| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2282890 | NA (NA) | 8 (0.060) | 7/164 | NT | NA | noncoding (4/34 nt) | REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 2282920 | NA (NA) | noncoding (34/34 nt) | REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
Only 100 of 208 total aligned reads displayed.
TTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGC > NC_000913/2282791‑2282988 | ttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAg > 2:1949827/1‑100 (MQ=255) gcgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcc > 1:1001734‑M1/1‑97 (MQ=255) gcgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcc < 2:3113424‑M1/100‑4 (MQ=255) cgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcca > 1:1100438‑M1/1‑96 (MQ=255) cgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcca < 2:1302710‑M1/100‑5 (MQ=255) cgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcca > 1:3400845‑M1/1‑96 (MQ=255) cTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccaga > 2:1283155‑M1/1‑94 (MQ=255) cTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccaga < 1:762834‑M1/100‑7 (MQ=255) tAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATa > 1:558079/1‑100 (MQ=255) tAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTAAGGTATTGCTATTTTTTGCAAGCAAGATa > 1:472771/1‑100 (MQ=255) cTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCTGGCCAGAT‑AGGCGtt > 2:2604730/1‑100 (MQ=255) cTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGt > 1:2096769/1‑100 (MQ=255) tGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGtt > 2:2937160/1‑100 (MQ=255) gAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTc > 2:446653/1‑100 (MQ=255) atctAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTc < 1:2710331/97‑1 (MQ=255) aGTTGTAAAAGACCCCGCTCCT‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTAATTACGGTATTGTTAGTTTTTGCAGGCCAGATAAGGCGTTCAcgcc < 2:2571626/100‑1 (MQ=255) aGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTAACTGAAAATTATGCCTGATTACGGTATTTCTATTTTTTTCAGGCCAGATAAGGCGTTCAcgcc > 2:748111/1‑100 (MQ=38) gTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgcct > 2:1420784‑M1/1‑78 (MQ=255) gTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAAGCGTTCAcgcc > 1:523502/1‑99 (MQ=255) gTTGTAAAAAACCCCACTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg > 1:3165445/1‑100 (MQ=255) ttGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccgc > 1:3854201/1‑100 (MQ=255) tGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCA < 1:2252166‑M2/100‑1 (MQ=255) tGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCA < 2:542949‑M2/100‑1 (MQ=255) gTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAATGCTATTTTTTACAGGCCAGATAAGGCGTTCACGCCGCAT < 1:2197666‑M2/100‑1 (MQ=255) gTAAAAAACCCCGCTCCG‑GCGGGGATTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCAT < 2:1863586‑M2/100‑1 (MQ=255) tAAAAAACCCCGCTCCG‑GCGGGGTCTTTTGTATCTGCAGATTATGCCTGATTACGGCATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCA < 2:3166686‑M2/98‑1 (MQ=255) aaaaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCT < 1:1822464‑M2/100‑1 (MQ=255) aaaaaaCCCCGCTCCG‑GCGGGGATTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCT < 2:965109‑M2/100‑1 (MQ=255) aaaaaaCCCCGCTCCG‑GCGGGGAATATTGTATCTGCAGATTATGCCTGATTACGGTATAGCTATTTTTTGCAGTCCAGCTAAGGCGTTCACGCCGCATC < 2:615988‑M2/99‑1 (MQ=255) aaaaaaCCCCGC‑CGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCT < 1:1440923‑M2/100‑1 (MQ=255) aaaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATGTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTG < 1:2648589‑M2/100‑1 (MQ=255) aaaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctg < 1:1420799‑M1/100‑29 (MQ=255) ccccGCTTCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggcct < 1:869353‑M1/99‑33 (MQ=255) ccccGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggcctg < 1:313871‑M1/100‑34 (MQ=255) ccccGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATGCGGCGTGAACGCCTTATCTGGCct > 1:2541732‑M2/1‑97 (MQ=255) ccGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa < 2:833028/100‑1 (MQ=255) tCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac > 2:1227925/1‑100 (MQ=255) tCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac < 1:418963/100‑1 (MQ=255) tCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac < 1:3550772/100‑1 (MQ=255) cg‑gcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac < 2:1358163/98‑1 (MQ=255) gcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggcctgcaaaaaatag < 1:472550‑M1/100‑44 (MQ=255) cggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaa < 2:3324923/99‑1 (MQ=255) gggTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAc < 1:2937186/100‑1 (MQ=255) gggTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCACATCTGGCATTCAGAACACAAAAc > 2:486655/1‑100 (MQ=255) gtttgtttGTATGTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAGAAcc < 2:3420960/95‑1 (MQ=38) ggTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAc < 1:444986/99‑1 (MQ=255) gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg < 1:2025369/100‑1 (MQ=255) gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCACATCTGGCATTCAGAACACAAAACCg > 1:334986/1‑100 (MQ=255) tttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAt > 1:649711/1‑100 (MQ=255) tATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTg > 2:138018/1‑100 (MQ=255) aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTg > 2:3469379/1‑99 (MQ=255) tCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑c < 1:3788506/100‑1 (MQ=255) cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cg > 2:1111321/1‑100 (MQ=255) cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cg > 1:3055109/1‑100 (MQ=255) tGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAATGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgc > 2:2429932/1‑100 (MQ=255) tGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgc < 2:239154/100‑1 (MQ=255) gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgcc > 2:3636706/1‑100 (MQ=255) gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgcc < 1:1665361/100‑1 (MQ=255) cAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCa > 1:1938711/1‑100 (MQ=255) aTTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCATGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGAc < 1:987076/100‑1 (MQ=255) aTTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGAc < 1:1244012/100‑1 (MQ=255) ttATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACg < 1:3636745/100‑1 (MQ=255) aTGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTc < 1:3241385/100‑1 (MQ=255) ccTGATTACGGTATTGCTATTTTTTGTATTTTAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTcc > 2:3038614/1‑98 (MQ=38) ccTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCTATTAATTGC‑‑CGCCAGACGTCCgg < 2:3474895/100‑1 (MQ=255) ccTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCgg > 1:2526127/1‑100 (MQ=255) ccTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGACTAATTGC‑‑CGCCAGACGTCCg < 1:3694911/99‑1 (MQ=255) ccTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAACGATTAATTGC‑‑CGCCAGACATCAgg > 1:261064/1‑100 (MQ=255) cTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgc > 1:1699753/1‑100 (MQ=255) tGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgcg > 1:1368020/1‑100 (MQ=255) gATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgcgc < 1:2142230/100‑1 (MQ=255) gATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgcgc < 1:906690/100‑1 (MQ=255) tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGc < 1:833483/100‑1 (MQ=255) ggTATTGCTATTTTTTTCAGTCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTACAACGCTGCact > 2:2063518/1‑98 (MQ=37) ggTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAACCCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGc < 2:1577749/97‑1 (MQ=255) ggTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCAGCGCCGGACGTCTGgcggcaat < 2:3806535/100‑6 (MQ=25) gTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAAtt > 2:1186366/1‑100 (MQ=255) tATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTg > 1:1122668/1‑100 (MQ=255) tATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTg > 2:2255879/1‑100 (MQ=255) aTTGCTATTTTTTGCAGGCCAGATAAGTCGTTCACGCCTCATCTGGCATTCAGAACACAAAACCGATTACTTGC‑‑CGCCAGACGTCCGGCGCTGCAATTgg < 2:520196/100‑1 (MQ=255) aTTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTgg < 1:2881824/100‑1 (MQ=255) ttGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCAGCGCCGGACGTCTGgcggcaattaa < 1:1522650/99‑9 (MQ=25) gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg > 2:2859668/1‑100 (MQ=255) gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg < 2:2712390/100‑1 (MQ=255) gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg > 2:855726/1‑100 (MQ=255) gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg > 1:3303083/1‑100 (MQ=255) gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAATGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg > 1:1174000/1‑100 (MQ=255) tATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcgcg > 2:2893601/1‑100 (MQ=255) aTTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTTGCATTCAGAACACAAAACCCATTAATTCA‑‑CGCCAGATGTCCGGCGCTGCAATTGGTcgcg > 1:723894/1‑99 (MQ=38) aTTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCgcgc < 2:1433554/100‑1 (MQ=255) ttttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCaaa > 1:2801930/1‑100 (MQ=255) tttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAAt < 1:2772615/100‑1 (MQ=255) cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcgggg < 1:2358978‑M2/100‑68 (MQ=255) cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgaagataaaaaaaacaccgccagagagggg < 1:245647‑M2/100‑68 (MQ=255) cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑AGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcgg > 1:2691282/1‑100 (MQ=255) aGGCCAGATAAGGCGTTCACGCCGCATCTGGCctacgaaccgacgataacttaacgatcccagtaagactcttccaggctgtcttcacgctccggcaagc < 2:937530‑M2/100‑69 (MQ=255) aGGCCAGATAAGGCGTTCACGCCGCATCTGGCctacgaaccgacgataacttaacgatcccagtaagactcttccaggctgtcttcacgctccggcaa < 1:3758942‑M2/98‑67 (MQ=255) ggccagataaggcgttcacgccgcatctggcctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggtt > 2:336172‑M1/1‑1 (MQ=255) ggCCAGATAAGGCGTTCACGCCTTATCTGGCctacgaaccgacgataacttaacgatcccagtaagactcttccaggctgtcttcacgctccggcaagcc < 2:3769614‑M2/100‑70 (MQ=255) ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc > 1:1580381/1‑99 (MQ=255) | TTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGC > NC_000913/2282791‑2282988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |