New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3943467 =NA (NA)36 (0.280) 12/166 NT 48.5% noncoding (33/76 nt) gltU tRNA‑Glu
?NC_000913 3943474 = 41 (0.290)noncoding (40/76 nt) gltU tRNA‑Glu

Only 100 of 106 total aligned reads displayed.

CTCACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGT  >  NC_000913/3943375‑3943573
                                                                                                   |                                                                                                   
cgaagatgagttttgagatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagg                                                                                                     >  1:3255309‑M2/100‑100 (MQ=255)
cTCACACAGATTGTCTGATAGGAATTGAATAGCAAGTCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcg                                                                                                     <  1:133008/100‑1 (MQ=255)
  cacacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                                                                                                   >  1:3851465/1‑100 (MQ=33)
  cacacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                                                                                                   <  2:3629128/100‑1 (MQ=32)
  cacacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                                                                                                   >  1:496538/1‑100 (MQ=33)
  cacacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                                                                                                   >  2:1737763/1‑100 (MQ=33)
  cacacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                                                                                                   >  2:1741811/1‑100 (MQ=32)
  cacacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGAAGACTGATACGTCCACTTCGTCTATAGGCCCAGGACACCGCCCTTTCAcggc                                                                                                   >  2:866720/1‑100 (MQ=255)
  cacacaGATTGTCTGATAGGAAGTGAAAAGAAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcgg                                                                                                    >  2:2812846/1‑99 (MQ=17)
  aagatgagttttgagatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagGGc                                                                                                   <  1:3640414‑M2/3‑1 (MQ=255)
  aagatgagttttgagatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagGGc                                                                                                   <  2:361781‑M2/3‑1 (MQ=255)
    gatgagttttgagatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagGGCgg                                                                                                 <  1:1503025‑M2/5‑1 (MQ=255)
    gatgagttttgagatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagGGCgg                                                                                                 <  2:3204854‑M2/5‑1 (MQ=255)
    gatgagttttgagatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggagattcgaacccctgttaccgccgtgaaagGGCgg                                                                                                 >  1:126955‑M2/96‑100 (MQ=255)
    gatgagttttgacatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgatcccctgttaccgccgtgaaagGGCgg                                                                                                 <  2:1812208‑M2/5‑1 (MQ=255)
    ctcaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggctg                                                                                                 <  1:2647021/98‑3 (MQ=18)
    cacaGTTTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                                                                                                   <  1:2928317/98‑1 (MQ=17)
    cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcgg                                                                                                 >  1:3879989/1‑100 (MQ=33)
    cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcgg                                                                                                 >  1:3880051/1‑100 (MQ=33)
    cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcgg                                                                                                 <  2:2982956/100‑1 (MQ=33)
    cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcgg                                                                                                 <  1:214432/100‑1 (MQ=32)
    cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTATTGCGAAGCAGATTGATACGTCCCATTCGTCTAGAGTCCCATGACACCGCCCTTTCAcggc                                                                                                   >  2:3058051/1‑98 (MQ=11)
     atgagttttgagatattaaggcaggtgactttcattcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagGGCGGt                                                                                                <  2:515877‑M2/6‑1 (MQ=255)
     acaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGt                                                                                                <  2:1960804/100‑1 (MQ=33)
      tgagttttgagatattaaggcaggtgactttcactcacaaaccagcaagtggagtcccataggagattcgaacccctgttaccgccgtgaaagGGCgg                                                                                                 >  2:2801871‑M2/94‑98 (MQ=255)
      caGTTTGTCTGGTAGGAAGTGAAAAGCTAGGCGTCTTGCGAATTAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTa                                                                                               <  1:3276411/100‑1 (MQ=11)
      caGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcggag                                                                                               >  2:2646997/1‑98 (MQ=18)
      caGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTa                                                                                               <  2:981841/100‑1 (MQ=33)
         aTTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACa                                                                                            >  2:2360608/1‑100 (MQ=33)
          ttttgatatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccctttcacGGCGGTAACa                                                                                            <  2:1999969‑M2/10‑1 (MQ=255)
          ttGTCTGATAGGAAGTGAAAAGCAATGCGTCTTGCGAAGCAGACCGATACGTCCTCTTCGTCTAGAGGCTCAGGACACCGCCCTTTCACGGCGATAACAg                                                                                           <  2:371430/100‑1 (MQ=11)
          ttGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCTCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAg                                                                                           <  2:1723738/100‑1 (MQ=18)
          ttGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAg                                                                                           <  2:2538299/100‑1 (MQ=32)
           tttgagatattaaggcatgtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccctttcacGGCGGTAACAgg                                                                                          <  1:2871126‑M2/12‑1 (MQ=255)
           tGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAg                                                                                           >  1:2897349/1‑99 (MQ=33)
            gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAggg                                                                                         <  2:2240534/100‑1 (MQ=33)
             tgagatattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccctttcacGGCGGTAACAgggg                                                                                        <  1:961793‑M2/14‑1 (MQ=255)
             tCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAgggg                                                                                        >  2:728062/1‑100 (MQ=32)
              cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGGCTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt                                                                                       >  1:319083/1‑100 (MQ=18)
              cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAAAGACCCAGAACACCAAACTTTCACGGCGGTAACAGGAGt                                                                                       >  1:144520/1‑100 (MQ=11)
              cTGATAGGAAGTGAAAAGCAAAGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAAGACACCGCCCTTTCACGGCGGTAACAgggga                                                                                       >  2:2151796/1‑99 (MQ=12)
               tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGtt                                                                                      <  2:2856893/100‑1 (MQ=32)
                gATAGGAAGTGAATAGCAAGGCGTCTTGCGAAGCAGACTGATACGTACCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc                                                                                     <  1:3532153/100‑1 (MQ=12)
                gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc                                                                                     <  1:2868082/100‑1 (MQ=32)
                 atattaaggcaggtgactttcactcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccctttcacGGCGGTAACAGGGGTTCg                                                                                    <  1:2501052‑M2/18‑1 (MQ=255)
                 aTAGGAAGTGGAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg                                                                                    <  2:542240/100‑1 (MQ=18)
                 aTAGGAAGTGAAAAGCAAGTCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg                                                                                    <  1:3797045/100‑1 (MQ=17)
                 aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg                                                                                    <  2:2436084/100‑1 (MQ=33)
                 aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg                                                                                    <  1:1441317/100‑1 (MQ=33)
                 aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg                                                                                    <  2:1790851/100‑1 (MQ=33)
                  tAGGAAGTGAAAAGTAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg                                                                                    <  1:1517193/99‑1 (MQ=17)
                  tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa                                                                                   >  1:2349261/1‑100 (MQ=32)
                  tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa                                                                                   >  2:3334675/1‑100 (MQ=32)
                  tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa                                                                                   >  1:3427435/1‑100 (MQ=32)
                   aGGAATTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGACCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa                                                                                  >  2:1721052/1‑100 (MQ=12)
                   aGGAAGTGAAAAGCAAGGCGTCTTGCGAATCAGACTGATACGTCCCCTTCGTCTAAAGGACCAGGACACCGCCCTTTCACGGCGGGAACAGGGGTTCGaa                                                                                  >  1:2126036/1‑100 (MQ=11)
                   aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCATGGCGGTAACAGGGGTTCGaa                                                                                  <  2:3567162/100‑1 (MQ=17)
                   aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa                                                                                  >  2:3155147/1‑100 (MQ=32)
                   aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCACAGGACACCGCCCCTTCACGGCGGTAACAGGGGTTCGaa                                                                                  >  2:3388084/1‑100 (MQ=12)
                    ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAt                                                                                 >  2:637374/1‑100 (MQ=31)
                    ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAt                                                                                 >  1:3751972/1‑100 (MQ=31)
                     taaggcaggtgactttcactcacaaaccagcaagtggcgttccctaggggattcgaacccctgttaccgccctttcacGGCGGTAACAGGGGTTCGAATc                                                                                <  1:1388754‑M2/22‑1 (MQ=255)
                     gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc                                                                                >  1:3101504/1‑100 (MQ=11)
                     gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc                                                                                >  1:2135976/1‑100 (MQ=11)
                     gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc                                                                                <  2:2908299/100‑1 (MQ=11)
                     gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc                                                                                >  1:1332587/1‑100 (MQ=11)
                                                                        ttcgaacccctgttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGtgaaagtcgccgacctcaat                             >  1:1007989‑M2/28‑91 (MQ=255)
                                                                           gaacccctgttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTActat                           >  1:2680661‑M2/25‑99 (MQ=255)
                                                                                cctgttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa                     >  1:1841971‑M2/20‑100 (MQ=255)
                                                                                 ctgttaccgccgtgaaagGGCGGTGACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa                    >  1:3346893‑M2/19‑100 (MQ=255)
                                                                                  tgttaccgccgtgaaagTGCGGTAACAGGGGATCGAATCCAATAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCTTTAATATCTCAAAAc                   >  2:586402‑M2/18‑100 (MQ=255)
                                                                                  tgttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc                   >  1:476387‑M2/18‑100 (MQ=255)
                                                                                   gttaccgccgtgaaagGGCGGTGACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAAAaca                  >  1:562275‑M2/17‑99 (MQ=255)
                                                                                   gttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc                   >  2:1261926‑M2/17‑99 (MQ=255)
                                                                                   gttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt                  >  2:1102865‑M2/17‑100 (MQ=255)
                                                                                   gttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt                  >  1:3587047‑M2/17‑100 (MQ=255)
                                                                                   gttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTACTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAAAaca                  >  1:2968146‑M2/17‑99 (MQ=255)
                                                                                    ttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTc                 >  2:684815‑M2/16‑100 (MQ=255)
                                                                                    ttaccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCAGACCTCAATATCTCAAaacag                 >  1:2923115‑M2/16‑98 (MQ=255)
                                                                                     taccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTTGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa                >  2:2752546‑M2/15‑100 (MQ=255)
                                                                                     taccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAaaacaga                >  2:1132422‑M2/15‑97 (MQ=255)
                                                                                     taccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa                >  2:1216586‑M2/15‑100 (MQ=255)
                                                                                     taccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa                >  1:297314‑M2/15‑100 (MQ=255)
                                                                                     taccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa                >  2:3431371‑M2/15‑100 (MQ=255)
                                                                                     taccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa                >  1:3236061‑M2/15‑100 (MQ=255)
                                                                                     taccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGACTTAATATATCAAAACTCa                >  1:118288‑M2/15‑100 (MQ=255)
                                                                                      accgccgtgagagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGACACTTGCTGGTTTGTGAGTGAAAGTCACCGGCCTTAATATCTGAAAACTCa                >  2:3181494‑M2/14‑99 (MQ=255)
                                                                                      accgccgtgaaagGGCGGTGACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCaaaacagac               >  2:1995275‑M2/14‑96 (MQ=255)
                                                                                      accgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCAt               >  1:3027357‑M2/14‑100 (MQ=255)
                                                                                      accgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCaaaacagac               >  1:696619‑M2/14‑96 (MQ=255)
                                                                                      accgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt               >  1:761934‑M2/14‑100 (MQ=255)
                                                                                      accgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt               >  2:152753‑M2/14‑100 (MQ=255)
                                                                                      accgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt               >  1:2695909‑M2/14‑100 (MQ=255)
                                                                                      accgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTAAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt               >  1:1686219‑M2/14‑100 (MQ=255)
                                                                                      accgcagtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTGAAAACTCAt               >  2:94793‑M2/14‑100 (MQ=255)
                                                                                       ccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCaaaacagac               >  1:771747‑M2/13‑95 (MQ=255)
                                                                                       ccgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATc              >  1:1889047‑M2/13‑100 (MQ=255)
                                                                                        cgccgtgaaagGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCCCCTGCCTTACTATCTCAAAACTCATCt             >  2:3000389‑M2/12‑100 (MQ=255)
                                                                                                   GGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGt  >  2:685481‑M2/1‑100 (MQ=255)
                                                                                                   GGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGGGAAAGTAACCTGCGTTAATATCTCAAAACTCATCTGCggg        >  2:2752981‑M2/1‑94 (MQ=255)
                                                                                                   |                                                                                                   
CTCACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGT  >  NC_000913/3943375‑3943573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.