGTCGTTACGCCGCATCCGGCAACAAATGACACAACGTTGTCCCAATTCTAGTTTacg                                   >  1:1546227/1‑99 (MQ=255)
                                                                   cTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTgcgc                                  <  1:2222424/100‑1 (MQ=255)
                                                                   cTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTgcgc                                  >  2:360763/1‑100 (MQ=255)
                                                                   cTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTgcgc                                  >  2:3029566/1‑100 (MQ=255)
                                                                    tCACAACTTATTGAATCTGCATGATATTGTCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTgcgc                                  <  1:1929474/99‑1 (MQ=255)
                                                                     cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTgcagat                                >  1:1367133/1‑96 (MQ=255)
                                                                     cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGa                                >  2:1978843/1‑100 (MQ=255)
                                                                     cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGa                                >  2:355872/1‑100 (MQ=255)
                                                                      acaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAt                               >  2:2447204/1‑100 (MQ=255)
                                                                      acaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAt                               >  1:446422/1‑100 (MQ=255)
                                                                       caACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAtt                              >  2:3172386/1‑100 (MQ=255)
                                                                         aCTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAtttt                            <  1:1337305/100‑1 (MQ=255)
                                                                         aCTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGATTTGCGCGAtttt                            >  1:3694229/1‑100 (MQ=255)
                                                                          cTTATTGAATCTGCATGATATTGCCTGTCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAttttt                           <  1:3495911/100‑1 (MQ=255)
                                                                          cTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGTATCCGGCATCACATGACTCAACGTTGTCCCTCTTCTGGTTTGCGCGAttt                             <  2:1297650/98‑1 (MQ=255)
                                                                           ttATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAttttcg                          <  1:2636016/100‑3 (MQ=255)
                                                                           ttATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTg                          >  1:1814598/1‑100 (MQ=255)
                                                                            tATTGAATTTGGCTGATGTTGCCTGTCGGTTAATGCGGTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTg                          <  2:2042754/99‑1 (MQ=255)
                                                                             aTTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGcc                        <  1:2744502/100‑1 (MQ=255)
                                                                               tccgatctcATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAg                      <  1:3622665/92‑1 (MQ=255)
                                                                               tGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAg                      >  2:708165/1‑100 (MQ=255)
                                                                                  aTCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaa                   >  1:117617/1‑100 (MQ=255)
                                                                                  aTCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaa                   >  2:2789441/1‑100 (MQ=255)
                                                                                   tCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaaa                  <  1:1677989/100‑1 (MQ=255)
                                                                                    cTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaaaa                 >  1:1799269/1‑100 (MQ=255)
                                                                                     tGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaaaaa                <  1:2247329/100‑1 (MQ=255)
                                                                                      gCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAAt               <  2:446416/100‑1 (MQ=255)
                                                                                      gCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTCGATTGCGCGATTTTTGCCAGTAAAAAt               >  1:2604015/1‑100 (MQ=255)
                                                                                           atatTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTcg          >  1:1433823/1‑100 (MQ=255)
                                                                                               tgcctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCAAGTAAAAATGCTCGCGCa      >  2:518018/1‑100 (MQ=255)
                                                                                               tgcctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTACCGCTTCTGTATTGCGCGATTTTTGCCAGTAAAAATCCTCGCGCa      >  2:566230/1‑100 (MQ=255)
                                                                                                 cctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCaaa    >  1:659903/1‑100 (MQ=255)
                                                                                                 cctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAAGCTGTCCCGCTTCTTGTTTGAGCCATTTTTGCCAGTAAAAATGCTCGCGCaa     >  2:3177070/1‑99 (MQ=255)
                                                                                                  ctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAAc   >  2:1754955/1‑100 (MQ=255)
                                                                                                  ctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAAc   <  2:1967763/100‑1 (MQ=255)
                                                                                                  ctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAAc   <  1:1389150/100‑1 (MQ=255)
                                                                                                   TGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCgcaaagc  <  2:2020248‑M1/100‑3 (MQ=255)
                                                                                                   |                                                                                                   
GTAAGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAACC  >  NC_000913/1508695‑1508893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.